Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI39706 Sapria himalayana HOM05D000222 ORTHO05D011388 1.4e-30 135.6 66 100.0
SHI41159 Sapria himalayana HOM05D010388 ORTHO05D011388 3.7e-15 84.3 72 59.7
SHI37060 Sapria himalayana HOM05D000222 ORTHO05D011388 6.3e-15 83.6 63 65.1
SHI37702 Sapria himalayana HOM05D000222 ORTHO05D011388 6.3e-15 83.6 63 65.1
SHI36235 Sapria himalayana HOM05D000222 ORTHO05D011388 1.6e-13 79.0 60 66.7
SHI37158 Sapria himalayana HOM05D000222 ORTHO05D000329 1.6e-13 79.0 60 63.3
SHI27275 Sapria himalayana HOM05D000222 ORTHO05D000329 3.9e-12 74.3 79 53.2
SHI39797 Sapria himalayana HOM05D010388 ORTHO05D011388 1.1e-11 72.8 77 54.5
SHI40516 Sapria himalayana HOM05D000222 ORTHO05D011388 1.5e-11 72.4 56 66.1
SHI37792 Sapria himalayana HOM05D000222 ORTHO05D000329 2.5e-11 71.6 84 46.4
SHI38079 Sapria himalayana HOM05D010388 ORTHO05D011388 1.2e-10 69.3 79 49.4
SHI38137 Sapria himalayana HOM05D010388 ORTHO05D011388 1.2e-10 69.3 79 49.4
SHI42154 Sapria himalayana HOM05D000222 ORTHO05D000329 2.8e-10 68.2 57 61.4
SHI38891 Sapria himalayana HOM05D000222 ORTHO05D000329 3.6e-10 67.8 56 62.5
SHI41071 Sapria himalayana HOM05D000222 ORTHO05D011388 3.6e-10 67.8 54 64.8
Oeu046282.1 Olea europaea HOM05D000222 ORTHO05D000329 1.0e-09 66.2 57 59.6
Hma1.2p1_0733F.1_g210310 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 1.8e-09 65.5 57 59.6
SHI35686 Sapria himalayana HOM05D000222 ORTHO05D000329 1.8e-09 65.5 61 55.7
SEGI_06170 Sequoiadendron giganteum HOM05D000222 ORTHO05D000329 1.8e-09 65.5 57 59.6
Atru.chr13.271 Acer truncatum HOM05D000222 ORTHO05D000329 2.3e-09 65.1 57 59.6
HanXRQChr13g0387091 Helianthus annuus HOM05D000222 ORTHO05D000329 2.3e-09 65.1 57 59.6
Lj4C22T9 Lonicera japonica HOM05D000222 ORTHO05D000329 2.3e-09 65.1 57 59.6
SHI08058 Sapria himalayana HOM05D000222 ORTHO05D000329 2.3e-09 65.1 57 56.1
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 3.1e-09 64.7 57 57.9
CBR_g34543 Chara braunii HOM05D000222 ORTHO05D000329 3.1e-09 64.7 57 59.6
Migut.C00851 Erythranthe guttata HOM05D000222 ORTHO05D000329 3.1e-09 64.7 57 57.9
Lj4C798T7 Lonicera japonica HOM05D000222 ORTHO05D000329 3.1e-09 64.7 57 57.9
Pp3c14_3360 Physcomitrium patens HOM05D000222 ORTHO05D000329 3.1e-09 64.7 57 56.1
Aqoxy1G02465 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 4.0e-09 64.3 57 59.6
Aqoxy6G02232 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 4.0e-09 64.3 57 59.6
ECA233G5047 Erigeron canadensis HOM05D000222 ORTHO05D000329 6.8e-09 63.5 57 57.9
Lsat_1_v5_gn_8_30781 Lactuca sativa HOM05D000222 ORTHO05D000329 6.8e-09 63.5 57 57.9
SHI37359 Sapria himalayana HOM05D000222 ORTHO05D011388 6.8e-09 63.5 67 49.3
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 6.8e-09 63.5 57 57.9
BcaC09g50898 Brassica carinata HOM05D000222 ORTHO05D000329 8.9e-09 63.2 57 57.9
BolC1t01873H Brassica oleracea HOM05D000222 ORTHO05D000329 8.9e-09 63.2 72 50.0
Dinv39529 Davidia involucrata HOM05D000222 ORTHO05D000329 8.9e-09 63.2 57 57.9
Lalb_Chr03g0033421 Lupinus albus HOM05D000222 ORTHO05D000329 8.9e-09 63.2 57 57.9
Lalb_Chr19g0131441 Lupinus albus HOM05D000222 ORTHO05D000329 8.9e-09 63.2 57 57.9
Nitab4.5_0000337g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 8.9e-09 63.2 57 57.9
Peaxi162Scf00553g00114 Petunia axillaris HOM05D000222 ORTHO05D000329 8.9e-09 63.2 57 57.9
SalBow8G4062 Salvia bowleyana HOM05D000222 ORTHO05D000329 8.9e-09 63.2 57 56.1
SHI03598 Sapria himalayana HOM05D010388 ORTHO05D369370 8.9e-09 63.2 67 50.7
Sc15g0004910 Simmondsia chinensis HOM05D000222 ORTHO05D000329 8.9e-09 63.2 57 57.9
Medtr1g025430 Medicago truncatula HOM05D000222 ORTHO05D000329 1.2e-08 62.8 57 54.4
TAR536G0015 Trochodendron aralioides HOM05D000222 ORTHO05D000329 1.2e-08 62.8 57 54.4
Zm00001eb331810 Zea mays HOM05D000222 ORTHO05D000329 1.2e-08 62.8 57 57.9
AagrBONN_evm.TU.Sc2ySwM_344.3459 Anthoceros agrestis HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 54.4
A03p55100 Brassica napus HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 57.9
C01p19440 Brassica napus HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 56.1
BraA03t14570Z Brassica rapa HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 57.9
CSS0018705 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 56.1
DCAR_023014 Daucus carota HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 56.1
MBI05_g33509_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 56.1
Hund05159 Selenicereus undatus HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 57.9
Zm00001eb025010 Zea mays HOM05D000222 ORTHO05D011388 1.5e-08 62.4 57 57.9
Zm00001eb239320 Zea mays HOM05D000222 ORTHO05D011388 1.5e-08 62.4 57 57.9
Zm00001eb272290 Zea mays HOM05D000222 ORTHO05D000329 1.5e-08 62.4 57 57.9
Zm00001eb346330 Zea mays HOM05D000222 ORTHO05D011388 1.5e-08 62.4 57 57.9
Zm00001eb356570 Zea mays HOM05D000222 ORTHO05D011388 1.5e-08 62.4 57 57.9
Aa31sc288G10 Aethionema arabicum HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
arahy.Tifrunner.gnm1.ann1.P8FSM4 Arachis hypogaea HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
arahy.Tifrunner.gnm1.ann1.T76A9L Arachis hypogaea HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
EL10Ac1g02175 Beta vulgaris HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
AUR62040542 Chenopodium quinoa HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
AUR62041482 Chenopodium quinoa HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
PSO541G0316 Papaver somniferum HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 54.4
PSO675G6717 Papaver somniferum HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 54.4
Psat6g002360 Pisum sativum HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
Sabra05G0186600 Salix brachista HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
Sc02g0008650 Simmondsia chinensis HOM05D000222 ORTHO05D000329 2.0e-08 62.0 57 56.1
AL7G29090 Arabidopsis lyrata HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
AT4G24190 Arabidopsis thaliana HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
BcaC07g38137 Brassica carinata HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
BcaNung01125 Brassica carinata HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
A01p15520 Brassica napus HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
A08p21570 Brassica napus HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
C07p53420 Brassica napus HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
BolC7t45836H Brassica oleracea HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
BolC8t48563H Brassica oleracea HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
BraA01t01491Z Brassica rapa HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
BraA08t34104Z Brassica rapa HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
CANSAT78G1241 Cannabis sativa HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 54.4
Carub.0007s1690 Capsella rubella HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
Cc10_g01540 Coffea canephora HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 54.4
COL.COLO4_26130 Corchorus olitorius HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
Thhalv10024414m.g Eutrema salsugineum HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
Lalb_Chr08g0246171 Lupinus albus HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 54.4
Nn6g32037 Nelumbo nucifera HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 52.6
Nitab4.5_0003251g0080 Nicotiana tabacum HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
HPP92_012933 Vanilla planifolia HOM05D000222 ORTHO05D000329 2.6e-08 61.6 57 56.1
Actinidia15430 Actinidia chinensis HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 54.4
Cpa.g.sc64.164 Carica papaya HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 54.4
Duzib116G0368 Durio zibethinus HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 54.4
HanXRQChr12g0366871 Helianthus annuus HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 56.1
MBI05_g33510_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 54.4
Nn5g30723 Nelumbo nucifera HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 54.4
Os06g0716700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 56.1
PGR083G1489 Punica granatum HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 54.4
QL02p011881 Quercus lobata HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 54.4
SGA_v2.0_scaffold11G05934 Striga asiatica HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 54.4
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 56.1
TWI56G0657 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 3.4e-08 61.2 57 56.1
ATR0810G217 Amborella trichopoda HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 52.6
ClCG08G014210 Citrullus lanatus HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 54.4
MELO3C011021.2 Cucumis melo HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 54.4
CsaV3_2G029630 Cucumis sativus L. HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 54.4
Migut.N03167 Erythranthe guttata HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 56.1
Eucgr.H00972 Eucalyptus grandis HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 50.9
Glyma.17G258700 Glycine max HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 54.4
Lalb_Chr11g0061831 Lupinus albus HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 54.4
PGSC0003DMG400009940 Solanum tuberosum HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 54.4
TPR.G26394 Trifolium pratense HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 52.6
TAR381G1457 Trochodendron aralioides HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 52.6
TAR628G0053 Trochodendron aralioides HOM05D000222 ORTHO05D000329 4.4e-08 60.8 57 52.6
CARHR231600 Cardamine hirsuta HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 52.6
Duzib093G0379 Durio zibethinus HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
Glyma.14G219700 Glycine max HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
Lj5g0005976 Lotus japonicus HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
MD08G1011200 Malus domestica HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
Phvul.001G005200 Phaseolus vulgaris HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
RhsimUnG0065400 Rhododendron simsii HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
Sp7g22160 Schrenkiella parvula HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
Sed0003929 Sechium edule HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 52.6
vmacro04362 Vaccinium macrocarpon HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
VMungo0647G1547 Vigna mungo HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 54.4
Zm00001eb228120 Zea mays HOM05D000222 ORTHO05D000329 5.8e-08 60.5 57 56.1
MSTRG.25258 Avicennia marina HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 54.4
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 52.6
CDE05G2968 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 52.6
DCAR_013875 Daucus carota HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 54.4
FvH4_2g38300 Fragaria vesca HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 52.6
FAN15G0622 Fragaria x ananassa HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 52.6
FAN27G0624 Fragaria x ananassa HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 52.6
Nitab4.5_0000337g0070 Nicotiana tabacum HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 54.4
RcHm_v2.0_Chr6g0303071 Rosa chinensis HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 52.6
GSVIVG01009931001 Vitis vinifera HOM05D000222 ORTHO05D000329 7.5e-08 60.1 57 54.4
MSTRG.1183 Avicennia marina HOM05D000222 ORTHO05D000329 9.8e-08 59.7 57 54.4
FAN20G2674 Fragaria x ananassa HOM05D000222 ORTHO05D000329 9.8e-08 59.7 57 52.6
Thecc.08G046300 Theobroma cacao HOM05D000222 ORTHO05D000329 9.8e-08 59.7 57 54.4
Gohir.A01G110500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
Gohir.A06G002800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
Gohir.A06G002900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
Gohir.D01G097100 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
Gohir.D06G005800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
Gohir.D06G005900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
Gorai.002G122800 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
Gorai.010G003000 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
Prupe.1G363900 Prunus persica HOM05D000222 ORTHO05D000329 1.3e-07 59.3 57 52.6
SHI39280 Sapria himalayana HOM05D010388 ORTHO05D011388 1.7e-07 58.9 74 47.3
CDE05G1631 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 2.2e-07 58.5 57 50.9
Manes.18G012200 Manihot esculenta HOM05D000222 ORTHO05D000329 2.2e-07 58.5 57 52.6
SMO116G0137 Selaginella moellendorffii HOM05D000222 ORTHO05D000329 2.2e-07 58.5 57 52.6
Ca_13433_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 2.9e-07 58.2 54 53.7
Manes.18G012500 Manihot esculenta HOM05D000222 ORTHO05D000329 2.9e-07 58.2 57 52.6
Cre02.g080650 Chlamydomonas reinhardtii HOM05D000222 ORTHO05D000329 3.7e-07 57.8 57 49.1
Peaxi162Scf00553g00086 Petunia axillaris HOM05D000222 ORTHO05D000329 3.7e-07 57.8 57 52.6
SHI38696 Sapria himalayana HOM05D000222 ORTHO05D000329 3.7e-07 57.8 51 54.9
Solyc04g081570.3 Solanum lycopersicum HOM05D000222 ORTHO05D000329 3.7e-07 57.8 57 52.6
Sopen04g035180 Solanum pennellii HOM05D000222 ORTHO05D000329 3.7e-07 57.8 57 52.6
Mapoly0031s0145 Marchantia polymorpha HOM05D000222 ORTHO05D000329 4.9e-07 57.4 57 50.9
CAN.G311.42 Capsicum annuum HOM05D000222 ORTHO05D000329 6.4e-07 57.0 57 52.6
Glyma.09G109401 Glycine max HOM05D000222 ORTHO05D011388 6.4e-07 57.0 57 50.9
Sed0002325 Sechium edule HOM05D000222 ORTHO05D000329 1.1e-06 56.2 57 50.9
SHI40420 Sapria himalayana HOM05D000222 ORTHO05D000329 1.4e-06 55.8 57 49.1
SHI53350 Sapria himalayana HOM05D000222 ORTHO05D011388 1.9e-06 55.5 57 54.4
SHI28381 Sapria himalayana HOM05D000222 ORTHO05D000329 2.4e-06 55.1 52 53.8
SHI36219 Sapria himalayana HOM05D000222 ORTHO05D000329 3.2e-06 54.7 57 52.6
SHI40500 Sapria himalayana HOM05D000222 ORTHO05D000329 3.2e-06 54.7 57 49.1
Hma1.2p1_0013F.1_g008210 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 4.1e-06 54.3 53 56.6
SHI38014 Sapria himalayana HOM05D000222 ORTHO05D000329 4.1e-06 54.3 26 96.2
SHI45771 Sapria himalayana HOM05D000222 ORTHO05D000329 4.1e-06 54.3 57 52.6
Pp3c8_6510 Physcomitrium patens HOM05D000222 ORTHO05D000329 5.4e-06 53.9 55 49.1
SHI38625 Sapria himalayana HOM05D000222 ORTHO05D000329 5.4e-06 53.9 57 49.1
SHI49673 Sapria himalayana HOM05D000222 ORTHO05D000329 7.0e-06 53.5 53 52.8
SHI38129 Sapria himalayana HOM05D000222 ORTHO05D000329 9.2e-06 53.1 57 47.4


User provided reference genes

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