Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 5.4e-226 787.3 401 100.0
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 1.0e-136 490.7 494 60.1
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 8.4e-86 321.6 354 59.6
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 1.8e-83 313.9 203 81.3
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 1.0e-70 271.6 248 61.3
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 7.9e-68 261.9 378 45.2
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 2.3e-67 260.4 375 45.9
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 2.5e-66 256.9 380 42.6
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 3.3e-66 256.5 379 44.1
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 3.7e-65 253.1 380 44.2
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 1.4e-64 251.1 376 44.1
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 4.1e-64 249.6 378 43.1
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 9.1e-64 248.4 382 44.2
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 9.1e-64 248.4 264 62.1
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 9.1e-64 248.4 264 62.1
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 9.1e-64 248.4 378 42.6
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 2.6e-63 246.9 379 40.9
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 2.6e-63 246.9 380 43.4
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 3.4e-63 246.5 377 42.4
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 5.9e-63 245.7 380 41.6
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 5.9e-63 245.7 382 41.1
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 1.7e-62 244.2 377 42.4
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 2.9e-62 243.4 382 42.4
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 5.0e-62 242.7 374 41.2
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 6.5e-62 242.3 381 43.0
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 8.5e-62 241.9 369 42.5
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 1.1e-61 241.5 378 41.5
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 2.5e-61 240.4 378 42.1
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 3.2e-61 240.0 384 42.2
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 3.2e-61 240.0 381 41.2
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 7.2e-61 238.8 381 41.7
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 7.2e-61 238.8 380 41.6
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 7.2e-61 238.8 378 41.8
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 9.4e-61 238.4 381 40.4
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 9.4e-61 238.4 379 42.2
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 9.4e-61 238.4 382 42.1
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 1.2e-60 238.0 382 41.6
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 1.2e-60 238.0 378 41.0
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 1.2e-60 238.0 378 41.8
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 1.6e-60 237.7 372 39.8
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 4.6e-60 236.1 379 40.9
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 7.9e-60 235.3 382 41.1
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 7.9e-60 235.3 384 40.6
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 7.9e-60 235.3 378 40.5
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 1.4e-59 234.6 384 40.6
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 1.4e-59 234.6 382 40.8
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 1.4e-59 234.6 379 40.6
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 1.8e-59 234.2 380 40.0
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 2.3e-59 233.8 380 40.5
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 3.0e-59 233.4 378 40.7
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 5.1e-59 232.6 383 41.0
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 5.1e-59 232.6 372 41.7
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 5.1e-59 232.6 372 41.7
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 5.1e-59 232.6 378 39.7
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 6.7e-59 232.3 380 42.6
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 6.7e-59 232.3 378 41.0
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 6.7e-59 232.3 380 40.5
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 8.8e-59 231.9 380 40.8
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.1e-58 231.5 380 42.6
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 1.1e-58 231.5 381 41.2
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 2.0e-58 230.7 385 40.5
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 2.6e-58 230.3 381 40.7
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 3.3e-58 229.9 381 41.5
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 4.4e-58 229.6 381 38.6
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 4.4e-58 229.6 381 40.7
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 7.4e-58 228.8 375 41.3
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 7.4e-58 228.8 380 40.5
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 9.7e-58 228.4 384 40.1
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 9.7e-58 228.4 359 42.1
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 9.7e-58 228.4 368 39.7
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 1.3e-57 228.0 384 40.6
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 1.3e-57 228.0 379 41.4
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 1.3e-57 228.0 381 40.2
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.7e-57 227.6 380 41.3
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 2.2e-57 227.3 380 41.6
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 2.2e-57 227.3 380 41.3
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.2e-57 227.3 380 41.3
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 2.8e-57 226.9 385 43.1
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 6.3e-57 225.7 383 40.2
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 8.2e-57 225.3 377 43.5
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 8.2e-57 225.3 198 61.1
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.4e-56 223.8 378 41.0
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 2.4e-56 223.8 381 40.4
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-56 223.8 216 57.4
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 1.2e-55 221.5 375 40.0
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.2e-55 221.5 380 40.8
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-55 221.5 254 51.6
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 1.5e-55 221.1 380 38.4
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 1.5e-55 221.1 381 38.6
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 2.6e-55 220.3 382 38.7
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 5.9e-55 219.2 383 40.2
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 1.0e-54 218.4 382 39.0
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 1.7e-54 217.6 382 40.1
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 1.7e-54 217.6 382 39.0
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 1.7e-54 217.6 377 39.8
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 2.2e-54 217.2 381 38.1
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 8.5e-54 215.3 384 39.3
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 1.1e-53 214.9 375 38.9
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 1.1e-53 214.9 383 37.6
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 1.4e-53 214.5 381 38.3
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 2.5e-53 213.8 374 39.6
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 5.5e-53 212.6 382 38.2
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 5.5e-53 212.6 258 58.5
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 1.2e-52 211.5 381 38.6
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 1.2e-52 211.5 378 39.4
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 1.6e-52 211.1 382 38.0
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 2.1e-52 210.7 365 38.9
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 5.7e-50 202.6 381 39.1
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 7.4e-50 202.2 365 38.4
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 9.7e-50 201.8 341 39.9
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 9.1e-48 195.3 398 34.4
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 1.2e-42 178.3 348 37.4
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 4.4e-42 176.4 294 38.4
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 1.0e-30 138.7 363 29.2
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 1.5e-29 134.8 436 29.4
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 5.5e-29 132.9 359 29.0
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 3.6e-28 130.2 426 29.1
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-26 124.8 192 44.8
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 5.7e-26 122.9 134 53.7
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 1.5e-21 108.2 138 43.5
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 2.3e-19 100.9 92 63.0
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 2.6e-18 97.4 57 84.2
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 6.6e-14 82.8 127 42.5
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 1.5e-10 71.6 331 27.8


User provided reference genes

Program Settings