Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38854 Sapria himalayana HOM05D004911 ORTHO05D005930 4.4e-65 251.1 127 100.0
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 8.1e-51 203.8 122 84.4
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 7.6e-33 144.1 79 91.1
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 4.2e-31 138.3 123 56.1
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 1.6e-30 136.3 123 55.3
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 3.5e-30 135.2 123 55.3
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 2.3e-29 132.5 120 55.0
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 3.9e-29 131.7 120 54.2
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 3.9e-29 131.7 120 58.3
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 5.1e-29 131.3 120 54.2
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 5.1e-29 131.3 120 54.2
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.1e-29 131.3 120 58.3
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.1e-29 131.3 120 58.3
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.1e-29 131.3 120 58.3
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 6.7e-29 131.0 120 55.0
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 8.7e-29 130.6 120 55.0
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 1.1e-28 130.2 129 51.9
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 1.9e-28 129.4 120 55.0
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.9e-28 129.4 120 57.5
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 3.3e-28 128.6 120 55.0
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.3e-28 128.6 120 57.5
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 3.3e-28 128.6 121 53.7
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 5.6e-28 127.9 120 55.0
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.6e-28 127.9 120 57.5
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 5.6e-28 127.9 120 54.2
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 7.4e-28 127.5 120 55.8
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 7.4e-28 127.5 120 54.2
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 7.4e-28 127.5 120 55.0
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 9.6e-28 127.1 120 55.8
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 1.3e-27 126.7 120 55.8
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 1.6e-27 126.3 121 56.2
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 1.6e-27 126.3 123 55.3
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 1.6e-27 126.3 120 56.7
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 2.1e-27 125.9 120 55.0
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 4.8e-27 124.8 123 53.7
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 4.8e-27 124.8 122 52.5
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 6.2e-27 124.4 123 55.3
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 8.2e-27 124.0 120 53.3
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 8.2e-27 124.0 120 55.0
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 8.2e-27 124.0 120 55.0
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 8.2e-27 124.0 120 50.0
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 1.8e-26 122.9 119 53.8
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 1.8e-26 122.9 120 53.3
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 2.4e-26 122.5 120 50.0
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 3.1e-26 122.1 129 51.2
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 3.1e-26 122.1 120 51.7
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 6.9e-26 120.9 120 50.8
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 6.9e-26 120.9 129 54.3
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 9.0e-26 120.6 121 56.2
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 1.2e-25 120.2 120 50.8
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 1.5e-25 119.8 120 55.0
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 3.4e-25 118.6 120 50.0
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 4.5e-25 118.2 120 47.5
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 5.8e-25 117.9 120 51.7
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 1.7e-24 116.3 121 50.4
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 2.2e-24 115.9 120 49.2
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 2.9e-24 115.5 121 53.7
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 3.8e-24 115.2 120 49.2
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 1.4e-23 113.2 120 48.3
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 1.9e-23 112.8 120 50.8
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 5.5e-23 111.3 121 45.5
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 7.1e-23 110.9 120 47.5
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 7.1e-23 110.9 122 47.5
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 1.2e-22 110.2 120 47.5
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 1.6e-22 109.8 120 47.5
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 2.1e-22 109.4 123 48.8
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 2.7e-22 109.0 120 50.0
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 3.5e-22 108.6 120 45.0
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 6.0e-22 107.8 120 46.7
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 7.9e-22 107.5 120 48.3
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 1.0e-21 107.1 120 45.0
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 1.3e-21 106.7 120 45.0
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 2.3e-21 105.9 120 44.2
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 3.9e-21 105.1 118 50.8
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 3.9e-21 105.1 120 44.2
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 5.1e-21 104.8 120 47.5
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 5.1e-21 104.8 120 47.5
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 8.7e-21 104.0 120 45.8
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 8.7e-21 104.0 120 45.8
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 1.1e-20 103.6 118 49.2
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 1.5e-20 103.2 118 47.5
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 1.9e-20 102.8 120 46.7
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 1.9e-20 102.8 119 49.6
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 2.5e-20 102.4 121 43.0
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 2.5e-20 102.4 120 45.8
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 2.5e-20 102.4 123 48.8
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 3.3e-20 102.1 120 46.7
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 4.3e-20 101.7 123 47.2
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 4.3e-20 101.7 120 47.5
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 7.4e-20 100.9 124 46.8
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.3e-19 100.1 120 46.7
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 1.6e-19 99.8 120 47.5
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 2.8e-19 99.0 69 78.3
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 2.8e-19 99.0 69 78.3
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 1.1e-18 97.1 125 46.4
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 3.1e-18 95.5 120 41.7
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 3.1e-18 95.5 120 40.8
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 1.4e-15 86.7 78 59.0
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 6.1e-14 81.3 112 41.1
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 6.1e-14 81.3 120 37.5
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 1.8e-13 79.7 118 40.7
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 3.0e-13 79.0 110 43.6
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 6.9e-10 67.8 59 54.2
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 5.0e-08 61.6 119 32.8


User provided reference genes

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