Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38837 Sapria himalayana HOM05D004993 ORTHO05D000001 1.5e-42 175.6 83 100.0
SHI42894 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-33 144.8 69 98.6
SHI14760 Sapria himalayana HOM05D004993 ORTHO05D000001 7.2e-32 140.2 82 85.4
SHI32039 Sapria himalayana HOM05D004993 ORTHO05D000001 1.6e-31 139.0 81 82.7
SHI11018 Sapria himalayana HOM05D004993 ORTHO05D000001 2.7e-31 138.3 82 81.7
SHI18682 Sapria himalayana HOM05D004993 ORTHO05D000001 3.6e-31 137.9 71 87.3
SHI27389 Sapria himalayana HOM05D004993 ORTHO05D000001 6.7e-30 133.7 80 78.8
SHI29111 Sapria himalayana HOM05D004993 ORTHO05D000001 2.6e-29 131.7 82 75.6
SHI04431 Sapria himalayana HOM05D004993 ORTHO05D000001 7.4e-29 130.2 74 85.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.3e-28 129.4 79 77.2
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-27 125.2 82 69.5
SHI18346 Sapria himalayana HOM05D004993 ORTHO05D000001 4.1e-27 124.4 69 81.2
SHI22042 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-27 124.4 67 85.1
Hma1.2p1_0315F.1_g122550 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 5.3e-27 124.0 80 70.0
SHI34508 Sapria himalayana HOM05D004993 ORTHO05D000001 1.2e-26 122.9 83 75.9
SHI49824 Sapria himalayana HOM05D004993 ORTHO05D000001 1.2e-26 122.9 83 75.9
SHI49903 Sapria himalayana HOM05D004993 ORTHO05D000001 1.2e-26 122.9 83 75.9
Hma1.2p1_0022F.1_g014640 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 1.3e-25 119.4 81 69.1
Hma1.2p1_0242F.1_g100810 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 3.6e-23 111.3 79 68.4
Atru.chr10.1206 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-22 109.0 73 68.5
Hma1.2p1_2459F.1_g322540 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 3.0e-22 108.2 62 79.0
Hma1.2p1_0270F.1_g108510 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 5.2e-22 107.5 79 59.5
SHI03321 Sapria himalayana HOM05D004993 ORTHO05D000001 6.3e-20 100.5 52 88.5
Hma1.2p1_0203F.1_g086190 Hydrangea macrophylla HOM05D011146 ORTHO05D012706 7.0e-19 97.1 64 71.9
Hma1.2p1_0939F.1_g239370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-16 89.4 72 56.9
TPR.G512 Trifolium pratense HOM05D011146 ORTHO05D012706 1.9e-16 89.0 65 63.1
Hma1.2p1_1611F.1_g293530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-15 86.3 70 55.7
Hma1.2p1_0473F.1_g160130 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-15 85.9 76 53.9
Hma1.2p1_0565F.1_g179600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-15 85.5 72 54.2
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.6e-15 84.7 73 56.2
Hma1.2p1_0252F.1_g102700 Hydrangea macrophylla HOM05D000002 ORTHO05D012706 6.1e-15 84.0 57 63.2
SHI33760 Sapria himalayana HOM05D002029 ORTHO05D002158 8.0e-15 83.6 74 59.5
Sopen01g008940 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-14 83.2 67 55.2
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.0e-14 81.6 76 51.3
Nn8g38577 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.0e-14 81.3 77 55.8
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.8e-14 80.1 72 52.8
CsaV3_6G001980 Cucumis sativus L. HOM05D004993 ORTHO05D000001 8.8e-14 80.1 75 45.3
Hma1.2p1_0459F.1_g157220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.5e-13 77.0 72 51.4
COL.COLO4_38403 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.8e-13 76.6 74 54.1
Hma1.2p1_1270F.1_g271670 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-12 76.3 70 50.0
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-12 75.5 71 52.1
COL.COLO4_33905 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.3e-12 73.9 67 52.2
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 6.3e-12 73.9 67 50.7
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 6.3e-12 73.9 67 50.7
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.1e-11 73.2 61 57.4
Sopen01g011050 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-11 72.8 67 49.3
TPR.G24932 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-11 72.4 73 47.9
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.1e-11 71.6 76 44.7
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-11 71.6 76 42.1
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 4.1e-11 71.2 76 43.4
Hma1.2p1_1626F.1_g294340 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 5.4e-11 70.9 58 55.2
RcHm_v2.0_Chr5g0038991 Rosa chinensis HOM05D000002 ORTHO05D000001 5.4e-11 70.9 76 43.4
SHI11257 Sapria himalayana HOM05D004993 ORTHO05D000001 5.4e-11 70.9 39 84.6
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.1e-11 70.1 76 44.7
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.1e-11 70.1 70 42.9
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.1e-11 70.1 72 47.2
CiPaw.14G131300 Carya illinoinensis HOM05D000750 ORTHO05D000714 1.2e-10 69.7 72 50.0
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.2e-10 69.7 67 47.8
TPR.G17518 Trifolium pratense HOM05D000002 ORTHO05D000001 1.2e-10 69.7 73 43.8
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.5e-10 68.2 67 46.3
HanXRQChr15g0491201 Helianthus annuus HOM05D000002 ORTHO05D000001 3.5e-10 68.2 76 43.4
ECA248G0191 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-10 67.8 76 42.1
HanXRQChr00c0303g0573321 Helianthus annuus HOM05D000002 ORTHO05D000001 4.5e-10 67.8 76 43.4
PGR102G3059 Punica granatum HOM05D000002 ORTHO05D000001 4.5e-10 67.8 76 44.7
Sopen07g023540 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-10 67.4 61 50.8
SHI50795 Sapria himalayana HOM05D004993 ORTHO05D000001 7.7e-10 67.0 39 82.1
SHI51781 Sapria himalayana HOM05D004993 ORTHO05D000001 7.7e-10 67.0 39 82.1
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 1.0e-09 66.6 76 43.4
Lj3g0007998 Lotus japonicus HOM05D000002 ORTHO05D000001 1.0e-09 66.6 73 43.8
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 1.3e-09 66.2 76 44.7
Oeu057465.1 Olea europaea HOM05D000002 ORTHO05D000001 1.7e-09 65.9 76 43.4
Eucgr.E01636 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.2e-09 65.5 76 42.1
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-09 65.5 81 42.0
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 2.2e-09 65.5 76 42.1
Oeu060318.1 Olea europaea HOM05D000002 ORTHO05D000001 2.2e-09 65.5 73 42.5
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 2.9e-09 65.1 83 38.6
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 2.9e-09 65.1 66 51.5
Oeu051830.1 Olea europaea HOM05D000002 ORTHO05D000001 2.9e-09 65.1 66 47.0
SHI11483 Sapria himalayana HOM05D014065 ORTHO05D000001 2.9e-09 65.1 69 43.5
SHI16346 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-09 65.1 69 43.5
Sopen08g008710 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-09 65.1 56 51.8
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-09 64.7 76 39.5
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 3.8e-09 64.7 76 42.1
HanXRQChr17g0570071 Helianthus annuus HOM05D000002 ORTHO05D000001 3.8e-09 64.7 76 39.5
Hma1.2p1_0133F.1_g061100 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 3.8e-09 64.7 39 74.4
Lj2C1206G8 Lonicera japonica HOM05D014274 ORTHO05D000001 5.0e-09 64.3 66 47.0
Oeu011917.1 Olea europaea HOM05D000002 ORTHO05D000001 5.0e-09 64.3 76 42.1
ECA246G1142 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.5e-09 63.9 76 39.5
Oeu022190.1 Olea europaea HOM05D000002 ORTHO05D000001 6.5e-09 63.9 76 42.1
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 6.5e-09 63.9 76 42.1
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 6.5e-09 63.9 76 42.1
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.5e-09 63.9 79 38.0
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 6.5e-09 63.9 66 47.0
Sopen12g009540 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-09 63.5 67 46.3
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 8.5e-09 63.5 76 43.4
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 1.1e-08 63.2 84 36.9
HanXRQChr02g0040961 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-08 63.2 71 40.8
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-08 63.2 81 39.5
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 1.5e-08 62.8 80 41.2
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 1.5e-08 62.8 73 42.5
Oeu006943.1 Olea europaea HOM05D000002 ORTHO05D000001 1.9e-08 62.4 73 42.5
Oeu008172.1 Olea europaea HOM05D000002 ORTHO05D000001 1.9e-08 62.4 76 42.1
TWI39G0276 Tripterygium wilfordii HOM05D010760 ORTHO05D000001 1.9e-08 62.4 78 35.9
HanXRQChr05g0138601 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-08 62.0 76 40.8
HanXRQChr07g0187191 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-08 62.0 76 40.8
HanXRQChr14g0429151 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-08 62.0 76 38.2
FvH4_6g11492 Fragaria vesca HOM05D000002 ORTHO05D000001 3.2e-08 61.6 66 50.0
HanXRQChr01g0008001 Helianthus annuus HOM05D000002 ORTHO05D000001 3.2e-08 61.6 84 44.0
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.2e-08 61.6 73 41.1
Oeu053596.1 Olea europaea HOM05D000002 ORTHO05D000001 3.2e-08 61.6 76 40.8
Peaxi162Scf00031g00297 Petunia axillaris HOM05D010760 ORTHO05D003210 3.2e-08 61.6 73 41.1
HanXRQChr14g0457051 Helianthus annuus HOM05D000002 ORTHO05D000001 4.2e-08 61.2 76 38.2
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-08 60.8 73 39.7
ECA240G0774 Erigeron canadensis HOM05D000004 ORTHO05D000001 5.5e-08 60.8 76 38.2
BcaC01g00635 Brassica carinata HOM05D030859 ORTHO05D000001 7.2e-08 60.5 66 43.9
HanXRQChr07g0202651 Helianthus annuus HOM05D000002 ORTHO05D000001 7.2e-08 60.5 81 39.5
SHI07546 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-08 60.5 69 42.0
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 9.4e-08 60.1 81 40.7
HanXRQChr11g0320841 Helianthus annuus HOM05D000002 ORTHO05D000001 9.4e-08 60.1 65 46.2
HanXRQChr16g0523581 Helianthus annuus HOM05D000002 ORTHO05D000001 9.4e-08 60.1 65 47.7
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-07 59.7 76 38.2
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 1.6e-07 59.3 62 43.5
COL.COLO4_24324 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.1e-07 58.9 52 51.9
GSVIVG01036374001 Vitis vinifera HOM05D000067 ORTHO05D000097 2.1e-07 58.9 47 53.2
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 2.7e-07 58.5 73 38.4
Hma1.2p1_0021F.1_g014420 Hydrangea macrophylla HOM05D014274 ORTHO05D000001 3.6e-07 58.2 66 45.5
PSO478G4367 Papaver somniferum HOM05D000002 ORTHO05D000001 3.6e-07 58.2 77 36.4
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 3.6e-07 58.2 76 36.8
Peaxi162Scf00019g00041 Petunia axillaris HOM05D002833 ORTHO05D000001 4.7e-07 57.8 73 39.7
QL04p024973 Quercus lobata HOM05D000002 ORTHO05D000001 4.7e-07 57.8 78 39.7
BcaC06g34903 Brassica carinata HOM05D030859 ORTHO05D000001 6.1e-07 57.4 63 46.0
BcaC09g48989 Brassica carinata HOM05D030859 ORTHO05D000001 6.1e-07 57.4 76 38.2
Peaxi162Scf00202g00046 Petunia axillaris HOM05D002833 ORTHO05D003210 6.1e-07 57.4 73 39.7
CSS0021257 Camellia sinensis var. sinensis HOM05D014065 ORTHO05D000001 8.0e-07 57.0 60 51.7
Eucgr.F03845 Eucalyptus grandis HOM05D000053 ORTHO05D000035 8.0e-07 57.0 69 37.7
FvH4_5g03532 Fragaria vesca HOM05D000002 ORTHO05D000001 8.0e-07 57.0 66 47.0
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 8.0e-07 57.0 73 39.7
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.0e-07 57.0 79 41.8
ECA240G3677 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.4e-06 56.2 76 34.2
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.4e-06 56.2 73 37.0
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.4e-06 56.2 73 38.4
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 1.8e-06 55.8 54 50.0
Hma1.2p1_0616F.1_g189980 Hydrangea macrophylla HOM05D014173 ORTHO05D000001 1.8e-06 55.8 35 71.4
Hma1.2p1_2397F.1_g321370 Hydrangea macrophylla HOM05D014173 ORTHO05D000001 1.8e-06 55.8 35 71.4
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-06 55.8 80 38.8
Peaxi162Scf00460g00045 Petunia axillaris HOM05D002833 ORTHO05D000001 1.8e-06 55.8 73 39.7
BcaB08g34655 Brassica carinata HOM05D030859 ORTHO05D000001 4.0e-06 54.7 69 39.1
ECA246G1745 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-06 54.7 76 35.5
PSO832G0334 Papaver somniferum HOM05D000002 ORTHO05D000001 4.0e-06 54.7 80 38.8
Hma1.2p1_0233F.1_g098110 Hydrangea macrophylla HOM05D014274 ORTHO05D024986 5.2e-06 54.3 66 43.9
Nitab4.5_0003766g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 5.2e-06 54.3 73 37.0
PSO339G0642 Papaver somniferum HOM05D000002 ORTHO05D000001 5.2e-06 54.3 76 35.5
SHI12187 Sapria himalayana HOM05D014065 ORTHO05D023016 5.2e-06 54.3 53 45.3
ECA247G3681 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-06 53.9 73 34.2
Hma1.2p1_0700F.1_g205820 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.8e-06 53.9 66 42.4
Oeu042688.1 Olea europaea HOM05D000002 ORTHO05D000001 6.8e-06 53.9 62 41.9
TAR541G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.8e-06 53.9 77 37.7


User provided reference genes

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