Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38642 Sapria himalayana HOM05D000210 ORTHO05D005611 9.2e-43 176.4 84 100.0
SHI37032 Sapria himalayana HOM05D000210 ORTHO05D005611 5.9e-42 173.7 84 98.8
SHI28944 Sapria himalayana HOM05D000210 ORTHO05D005611 7.0e-35 150.2 79 88.6
SHI38774 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-32 142.9 80 88.8
SHI40250 Sapria himalayana HOM05D000210 ORTHO05D005611 1.9e-32 142.1 83 80.7
SHI33437 Sapria himalayana HOM05D000210 ORTHO05D005611 1.4e-27 125.9 84 75.0
SHI52541 Sapria himalayana HOM05D000210 ORTHO05D005611 3.9e-25 117.9 83 72.3
SHI25125 Sapria himalayana HOM05D000210 ORTHO05D005611 5.0e-25 117.5 83 72.3
SHI48848 Sapria himalayana HOM05D000210 ORTHO05D005611 3.3e-24 114.8 61 85.2
SHI37216 Sapria himalayana HOM05D000210 ORTHO05D005611 8.9e-22 106.7 83 66.3
SHI47844 Sapria himalayana HOM05D000210 ORTHO05D005611 3.4e-21 104.8 83 66.3
MD11G1293000 Malus domestica HOM05D000210 ORTHO05D005611 3.5e-18 94.7 92 48.9
CANSAT25G2778 Cannabis sativa HOM05D000210 ORTHO05D005611 7.8e-18 93.6 92 47.8
Prupe.8G248400 Prunus persica HOM05D000210 ORTHO05D005611 3.9e-17 91.3 92 46.7
Gohir.A08G184800 Gossypium hirsutum HOM05D000210 ORTHO05D005611 6.6e-17 90.5 92 45.7
RcHm_v2.0_Chr6g0292061 Rosa chinensis HOM05D000210 ORTHO05D005611 6.6e-17 90.5 92 45.7
Cfa006073 Carpinus fangiana HOM05D000210 ORTHO05D005611 8.6e-17 90.1 92 45.7
FvH4_2g24250 Fragaria vesca HOM05D000210 ORTHO05D005611 1.1e-16 89.7 92 43.5
QL12p023065 Quercus lobata HOM05D000210 ORTHO05D005611 1.5e-16 89.4 92 45.7
SHI37091 Sapria himalayana HOM05D000210 ORTHO05D005611 1.5e-16 89.4 46 89.1
Gohir.D08G202984 Gossypium hirsutum HOM05D000210 ORTHO05D005611 1.9e-16 89.0 92 44.6
Gorai.004G214900 Gossypium raimondii HOM05D000210 ORTHO05D005611 1.9e-16 89.0 92 44.6
GSVIVG01011052001 Vitis vinifera HOM05D000210 ORTHO05D005611 2.5e-16 88.6 92 45.7
Haze_04777 Corylus avellana HOM05D000210 ORTHO05D005611 3.3e-16 88.2 92 44.6
FAN24G2823 Fragaria x ananassa HOM05D000210 ORTHO05D005611 3.3e-16 88.2 92 43.5
Atru.chr5.1322 Acer truncatum HOM05D000210 ORTHO05D005611 7.3e-16 87.0 92 44.6
SHI49437 Sapria himalayana HOM05D000210 ORTHO05D005611 7.3e-16 87.0 83 57.8
Eucgr.K03411 Eucalyptus grandis HOM05D000210 ORTHO05D005611 9.5e-16 86.7 92 43.5
SHI45120 Sapria himalayana HOM05D000210 ORTHO05D005611 9.5e-16 86.7 46 87.0
VMungo1383G3377 Vigna mungo HOM05D000210 ORTHO05D005611 9.5e-16 86.7 92 45.7
COL.COLO4_09151 Corchorus olitorius HOM05D000210 ORTHO05D005611 1.2e-15 86.3 92 44.6
CiPaw.07G096700 Carya illinoinensis HOM05D000210 ORTHO05D005611 1.6e-15 85.9 92 43.5
Glyma.03G149400 Glycine max HOM05D000210 ORTHO05D005611 1.6e-15 85.9 92 45.7
Dinv11271 Davidia involucrata HOM05D000210 ORTHO05D005611 2.1e-15 85.5 92 41.3
MSTRG.21588 Avicennia marina HOM05D000210 ORTHO05D005611 2.8e-15 85.1 92 46.7
Ciclev10019466m.g Citrus clementina HOM05D000210 ORTHO05D005611 4.7e-15 84.3 92 43.5
Duzib138G1044 Durio zibethinus HOM05D000210 ORTHO05D005611 4.7e-15 84.3 92 43.5
Phvul.001G147300 Phaseolus vulgaris HOM05D000210 ORTHO05D005611 4.7e-15 84.3 92 44.6
SHI48588 Sapria himalayana HOM05D000210 ORTHO05D005611 4.7e-15 84.3 83 56.6
FAN15G3364 Fragaria x ananassa HOM05D000210 ORTHO05D005611 8.1e-15 83.6 91 42.9
SHI48058 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-14 83.2 83 56.6
SHI47299 Sapria himalayana HOM05D000210 ORTHO05D005611 1.4e-14 82.8 83 56.6
Thecc.01G286500 Theobroma cacao HOM05D000210 ORTHO05D005611 1.4e-14 82.8 92 44.6
Eucgr.K03410 Eucalyptus grandis HOM05D000210 ORTHO05D005611 1.8e-14 82.4 92 42.4
Potri.014G136800 Populus trichocarpa HOM05D000210 ORTHO05D005611 1.8e-14 82.4 92 40.2
TAR633G2129 Trochodendron aralioides HOM05D000210 ORTHO05D005611 1.8e-14 82.4 92 43.5
Sabra14G0103200 Salix brachista HOM05D000210 ORTHO05D005611 3.1e-14 81.6 92 40.2
SHI42430 Sapria himalayana HOM05D000210 ORTHO05D005611 4.0e-14 81.3 46 82.6
CSS0008686 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 6.8e-14 80.5 92 42.4
Hund05363 Selenicereus undatus HOM05D000210 ORTHO05D005611 8.9e-14 80.1 92 39.1
vmacro14947 Vaccinium macrocarpon HOM05D000210 ORTHO05D005611 8.9e-14 80.1 92 42.4
AUR62034578 Chenopodium quinoa HOM05D000210 ORTHO05D005611 1.2e-13 79.7 92 39.1
Psat3g066840 Pisum sativum HOM05D000210 ORTHO05D005611 1.2e-13 79.7 92 39.1
Nn4g26117 Nelumbo nucifera HOM05D000210 ORTHO05D005611 1.5e-13 79.3 92 40.2
CDE09G1445 Ceratophyllum demersum HOM05D000210 ORTHO05D005611 2.0e-13 79.0 92 35.9
TPR.G32800 Trifolium pratense HOM05D000210 ORTHO05D005611 2.6e-13 78.6 93 41.9
Medtr7g094190 Medicago truncatula HOM05D000210 ORTHO05D005611 4.4e-13 77.8 92 38.0
Ah.08g212840 Amaranthus hybridus HOM05D000210 ORTHO05D005611 5.8e-13 77.4 92 40.2
arahy.Tifrunner.gnm1.ann1.2F1JWB Arachis hypogaea HOM05D002837 ORTHO05D005611 5.8e-13 77.4 94 43.6
CSS0038921 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 1.3e-12 76.3 92 40.2
Medtr7g094330 Medicago truncatula HOM05D000210 ORTHO05D005611 1.3e-12 76.3 92 38.0
Lj1g0017777 Lotus japonicus HOM05D000210 ORTHO05D005611 1.7e-12 75.9 92 40.2
Actinidia21087 Actinidia chinensis HOM05D000210 ORTHO05D005611 8.4e-12 73.6 92 35.9
CSS0026102 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 1.1e-11 73.2 91 39.6
arahy.Tifrunner.gnm1.ann1.M0CDH9 Arachis hypogaea HOM05D000210 ORTHO05D005611 2.4e-11 72.0 94 39.4
arahy.Tifrunner.gnm1.ann1.CG37GB Arachis hypogaea HOM05D000210 ORTHO05D005611 3.2e-11 71.6 95 38.9
SHI46659 Sapria himalayana HOM05D000210 ORTHO05D005611 4.1e-11 71.2 75 46.7
SHI48821 Sapria himalayana HOM05D000210 ORTHO05D005611 4.1e-11 71.2 85 52.9
Lj1C42G11 Lonicera japonica HOM05D000210 ORTHO05D005611 5.4e-11 70.9 92 34.8
arahy.Tifrunner.gnm1.ann1.11MVEE Arachis hypogaea HOM05D000210 ORTHO05D005611 7.1e-11 70.5 94 39.4
Manes.01G211600 Manihot esculenta HOM05D000210 ORTHO05D005611 7.1e-11 70.5 80 43.8
SHI30997 Sapria himalayana HOM05D000210 ORTHO05D005611 7.1e-11 70.5 45 71.1
SHI35107 Sapria himalayana HOM05D000210 ORTHO05D005611 1.2e-10 69.7 35 91.4
C03p06960 Brassica napus HOM05D000210 ORTHO05D000247 4.6e-10 67.8 84 39.3
BolC3t13196H Brassica oleracea HOM05D000210 ORTHO05D000247 4.6e-10 67.8 84 39.3
Sp6g30670 Schrenkiella parvula HOM05D000210 ORTHO05D000247 4.6e-10 67.8 84 41.7
SHI32945 Sapria himalayana HOM05D000210 ORTHO05D005611 7.8e-10 67.0 46 67.4
BcaNung01164 Brassica carinata HOM05D000210 ORTHO05D000247 2.3e-09 65.5 84 39.3
BcaNung01877 Brassica carinata HOM05D000210 ORTHO05D000247 3.0e-09 65.1 84 39.3
C02p06050 Brassica napus HOM05D000210 ORTHO05D000247 3.0e-09 65.1 84 39.3
BolC2t06547H Brassica oleracea HOM05D000210 ORTHO05D000247 3.0e-09 65.1 84 39.3
AT5G13320 Arabidopsis thaliana HOM05D000210 ORTHO05D000247 3.9e-09 64.7 84 39.3
BcaC04g19122 Brassica carinata HOM05D000210 ORTHO05D000247 3.9e-09 64.7 84 38.1
A10p24880 Brassica napus HOM05D000210 ORTHO05D000247 3.9e-09 64.7 84 38.1
C09p63740 Brassica napus HOM05D000210 ORTHO05D000247 3.9e-09 64.7 84 38.1
BolC9t59215H Brassica oleracea HOM05D000210 ORTHO05D000247 3.9e-09 64.7 84 38.1
A02p01840 Brassica napus HOM05D000210 ORTHO05D000247 8.7e-09 63.5 83 38.6
A03p05930 Brassica napus HOM05D000210 ORTHO05D000247 8.7e-09 63.5 84 38.1
BraA02t05158Z Brassica rapa HOM05D000210 ORTHO05D000247 8.7e-09 63.5 83 38.6
BraA03t09931Z Brassica rapa HOM05D000210 ORTHO05D000247 8.7e-09 63.5 84 38.1
SHI01933 Sapria himalayana HOM05D000210 ORTHO05D005611 8.7e-09 63.5 70 50.0
BraA10t44551Z Brassica rapa HOM05D000210 ORTHO05D000247 1.9e-08 62.4 84 36.9
AL6G23940 Arabidopsis lyrata HOM05D000210 ORTHO05D000247 7.3e-08 60.5 84 36.9
SHI06056 Sapria himalayana HOM05D000210 ORTHO05D005611 2.1e-07 58.9 33 75.8
Ca_08554_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 3.6e-07 58.2 83 38.6
Ca_08588_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 3.6e-07 58.2 83 38.6
BraA03t11775Z Brassica rapa HOM05D000210 ORTHO05D001446 6.2e-07 57.4 94 34.0
Thhalv10013094m.g Eutrema salsugineum HOM05D000210 ORTHO05D000247 6.2e-07 57.4 84 35.7
Gohir.A11G286282 Gossypium hirsutum HOM05D000210 ORTHO05D000247 8.1e-07 57.0 84 34.5
SHI42429 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-06 56.6 31 77.4
Gohir.A11G285800 Gossypium hirsutum HOM05D000210 ORTHO05D000247 1.4e-06 56.2 84 34.5
Nitab4.5_0002370g0050 Nicotiana tabacum HOM05D000210 ORTHO05D001446 1.4e-06 56.2 93 31.2
Aa31LG7G5100 Aethionema arabicum HOM05D000210 ORTHO05D000247 1.8e-06 55.8 84 34.5
BcaC01g05073 Brassica carinata HOM05D000210 ORTHO05D001446 1.8e-06 55.8 94 33.0
BolC3t15403H Brassica oleracea HOM05D000210 ORTHO05D001446 1.8e-06 55.8 94 33.0
Hma1.2p1_1494F.1_g286870 Hydrangea macrophylla HOM05D000210 ORTHO05D000247 1.8e-06 55.8 84 33.3
SHI38302 Sapria himalayana HOM05D000210 ORTHO05D005611 1.8e-06 55.8 50 56.0
BcaNung02180 Brassica carinata HOM05D000210 ORTHO05D000247 2.4e-06 55.5 92 33.7
C03p30550 Brassica napus HOM05D000210 ORTHO05D001446 2.4e-06 55.5 94 33.0
C07p59730 Brassica napus HOM05D000210 ORTHO05D000247 2.4e-06 55.5 92 33.7
C07p59740 Brassica napus HOM05D000210 ORTHO05D000247 2.4e-06 55.5 92 33.7
BolC7t46419H Brassica oleracea HOM05D000210 ORTHO05D000247 2.4e-06 55.5 92 33.7
BolC7t46420H Brassica oleracea HOM05D000210 ORTHO05D000247 2.4e-06 55.5 92 33.7
Gohir.D11G298700 Gossypium hirsutum HOM05D000210 ORTHO05D000247 2.4e-06 55.5 84 34.5
Gorai.007G323600 Gossypium raimondii HOM05D000210 ORTHO05D000247 2.4e-06 55.5 84 34.5
SHI46144 Sapria himalayana HOM05D000210 ORTHO05D005611 2.4e-06 55.5 29 82.8
AagrBONN_evm.TU.Sc2ySwM_344.1105 Anthoceros agrestis HOM05D000210 ORTHO05D000247 3.1e-06 55.1 91 35.2
BcaB01g03219 Brassica carinata HOM05D000210 ORTHO05D001446 3.1e-06 55.1 94 33.0
BcaB01g05363 Brassica carinata HOM05D000210 ORTHO05D000247 3.1e-06 55.1 85 35.3
AUR62037363 Chenopodium quinoa HOM05D000210 ORTHO05D001446 3.1e-06 55.1 82 32.9
SHI33220 Sapria himalayana HOM05D000024 ORTHO05D000007 3.1e-06 55.1 33 69.7
Thhalv10029358m.g Eutrema salsugineum HOM05D000210 ORTHO05D000247 4.0e-06 54.7 92 32.6
Solyc07g054580.3 Solanum lycopersicum HOM05D000210 ORTHO05D001446 4.0e-06 54.7 82 35.4
THA.LOC104825463 Tarenaya hassleriana HOM05D000210 ORTHO05D000247 4.0e-06 54.7 84 32.1
BcaC02g08221 Brassica carinata HOM05D000210 ORTHO05D000247 5.2e-06 54.3 92 30.4
Gohir.A11G285841 Gossypium hirsutum HOM05D000210 ORTHO05D000247 5.2e-06 54.3 84 32.1
AL1G55350 Arabidopsis lyrata HOM05D000210 ORTHO05D000247 6.9e-06 53.9 92 31.5
Carub.0006s1149 Capsella rubella HOM05D000210 ORTHO05D000247 6.9e-06 53.9 84 35.7
Dinv03838 Davidia involucrata HOM05D000210 ORTHO05D001446 6.9e-06 53.9 94 29.8
Gohir.A07G139400 Gossypium hirsutum HOM05D000210 ORTHO05D001446 6.9e-06 53.9 93 32.3
Gohir.D07G144500 Gossypium hirsutum HOM05D000210 ORTHO05D001446 6.9e-06 53.9 93 32.3
Gorai.001G156600 Gossypium raimondii HOM05D000210 ORTHO05D001446 6.9e-06 53.9 93 32.3
Sp1g05640 Schrenkiella parvula HOM05D000210 ORTHO05D000247 6.9e-06 53.9 92 30.4
PGSC0003DMG401018368 Solanum tuberosum HOM05D000210 ORTHO05D001446 6.9e-06 53.9 82 35.4
THA.LOC104815954 Tarenaya hassleriana HOM05D000210 ORTHO05D001446 6.9e-06 53.9 94 35.1
TWI36G0099 Tripterygium wilfordii HOM05D000210 ORTHO05D001446 6.9e-06 53.9 82 35.4
PGR042G3025 Punica granatum HOM05D000210 ORTHO05D001446 9.0e-06 53.5 93 33.3
Solyc06g048710.2 Solanum lycopersicum HOM05D000210 ORTHO05D001446 9.0e-06 53.5 64 39.1
Sopen06g014900 Solanum pennellii HOM05D000210 ORTHO05D001446 9.0e-06 53.5 64 39.1
Sopen07g028470 Solanum pennellii HOM05D000210 ORTHO05D001446 9.0e-06 53.5 82 34.1


User provided reference genes

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