Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-34 149.1 69 100.0
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-31 138.3 74 89.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-30 136.0 74 87.8
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.5e-30 135.6 74 87.8
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-30 135.6 74 87.8
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-30 133.3 71 88.7
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-30 133.3 74 86.5
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-30 133.3 71 88.7
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-29 132.1 74 85.1
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-29 131.7 74 85.1
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-29 131.0 74 85.1
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-29 130.6 70 90.0
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-29 130.6 74 83.8
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-29 130.6 74 85.1
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-29 130.2 74 83.8
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 1.1e-28 129.4 74 83.8
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.4e-28 129.0 74 82.4
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.8e-28 128.6 74 83.8
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.8e-28 128.6 74 83.8
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.8e-28 128.6 74 83.8
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.8e-28 128.6 74 83.8
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-28 127.9 74 82.4
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-28 127.9 72 84.7
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-28 127.9 74 82.4
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-28 127.9 71 84.5
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-28 127.9 74 82.4
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-28 127.9 74 83.8
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-28 127.9 71 84.5
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 5.2e-28 127.1 74 82.4
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-28 127.1 74 82.4
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-28 126.3 72 84.7
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 8.9e-28 126.3 74 82.4
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.5e-27 125.6 74 82.4
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 2.0e-27 125.2 74 81.1
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 2.0e-27 125.2 74 81.1
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 2.0e-27 125.2 74 81.1
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 2.0e-27 125.2 74 81.1
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-27 124.8 74 82.4
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-27 124.8 74 82.4
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 3.4e-27 124.4 74 81.1
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 3.4e-27 124.4 74 81.1
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 3.4e-27 124.4 74 81.1
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 3.4e-27 124.4 74 81.1
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-27 124.4 74 83.8
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 4.4e-27 124.0 74 81.1
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 4.4e-27 124.0 74 81.1
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-27 124.0 68 86.8
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-27 124.0 74 82.4
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.8e-27 123.6 74 81.1
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 5.8e-27 123.6 74 81.1
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-27 123.2 71 81.7
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 9.9e-27 122.9 72 81.9
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 9.9e-27 122.9 72 81.9
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 1.3e-26 122.5 71 81.7
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 1.3e-26 122.5 74 81.1
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 1.3e-26 122.5 74 81.1
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 1.3e-26 122.5 74 81.1
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 1.3e-26 122.5 74 81.1
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 1.3e-26 122.5 74 81.1
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.9e-26 121.3 72 80.6
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-26 121.3 71 81.7
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-26 120.9 74 81.1
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 4.9e-26 120.6 74 79.7
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 4.9e-26 120.6 74 79.7
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 4.9e-26 120.6 68 85.3
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 6.4e-26 120.2 74 77.0
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 6.4e-26 120.2 72 80.6
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.4e-26 119.8 72 80.6
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.4e-26 119.8 72 80.6
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-26 119.8 71 81.7
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.9e-25 118.6 68 82.4
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 3.2e-25 117.9 74 78.4
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 4.1e-25 117.5 69 81.2
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 4.1e-25 117.5 69 81.2
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 4.1e-25 117.5 69 81.2
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 4.1e-25 117.5 69 81.2
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.4e-25 117.1 71 78.9
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.4e-25 117.1 71 78.9
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.4e-25 117.1 71 78.9
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 5.4e-25 117.1 71 78.9
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 5.4e-25 117.1 70 80.0
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 9.2e-25 116.3 69 81.2
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-24 115.5 70 80.0
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-24 113.6 69 81.2
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 7.8e-24 113.2 74 77.0
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 7.8e-24 113.2 72 80.6
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.7e-23 112.1 72 75.0
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.3e-22 107.8 74 70.3
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 3.6e-21 104.4 74 71.6
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.4e-20 101.7 63 79.4
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.4e-19 97.8 67 70.1
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 4.4e-19 97.4 68 67.6
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 5.8e-19 97.1 69 65.2
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 2.4e-17 91.7 56 78.6
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 3.2e-17 91.3 59 76.3
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-16 89.0 52 82.7
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.7e-16 88.2 64 67.2
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-15 84.0 58 72.4
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-14 80.5 46 82.6
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 2.8e-13 78.2 57 68.4
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 8.1e-13 76.6 69 59.4
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-12 76.3 45 80.0
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 1.4e-12 75.9 48 77.1
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-12 74.7 47 76.6
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 4.5e-11 70.9 48 72.9
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-11 70.5 32 96.9
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-11 70.5 49 71.4
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-11 70.1 35 88.6
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 9.9e-11 69.7 49 67.3
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-10 69.3 32 93.8
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-09 66.2 35 82.9
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.4e-09 65.9 36 80.6
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 1.2e-08 62.8 40 72.5
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.1e-08 62.0 31 87.1
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.3e-07 58.5 50 58.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-07 58.5 28 92.9
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 5.1e-07 57.4 62 45.2
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.5e-06 55.1 34 70.6
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-06 53.9 35 74.3
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-06 53.9 35 74.3


User provided reference genes

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