Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 4.1e-212 741.1 369 100.0
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 1.1e-121 440.7 371 65.5
SHI49389 Sapria himalayana HOM05D004909 ORTHO05D009625 6.3e-104 381.7 223 87.0
SHI49457 Sapria himalayana HOM05D004909 ORTHO05D009625 2.0e-94 350.1 205 86.8
SHI35986 Sapria himalayana HOM05D004909 ORTHO05D009625 5.7e-89 332.0 201 85.1
SHI40430 Sapria himalayana HOM05D004909 ORTHO05D009625 3.0e-82 309.7 213 78.9
SHI41761 Sapria himalayana HOM05D004909 ORTHO05D009625 3.4e-81 306.2 251 66.1
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 4.3e-60 236.1 434 38.7
SHI43987 Sapria himalayana HOM05D004909 ORTHO05D009625 1.3e-56 224.6 136 83.8
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 1.6e-54 217.6 290 46.9
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 1.4e-50 204.5 443 34.3
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 2.4e-50 203.8 443 34.3
Aqoxy2G02242 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 5.4e-47 192.6 426 33.3
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 5.4e-47 192.6 278 45.0
SHI29964 Sapria himalayana HOM05D004909 ORTHO05D009625 2.5e-44 183.7 321 41.7
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 5.6e-44 182.6 340 36.5
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 6.2e-43 179.1 290 39.0
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 1.9e-39 167.5 447 30.9
Sc11g0004480 Simmondsia chinensis HOM05D004909 ORTHO05D009625 7.1e-39 165.6 290 38.6
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 1.0e-37 161.8 296 36.5
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 8.1e-35 152.1 369 32.5
SHI35576 Sapria himalayana HOM05D004909 ORTHO05D009625 1.8e-34 151.0 98 80.6
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 3.1e-34 150.2 356 34.6
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 5.3e-34 149.4 425 29.4
CAN.G1001.42 Capsicum annuum HOM05D004909 ORTHO05D009625 1.2e-33 148.3 230 42.2
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 8.7e-29 132.1 348 31.3
EL10Ac1g02203 Beta vulgaris HOM05D004909 ORTHO05D009625 6.2e-27 125.9 262 38.2
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 7.6e-25 119.0 313 32.3
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 1.0e-24 118.6 369 29.8
SHI39947 Sapria himalayana HOM05D004909 ORTHO05D009625 6.5e-24 115.9 119 58.0
SHI49388 Sapria himalayana HOM05D009967 ORTHO05D009625 2.5e-23 114.0 56 92.9
AUR62010529 Chenopodium quinoa HOM05D004909 ORTHO05D005619 4.6e-22 109.8 394 28.7
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 1.0e-21 108.6 216 34.7
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.9e-20 104.4 178 36.0
Hma1.2p1_0295F.1_g116730 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 5.7e-20 102.8 213 35.7
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 5.7e-20 102.8 177 37.9
SHI51920 Sapria himalayana HOM05D009967 ORTHO05D009625 6.5e-16 89.4 46 89.1
CAN.G335.18 Capsicum annuum HOM05D004909 ORTHO05D009625 1.8e-13 81.3 135 40.0
Sc14g0003260 Simmondsia chinensis HOM05D004909 ORTHO05D009625 3.3e-12 77.0 124 35.5
EL10As7g23793 Beta vulgaris HOM05D004909 ORTHO05D009928 9.7e-12 75.5 146 34.9
RcHm_v2.0_MTg0498751 Rosa chinensis HOM05D004909 ORTHO05D009625 4.8e-11 73.2 262 27.5
SHI29965 Sapria himalayana HOM05D022355 ORTHO05D009625 3.1e-10 70.5 37 86.5
SGA_v2.0_scaffold119G32792 Striga asiatica HOM05D004909 ORTHO05D009625 4.5e-09 66.6 102 44.1
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.6e-06 58.2 141 31.2
SHI49265 Sapria himalayana HOM05D009967 ORTHO05D009625 1.6e-06 58.2 38 73.7
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 2.1e-06 57.8 111 39.6
CAN.G490.20 Capsicum annuum HOM05D004909 ORTHO05D009625 2.7e-06 57.4 109 35.8
Hma1.2p1_1313F.1_g274950 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 6.1e-06 56.2 70 38.6


User provided reference genes

Program Settings