Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38044 Sapria himalayana HOM05D000107 ORTHO05D000062 4.3e-42 174.1 79 100.0
SHI06290 Sapria himalayana HOM05D000648 ORTHO05D000062 1.1e-29 132.9 71 83.1
SHI33764 Sapria himalayana HOM05D000107 ORTHO05D000062 3.5e-28 127.9 71 80.3
SHI17352 Sapria himalayana HOM05D000107 ORTHO05D000062 8.7e-27 123.2 62 87.1
Manes.04G058760 Manihot esculenta HOM05D000107 ORTHO05D000062 5.2e-24 114.0 71 71.8
Manes.15G191830 Manihot esculenta HOM05D000107 ORTHO05D000062 5.2e-24 114.0 71 71.8
Manes.16G074801 Manihot esculenta HOM05D000107 ORTHO05D000062 1.5e-23 112.5 71 70.4
SHI42708 Sapria himalayana HOM05D013063 ORTHO05D000062 7.6e-23 110.2 68 76.5
SHI31600 Sapria himalayana HOM05D000107 ORTHO05D000062 4.2e-21 104.4 61 73.8
SHI36256 Sapria himalayana HOM05D000107 ORTHO05D000062 5.4e-21 104.0 70 68.6
SHI13501 Sapria himalayana HOM05D000107 ORTHO05D000062 1.2e-20 102.8 69 63.8
SHI35609 Sapria himalayana HOM05D000107 ORTHO05D000062 1.6e-20 102.4 62 72.6
SHI51771 Sapria himalayana HOM05D000107 ORTHO05D000062 1.6e-20 102.4 69 63.8
Manes.10G068101 Manihot esculenta HOM05D000107 ORTHO05D000062 3.5e-20 101.3 71 59.2
SHI32944 Sapria himalayana HOM05D000107 ORTHO05D000062 4.6e-20 100.9 73 64.4
Manes.17G119950 Manihot esculenta HOM05D000107 ORTHO05D000062 1.3e-19 99.4 71 57.7
SHI41918 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-19 99.4 69 60.9
SHI41193 Sapria himalayana HOM05D000107 ORTHO05D000062 6.6e-19 97.1 65 70.8
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.3e-18 94.4 71 54.9
CAN.G338.14 Capsicum annuum HOM05D015443 ORTHO05D000062 1.3e-17 92.8 70 55.7
SHI38043 Sapria himalayana HOM05D000107 ORTHO05D000062 3.6e-17 91.3 71 52.1
SHI22906 Sapria himalayana HOM05D000107 ORTHO05D000062 8.1e-17 90.1 71 47.9
Sopen11g015700 Solanum pennellii HOM05D000004 ORTHO05D000002 8.1e-17 90.1 72 58.3
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 8.1e-17 90.1 71 47.9
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-16 89.7 71 52.1
SHI36114 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-16 89.4 71 57.7
SHI37531 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-16 89.4 71 57.7
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-16 89.4 71 54.9
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-16 89.0 71 56.3
SHI19809 Sapria himalayana HOM05D000107 ORTHO05D000062 3.1e-16 88.2 71 62.0
Manes.13G071916 Manihot esculenta HOM05D000107 ORTHO05D009534 4.0e-16 87.8 66 59.1
SHI07609 Sapria himalayana HOM05D000107 ORTHO05D000062 4.0e-16 87.8 71 53.5
SHI45688 Sapria himalayana HOM05D000107 ORTHO05D000062 6.9e-16 87.0 71 53.5
SHI04875 Sapria himalayana HOM05D000107 ORTHO05D000062 1.2e-15 86.3 72 52.8
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.0e-15 85.5 71 49.3
TWI81G0027 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.0e-15 85.5 72 47.2
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.6e-15 85.1 71 49.3
TPR.G39680 Trifolium pratense HOM05D000107 ORTHO05D000062 3.4e-15 84.7 71 45.1
TWI56G1165 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.4e-15 84.7 71 45.1
TPR.G11453 Trifolium pratense HOM05D000107 ORTHO05D000062 4.5e-15 84.3 72 43.1
SHI50389 Sapria himalayana HOM05D000648 ORTHO05D009534 5.8e-15 84.0 70 61.4
SHI22501 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-14 82.8 71 59.2
SHI31249 Sapria himalayana HOM05D007985 ORTHO05D000062 1.3e-14 82.8 75 50.7
TWI60G0864 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.3e-14 82.8 71 47.9
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.3e-14 82.8 71 47.9
Manes.09G152601 Manihot esculenta HOM05D000107 ORTHO05D000062 2.9e-14 81.6 66 57.6
SHI10866 Sapria himalayana HOM05D000107 ORTHO05D000062 3.8e-14 81.3 46 78.3
ECA247G3969 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.4e-14 80.5 62 54.8
Manes.06G021367 Manihot esculenta HOM05D000107 ORTHO05D000062 6.4e-14 80.5 66 56.1
Manes.11G017526 Manihot esculenta HOM05D000107 ORTHO05D000062 6.4e-14 80.5 66 56.1
SHI37597 Sapria himalayana HOM05D000107 ORTHO05D000062 6.4e-14 80.5 75 50.7
SHI40666 Sapria himalayana HOM05D000648 ORTHO05D009534 6.4e-14 80.5 47 76.6
TPR.G12582 Trifolium pratense HOM05D000107 ORTHO05D000062 6.4e-14 80.5 71 43.7
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.4e-14 80.1 62 54.8
ECA234G1982 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.4e-14 80.1 75 50.7
TPR.G38773 Trifolium pratense HOM05D000107 ORTHO05D000062 8.4e-14 80.1 71 45.1
Ca_13708_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 1.9e-13 79.0 69 49.3
TWI59G1045 Tripterygium wilfordii HOM05D008266 ORTHO05D000062 3.2e-13 78.2 68 47.1
ECA247G2380 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.2e-13 77.8 75 49.3
SHI50626 Sapria himalayana HOM05D000648 ORTHO05D000062 4.2e-13 77.8 46 73.9
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.2e-13 77.8 71 45.1
SHI22913 Sapria himalayana HOM05D007985 ORTHO05D000062 5.4e-13 77.4 64 57.8
Solyc10g049777.1 Solanum lycopersicum HOM05D010076 ORTHO05D012500 5.4e-13 77.4 57 54.4
TPR.G36007 Trifolium pratense HOM05D000107 ORTHO05D000062 5.4e-13 77.4 70 40.0
Ca_18697_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 9.3e-13 76.6 69 47.8
ECA233G5623 Erigeron canadensis HOM05D000107 ORTHO05D000568 1.2e-12 76.3 70 52.9
PGSC0003DMG400014039 Solanum tuberosum HOM05D010076 ORTHO05D012500 1.6e-12 75.9 71 45.1
Ca_12327_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.1e-12 75.5 63 50.8
SHI46220 Sapria himalayana HOM05D000648 ORTHO05D009534 2.1e-12 75.5 60 61.7
Ca_26934_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 3.5e-12 74.7 57 54.4
SHI34320 Sapria himalayana HOM05D000107 ORTHO05D000062 3.5e-12 74.7 70 45.7
ECA236G4269 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.6e-12 74.3 70 50.0
Ah.02g121890 Amaranthus hybridus HOM05D000107 ORTHO05D000062 7.9e-12 73.6 70 42.9
SHI41404 Sapria himalayana HOM05D000107 ORTHO05D000062 7.9e-12 73.6 47 70.2
TPR.G25746 Trifolium pratense HOM05D000107 ORTHO05D000062 1.0e-11 73.2 70 44.3
COL.COLO4_23532 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.3e-11 72.8 68 47.1
COL.COLO4_24208 Corchorus olitorius HOM05D016401 ORTHO05D009534 1.3e-11 72.8 68 47.1
SHI48886 Sapria himalayana HOM05D007985 ORTHO05D000062 1.8e-11 72.4 61 54.1
BcaC03g18089 Brassica carinata HOM05D008266 ORTHO05D000062 2.3e-11 72.0 72 44.4
BcaC06g34574 Brassica carinata HOM05D008266 ORTHO05D000062 3.0e-11 71.6 72 44.4
Ca_27568_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 6.7e-11 70.5 70 44.3
SHI44951 Sapria himalayana HOM05D000107 ORTHO05D000062 6.7e-11 70.5 69 47.8
Ah.14g081230 Amaranthus hybridus HOM05D000107 ORTHO05D000062 8.7e-11 70.1 77 39.0
Ah.14g081250 Amaranthus hybridus HOM05D000107 ORTHO05D000062 8.7e-11 70.1 77 39.0
COL.COLO4_28468 Corchorus olitorius HOM05D000107 ORTHO05D000062 8.7e-11 70.1 72 45.8
ECA234G1021 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-10 69.7 69 46.4
CAN.G80.40 Capsicum annuum HOM05D000107 ORTHO05D000062 1.5e-10 69.3 70 40.0
ECA238G4150 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-10 69.3 69 43.5
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 2.5e-10 68.6 72 43.1
COL.COLO4_36911 Corchorus olitorius HOM05D000107 ORTHO05D000062 3.3e-10 68.2 72 44.4
SHI36566 Sapria himalayana HOM05D000648 ORTHO05D000062 3.3e-10 68.2 60 56.7
BcaB02g11130 Brassica carinata HOM05D008266 ORTHO05D000062 4.3e-10 67.8 72 38.9
ECA248G3962 Erigeron canadensis HOM05D000006 ORTHO05D000062 4.3e-10 67.8 52 55.8
SHI51153 Sapria himalayana HOM05D007985 ORTHO05D000062 4.3e-10 67.8 58 53.4
BcaB01g00797 Brassica carinata HOM05D008266 ORTHO05D000062 5.6e-10 67.4 71 40.8
Ca_02478_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 5.6e-10 67.4 70 41.4
COL.COLO4_37631 Corchorus olitorius HOM05D000107 ORTHO05D000062 5.6e-10 67.4 72 44.4
SHI43950 Sapria himalayana HOM05D000107 ORTHO05D000062 5.6e-10 67.4 47 57.4
COL.COLO4_19578 Corchorus olitorius HOM05D000107 ORTHO05D000062 7.4e-10 67.0 66 43.9
BcaB07g32592 Brassica carinata HOM05D008266 ORTHO05D000062 9.6e-10 66.6 71 40.8
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 9.6e-10 66.6 72 41.7
SHI40597 Sapria himalayana HOM05D007985 ORTHO05D000062 1.3e-09 66.2 66 50.0
SHI48739 Sapria himalayana HOM05D000648 ORTHO05D009534 1.3e-09 66.2 34 82.4
SHI49157 Sapria himalayana HOM05D007985 ORTHO05D000062 1.3e-09 66.2 66 50.0
SHI44265 Sapria himalayana HOM05D007985 ORTHO05D000062 1.6e-09 65.9 66 50.0
BcaB01g02847 Brassica carinata HOM05D008266 ORTHO05D000062 2.8e-09 65.1 65 44.6
PGSC0003DMG400032278 Solanum tuberosum HOM05D000107 ORTHO05D017132 2.8e-09 65.1 70 41.4
BcaB03g16140 Brassica carinata HOM05D008266 ORTHO05D000062 4.8e-09 64.3 71 45.1
COL.COLO4_05846 Corchorus olitorius HOM05D014433 ORTHO05D000110 4.8e-09 64.3 67 43.3
BcaC03g17092 Brassica carinata HOM05D008266 ORTHO05D000062 6.2e-09 63.9 71 39.4
COL.COLO4_28982 Corchorus olitorius HOM05D009620 ORTHO05D013057 6.2e-09 63.9 73 41.1
ECA246G0176 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.2e-09 63.9 69 47.8
SHI03535 Sapria himalayana HOM05D007985 ORTHO05D000062 6.2e-09 63.9 64 48.4
SHI04874 Sapria himalayana HOM05D000107 ORTHO05D000062 6.2e-09 63.9 69 43.5
TPR.G20799 Trifolium pratense HOM05D000107 ORTHO05D000062 6.2e-09 63.9 71 38.0
SHI32940 Sapria himalayana HOM05D000648 ORTHO05D009534 8.1e-09 63.5 31 80.6
HanXRQChr05g0154061 Helianthus annuus HOM05D000107 ORTHO05D000568 1.1e-08 63.2 64 43.8
HanXRQChr05g0154091 Helianthus annuus HOM05D000107 ORTHO05D000568 1.1e-08 63.2 64 43.8
COL.COLO4_36518 Corchorus olitorius HOM05D008266 ORTHO05D000062 1.4e-08 62.8 66 37.9
THA.LOC104815415 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.4e-08 62.8 74 36.5
THA.LOC104816687 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.4e-08 62.8 74 36.5
COL.COLO4_24438 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.8e-08 62.4 72 41.7
Hund19898 Selenicereus undatus HOM05D000107 ORTHO05D000062 1.8e-08 62.4 63 39.7
Ca_19138_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.4e-08 62.0 58 41.4
COL.COLO4_29949 Corchorus olitorius HOM05D000107 ORTHO05D000062 2.4e-08 62.0 70 42.9
SHI38421 Sapria himalayana HOM05D000107 ORTHO05D000062 3.1e-08 61.6 38 65.8
THA.LOC104810224 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 6.9e-08 60.5 56 41.1
THA.LOC104810147 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 9.0e-08 60.1 73 34.2
BcaNung02471 Brassica carinata HOM05D008266 ORTHO05D000062 1.2e-07 59.7 74 33.8
COL.COLO4_06019 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.2e-07 59.7 56 48.2
BcaC01g02221 Brassica carinata HOM05D008266 ORTHO05D009904 2.6e-07 58.5 73 35.6
BcaC08g44727 Brassica carinata HOM05D008266 ORTHO05D000062 2.6e-07 58.5 73 34.2
COL.COLO4_33324 Corchorus olitorius HOM05D000107 ORTHO05D000062 2.6e-07 58.5 73 39.7
Lsat_1_v5_gn_1_25621 Lactuca sativa HOM05D008975 ORTHO05D010134 2.6e-07 58.5 44 45.5
Atru.chr6.372 Acer truncatum HOM05D000107 ORTHO05D000062 3.4e-07 58.2 64 40.6
BcaB02g10137 Brassica carinata HOM05D008266 ORTHO05D000062 3.4e-07 58.2 57 40.4
BcaB07g30750 Brassica carinata HOM05D008266 ORTHO05D000062 3.4e-07 58.2 73 34.2
BcaC04g18851 Brassica carinata HOM05D008266 ORTHO05D000062 4.5e-07 57.8 73 32.9
SHI37598 Sapria himalayana HOM05D000107 ORTHO05D000062 4.5e-07 57.8 36 72.2
Aa31sc75G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 5.8e-07 57.4 70 32.9
BcaC08g47042 Brassica carinata HOM05D008266 ORTHO05D000062 5.8e-07 57.4 74 32.4
PSO675G6961 Papaver somniferum HOM05D000107 ORTHO05D000062 7.6e-07 57.0 64 43.8
Atru.chr2.704 Acer truncatum HOM05D000107 ORTHO05D000062 9.9e-07 56.6 69 39.1
COL.COLO4_37049 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.3e-06 56.2 61 39.3
SHI47808 Sapria himalayana HOM05D036853 ORTHO05D000062 1.3e-06 56.2 35 57.1
THA.LOC104810640 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.3e-06 56.2 72 33.3
COL.COLO4_07238 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.7e-06 55.8 72 37.5
BcaC05g26938 Brassica carinata HOM05D008266 ORTHO05D009904 2.2e-06 55.5 57 40.4
BcaC07g41630 Brassica carinata HOM05D008266 ORTHO05D000062 2.2e-06 55.5 60 41.7
HanXRQChr09g0265351 Helianthus annuus HOM05D000107 ORTHO05D000062 2.9e-06 55.1 72 37.5
SHI46046 Sapria himalayana HOM05D000107 ORTHO05D000062 2.9e-06 55.1 36 66.7
BcaB04g17841 Brassica carinata HOM05D008266 ORTHO05D000062 3.8e-06 54.7 74 35.1
BcaB06g26682 Brassica carinata HOM05D008266 ORTHO05D000062 3.8e-06 54.7 74 32.4
PSO339G6582 Papaver somniferum HOM05D000107 ORTHO05D000062 3.8e-06 54.7 64 42.2
PSO384G2882 Papaver somniferum HOM05D000107 ORTHO05D000062 3.8e-06 54.7 64 42.2
Thecc.10G113400 Theobroma cacao HOM05D000066 ORTHO05D016279 3.8e-06 54.7 47 48.9
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 4.9e-06 54.3 71 35.2
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 4.9e-06 54.3 66 43.9
COL.COLO4_22692 Corchorus olitorius HOM05D025240 ORTHO05D019037 4.9e-06 54.3 65 35.4
PGSC0003DMG400004420 Solanum tuberosum HOM05D000107 ORTHO05D000062 4.9e-06 54.3 69 39.1
Carub.0006s2725 Capsella rubella HOM05D001086 ORTHO05D009904 6.4e-06 53.9 60 36.7
TWI73G1301 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 6.4e-06 53.9 45 48.9
AUR62022286 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.4e-06 53.5 65 40.0
Hund00711 Selenicereus undatus HOM05D001220 ORTHO05D000110 8.4e-06 53.5 62 38.7


User provided reference genes

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