Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38014 Sapria himalayana HOM05D000222 ORTHO05D000329 2.2e-63 245.4 113 100.0
SHI27275 Sapria himalayana HOM05D000222 ORTHO05D000329 6.6e-20 100.9 49 91.8
SHI36277 Sapria himalayana HOM05D000222 ORTHO05D000329 6.6e-20 100.9 89 58.4
SHI46297 Sapria himalayana HOM05D000222 ORTHO05D000329 3.3e-19 98.6 48 89.6
SHI46738 Sapria himalayana HOM05D000222 ORTHO05D000329 3.3e-19 98.6 48 89.6
Aqoxy1G02465 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 3.6e-18 95.1 105 55.2
Aqoxy6G02232 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 3.6e-18 95.1 105 55.2
HanXRQChr13g0387091 Helianthus annuus HOM05D000222 ORTHO05D000329 3.6e-18 95.1 105 55.2
SHI08058 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-17 93.6 109 51.4
SHI39034 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-17 93.6 120 43.3
TAR536G0015 Trochodendron aralioides HOM05D000222 ORTHO05D000329 1.4e-17 93.2 105 53.3
Atru.chr13.271 Acer truncatum HOM05D000222 ORTHO05D000329 2.3e-17 92.4 105 53.3
Migut.C00851 Erythranthe guttata HOM05D000222 ORTHO05D000329 2.3e-17 92.4 105 53.3
Lj4C798T7 Lonicera japonica HOM05D000222 ORTHO05D000329 2.3e-17 92.4 105 53.3
Oeu046282.1 Olea europaea HOM05D000222 ORTHO05D000329 2.3e-17 92.4 113 51.3
ECA233G5047 Erigeron canadensis HOM05D000222 ORTHO05D000329 3.1e-17 92.0 105 53.3
Lj4C22T9 Lonicera japonica HOM05D000222 ORTHO05D000329 3.1e-17 92.0 105 53.3
Lalb_Chr03g0033421 Lupinus albus HOM05D000222 ORTHO05D000329 3.1e-17 92.0 105 54.3
Os06g0716700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 3.1e-17 92.0 109 51.4
Nn6g32037 Nelumbo nucifera HOM05D000222 ORTHO05D000329 4.0e-17 91.7 109 51.4
SalBow8G4062 Salvia bowleyana HOM05D000222 ORTHO05D000329 4.0e-17 91.7 109 50.5
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 5.2e-17 91.3 105 52.4
Hma1.2p1_0733F.1_g210310 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 5.2e-17 91.3 104 53.8
Lsat_1_v5_gn_8_30781 Lactuca sativa HOM05D000222 ORTHO05D000329 5.2e-17 91.3 105 53.3
Medtr1g025430 Medicago truncatula HOM05D000222 ORTHO05D000329 5.2e-17 91.3 105 52.4
SHI45073 Sapria himalayana HOM05D000222 ORTHO05D000329 5.2e-17 91.3 126 42.9
TAR381G1457 Trochodendron aralioides HOM05D000222 ORTHO05D000329 5.2e-17 91.3 105 52.4
TAR628G0053 Trochodendron aralioides HOM05D000222 ORTHO05D000329 5.2e-17 91.3 105 52.4
DCAR_023014 Daucus carota HOM05D000222 ORTHO05D000329 6.8e-17 90.9 109 50.5
Nn5g30723 Nelumbo nucifera HOM05D000222 ORTHO05D000329 6.8e-17 90.9 109 49.5
Nitab4.5_0000337g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 6.8e-17 90.9 105 53.3
Peaxi162Scf00553g00114 Petunia axillaris HOM05D000222 ORTHO05D000329 6.8e-17 90.9 105 53.3
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 6.8e-17 90.9 105 53.3
Sabra05G0186600 Salix brachista HOM05D000222 ORTHO05D000329 6.8e-17 90.9 105 53.3
SHI38200 Sapria himalayana HOM05D000222 ORTHO05D000329 6.8e-17 90.9 44 93.2
ATR0810G217 Amborella trichopoda HOM05D000222 ORTHO05D000329 8.9e-17 90.5 109 51.4
Dinv39529 Davidia involucrata HOM05D000222 ORTHO05D000329 8.9e-17 90.5 105 52.4
SHI38079 Sapria himalayana HOM05D010388 ORTHO05D011388 8.9e-17 90.5 49 83.7
SHI38137 Sapria himalayana HOM05D010388 ORTHO05D011388 8.9e-17 90.5 49 83.7
Zm00001eb228120 Zea mays HOM05D000222 ORTHO05D000329 8.9e-17 90.5 105 52.4
Zm00001eb272290 Zea mays HOM05D000222 ORTHO05D000329 8.9e-17 90.5 105 52.4
ClCG08G014210 Citrullus lanatus HOM05D000222 ORTHO05D000329 1.2e-16 90.1 109 49.5
Cc10_g01540 Coffea canephora HOM05D000222 ORTHO05D000329 1.2e-16 90.1 105 52.4
COL.COLO4_26130 Corchorus olitorius HOM05D000222 ORTHO05D000329 1.2e-16 90.1 105 53.3
MELO3C011021.2 Cucumis melo HOM05D000222 ORTHO05D000329 1.2e-16 90.1 109 49.5
CsaV3_2G029630 Cucumis sativus L. HOM05D000222 ORTHO05D000329 1.2e-16 90.1 109 49.5
DCAR_013875 Daucus carota HOM05D000222 ORTHO05D000329 1.2e-16 90.1 105 52.4
Migut.N03167 Erythranthe guttata HOM05D000222 ORTHO05D000329 1.2e-16 90.1 109 50.5
QL02p011881 Quercus lobata HOM05D000222 ORTHO05D000329 1.2e-16 90.1 105 52.4
Sed0003929 Sechium edule HOM05D000222 ORTHO05D000329 1.2e-16 90.1 109 49.5
HPP92_012933 Vanilla planifolia HOM05D000222 ORTHO05D000329 1.2e-16 90.1 109 50.5
CSS0018705 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 1.5e-16 89.7 105 51.4
Lalb_Chr19g0131441 Lupinus albus HOM05D000222 ORTHO05D000329 1.5e-16 89.7 105 52.4
MBI05_g33510_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 1.5e-16 89.7 105 52.4
Sc15g0004910 Simmondsia chinensis HOM05D000222 ORTHO05D000329 1.5e-16 89.7 105 53.3
SGA_v2.0_scaffold11G05934 Striga asiatica HOM05D000222 ORTHO05D000329 1.5e-16 89.7 109 49.5
MSTRG.1183 Avicennia marina HOM05D000222 ORTHO05D000329 2.0e-16 89.4 105 52.4
EL10Ac1g02175 Beta vulgaris HOM05D000222 ORTHO05D000329 2.0e-16 89.4 109 50.5
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 2.0e-16 89.4 105 52.4
MBI05_g33509_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 2.0e-16 89.4 105 52.4
Nitab4.5_0003251g0080 Nicotiana tabacum HOM05D000222 ORTHO05D000329 2.0e-16 89.4 105 52.4
TPR.G26394 Trifolium pratense HOM05D000222 ORTHO05D000329 2.0e-16 89.4 105 51.4
VMungo0647G1547 Vigna mungo HOM05D000222 ORTHO05D000329 2.0e-16 89.4 105 52.4
Actinidia15430 Actinidia chinensis HOM05D000222 ORTHO05D000329 2.6e-16 89.0 105 51.4
AagrBONN_evm.TU.Sc2ySwM_344.3459 Anthoceros agrestis HOM05D000222 ORTHO05D000329 2.6e-16 89.0 109 49.5
MSTRG.25258 Avicennia marina HOM05D000222 ORTHO05D000329 2.6e-16 89.0 105 52.4
Pp3c14_3360 Physcomitrium patens HOM05D000222 ORTHO05D000329 2.6e-16 89.0 109 49.5
PGSC0003DMG400009940 Solanum tuberosum HOM05D000222 ORTHO05D000329 2.6e-16 89.0 109 51.4
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 2.6e-16 89.0 105 52.4
TWI56G0657 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 2.6e-16 89.0 105 52.4
GSVIVG01009931001 Vitis vinifera HOM05D000222 ORTHO05D000329 2.6e-16 89.0 105 51.4
Psat6g002360 Pisum sativum HOM05D000222 ORTHO05D000329 3.4e-16 88.6 105 51.4
SHI39280 Sapria himalayana HOM05D010388 ORTHO05D011388 3.4e-16 88.6 44 88.6
CDE05G2968 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 4.4e-16 88.2 105 50.5
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 4.4e-16 88.2 105 50.5
Duzib116G0368 Durio zibethinus HOM05D000222 ORTHO05D000329 4.4e-16 88.2 105 51.4
Peaxi162Scf00553g00086 Petunia axillaris HOM05D000222 ORTHO05D000329 4.4e-16 88.2 105 51.4
Solyc04g081570.3 Solanum lycopersicum HOM05D000222 ORTHO05D000329 4.4e-16 88.2 105 51.4
Sopen04g035180 Solanum pennellii HOM05D000222 ORTHO05D000329 4.4e-16 88.2 105 51.4
arahy.Tifrunner.gnm1.ann1.P8FSM4 Arachis hypogaea HOM05D000222 ORTHO05D000329 5.8e-16 87.8 109 48.6
arahy.Tifrunner.gnm1.ann1.T76A9L Arachis hypogaea HOM05D000222 ORTHO05D000329 5.8e-16 87.8 109 48.6
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 50.5
AUR62040542 Chenopodium quinoa HOM05D000222 ORTHO05D000329 5.8e-16 87.8 109 50.5
AUR62041482 Chenopodium quinoa HOM05D000222 ORTHO05D000329 5.8e-16 87.8 109 50.5
Eucgr.H00972 Eucalyptus grandis HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 50.5
HanXRQChr12g0366871 Helianthus annuus HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 50.5
Manes.18G012200 Manihot esculenta HOM05D000222 ORTHO05D000329 5.8e-16 87.8 109 48.6
Nitab4.5_0000337g0070 Nicotiana tabacum HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 51.4
PSO541G0316 Papaver somniferum HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 51.4
PSO675G6717 Papaver somniferum HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 51.4
Phvul.001G005200 Phaseolus vulgaris HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 50.5
Sc02g0008650 Simmondsia chinensis HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 51.4
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 51.4
vmacro04362 Vaccinium macrocarpon HOM05D000222 ORTHO05D000329 5.8e-16 87.8 105 50.5
Duzib093G0379 Durio zibethinus HOM05D000222 ORTHO05D000329 7.5e-16 87.4 105 51.4
Manes.18G012500 Manihot esculenta HOM05D000222 ORTHO05D000329 7.5e-16 87.4 109 48.6
Hund05159 Selenicereus undatus HOM05D000222 ORTHO05D000329 7.5e-16 87.4 105 52.4
CAN.G311.42 Capsicum annuum HOM05D000222 ORTHO05D000329 9.8e-16 87.0 105 50.5
Lalb_Chr11g0061831 Lupinus albus HOM05D000222 ORTHO05D000329 9.8e-16 87.0 105 50.5
CANSAT78G1241 Cannabis sativa HOM05D000222 ORTHO05D000329 1.3e-15 86.7 105 50.5
Gohir.D01G097100 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.3e-15 86.7 105 51.4
Gorai.002G122800 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.3e-15 86.7 105 51.4
FvH4_2g38300 Fragaria vesca HOM05D000222 ORTHO05D000329 1.7e-15 86.3 109 48.6
FAN15G0622 Fragaria x ananassa HOM05D000222 ORTHO05D000329 1.7e-15 86.3 109 48.6
FAN27G0624 Fragaria x ananassa HOM05D000222 ORTHO05D000329 1.7e-15 86.3 109 48.6
Gohir.A06G002800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-15 86.3 105 50.5
Gohir.A06G002900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-15 86.3 105 50.5
Gohir.D06G005800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-15 86.3 105 50.5
Gohir.D06G005900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-15 86.3 105 50.5
Gorai.010G003000 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.7e-15 86.3 105 50.5
Lj5g0005976 Lotus japonicus HOM05D000222 ORTHO05D000329 1.7e-15 86.3 104 51.0
RcHm_v2.0_Chr6g0303071 Rosa chinensis HOM05D000222 ORTHO05D000329 1.7e-15 86.3 109 48.6
SEGI_06170 Sequoiadendron giganteum HOM05D000222 ORTHO05D000329 1.7e-15 86.3 109 49.5
Thecc.08G046300 Theobroma cacao HOM05D000222 ORTHO05D000329 1.7e-15 86.3 105 51.4
C07p53420 Brassica napus HOM05D000222 ORTHO05D000329 2.2e-15 85.9 106 50.9
CBR_g34543 Chara braunii HOM05D000222 ORTHO05D000329 2.2e-15 85.9 109 50.5
FAN20G2674 Fragaria x ananassa HOM05D000222 ORTHO05D000329 2.2e-15 85.9 109 48.6
Glyma.17G258700 Glycine max HOM05D000222 ORTHO05D000329 2.2e-15 85.9 105 50.5
PGR083G1489 Punica granatum HOM05D000222 ORTHO05D000329 2.2e-15 85.9 104 51.0
SMO116G0137 Selaginella moellendorffii HOM05D000222 ORTHO05D000329 2.2e-15 85.9 109 49.5
AT4G24190 Arabidopsis thaliana HOM05D000222 ORTHO05D000329 2.9e-15 85.5 124 43.5
C01p19440 Brassica napus HOM05D000222 ORTHO05D000329 2.9e-15 85.5 104 50.0
CDE05G1631 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 2.9e-15 85.5 105 48.6
Glyma.14G219700 Glycine max HOM05D000222 ORTHO05D000329 2.9e-15 85.5 105 50.5
Gohir.A01G110500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 2.9e-15 85.5 105 50.5
MD08G1011200 Malus domestica HOM05D000222 ORTHO05D000329 2.9e-15 85.5 109 48.6
Prupe.1G363900 Prunus persica HOM05D000222 ORTHO05D000329 2.9e-15 85.5 109 48.6
Sed0002325 Sechium edule HOM05D000222 ORTHO05D000329 2.9e-15 85.5 109 47.7
Aa31sc288G10 Aethionema arabicum HOM05D000222 ORTHO05D000329 3.7e-15 85.1 104 50.0
Lalb_Chr08g0246171 Lupinus albus HOM05D000222 ORTHO05D000329 3.7e-15 85.1 105 49.5
AL7G29090 Arabidopsis lyrata HOM05D000222 ORTHO05D000329 4.9e-15 84.7 104 50.0
BcaNung01125 Brassica carinata HOM05D000222 ORTHO05D000329 4.9e-15 84.7 104 50.0
A01p15520 Brassica napus HOM05D000222 ORTHO05D000329 4.9e-15 84.7 104 50.0
A08p21570 Brassica napus HOM05D000222 ORTHO05D000329 4.9e-15 84.7 104 50.0
BraA01t01491Z Brassica rapa HOM05D000222 ORTHO05D000329 4.9e-15 84.7 104 50.0
BraA08t34104Z Brassica rapa HOM05D000222 ORTHO05D000329 4.9e-15 84.7 104 50.0
Carub.0007s1690 Capsella rubella HOM05D000222 ORTHO05D000329 4.9e-15 84.7 104 50.0
Thhalv10024414m.g Eutrema salsugineum HOM05D000222 ORTHO05D000329 4.9e-15 84.7 104 50.0
BolC1t01873H Brassica oleracea HOM05D000222 ORTHO05D000329 6.4e-15 84.3 116 44.8
CARHR231600 Cardamine hirsuta HOM05D000222 ORTHO05D000329 6.4e-15 84.3 109 46.8
Ca_13433_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 6.4e-15 84.3 102 51.0
BcaC09g50898 Brassica carinata HOM05D000222 ORTHO05D000329 8.3e-15 84.0 104 49.0
A03p55100 Brassica napus HOM05D000222 ORTHO05D000329 8.3e-15 84.0 104 49.0
BraA03t14570Z Brassica rapa HOM05D000222 ORTHO05D000329 8.3e-15 84.0 104 49.0
SHI44100 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-14 83.6 50 74.0
Sp7g22160 Schrenkiella parvula HOM05D000222 ORTHO05D000329 1.1e-14 83.6 104 49.0
SHI03598 Sapria himalayana HOM05D010388 ORTHO05D369370 1.4e-14 83.2 45 86.7
BolC7t45836H Brassica oleracea HOM05D000222 ORTHO05D000329 2.4e-14 82.4 109 46.8
Mapoly0031s0145 Marchantia polymorpha HOM05D000222 ORTHO05D000329 2.4e-14 82.4 109 45.9
Cre02.g080650 Chlamydomonas reinhardtii HOM05D000222 ORTHO05D000329 5.4e-14 81.3 114 43.9
SHI51495 Sapria himalayana HOM05D000222 ORTHO05D000329 5.4e-14 81.3 39 97.4
BolC8t48563H Brassica oleracea HOM05D000222 ORTHO05D000329 2.0e-13 79.3 126 41.3
SHI37158 Sapria himalayana HOM05D000222 ORTHO05D000329 6.0e-13 77.8 111 45.0
SHI36263 Sapria himalayana HOM05D000222 ORTHO05D000329 1.0e-12 77.0 45 73.3
SHI14784 Sapria himalayana HOM05D000222 ORTHO05D011388 1.7e-12 76.3 54 74.1
BcaC07g38137 Brassica carinata HOM05D000222 ORTHO05D000329 2.3e-12 75.9 130 39.2
MCO04G117 Micromonas commoda HOM05D000222 ORTHO05D000329 5.0e-12 74.7 106 47.2
SHI41337 Sapria himalayana HOM05D000222 ORTHO05D000329 8.6e-12 73.9 41 85.4
SHI51760 Sapria himalayana HOM05D000222 ORTHO05D000329 1.5e-11 73.2 39 89.7
Pp3c8_6510 Physcomitrium patens HOM05D000222 ORTHO05D000329 2.5e-11 72.4 109 41.3
SHI42404 Sapria himalayana HOM05D000222 ORTHO05D000329 2.5e-11 72.4 50 66.0
SHI46803 Sapria himalayana HOM05D000222 ORTHO05D000329 4.3e-11 71.6 39 87.2
PRCOL_00003444 Prasinoderma coloniale HOM05D000222 ORTHO05D000329 7.3e-11 70.9 104 40.4
SHI23715 Sapria himalayana HOM05D010388 ORTHO05D011388 9.5e-11 70.5 35 88.6
SHI42688 Sapria himalayana HOM05D000222 ORTHO05D025877 1.2e-10 70.1 32 90.6
SHI38270 Sapria himalayana HOM05D010388 ORTHO05D011388 1.6e-10 69.7 42 66.7
SHI38696 Sapria himalayana HOM05D000222 ORTHO05D000329 1.6e-10 69.7 99 43.4
SHI51988 Sapria himalayana HOM05D000222 ORTHO05D000329 1.6e-10 69.7 39 87.2
SHI39705 Sapria himalayana HOM05D000222 ORTHO05D000329 2.8e-10 68.9 37 89.2
Dinv31859 Davidia involucrata HOM05D000222 ORTHO05D000329 6.2e-10 67.8 52 63.5
SHI49335 Sapria himalayana HOM05D010085 ORTHO05D011712 6.2e-10 67.8 42 73.8
SHI39056 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-09 67.0 43 69.8
Aqoxy152s001 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 1.4e-09 66.6 95 43.2
Potri.002G020249 Populus trichocarpa HOM05D000222 ORTHO05D014703 1.5e-08 63.2 43 74.4
SHI38625 Sapria himalayana HOM05D000222 ORTHO05D000329 9.9e-08 60.5 105 40.0
SHI37792 Sapria himalayana HOM05D000222 ORTHO05D000329 1.3e-07 60.1 49 63.3
SHI36780 Sapria himalayana HOM05D000222 ORTHO05D000329 4.9e-07 58.2 103 39.8
SHI40500 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-06 57.0 106 36.8
SHI36157 Sapria himalayana HOM05D000222 ORTHO05D000329 1.4e-06 56.6 95 37.9
SHI40777 Sapria himalayana HOM05D000222 ORTHO05D000329 1.4e-06 56.6 104 36.5
SHI43105 Sapria himalayana HOM05D000222 ORTHO05D000329 1.4e-06 56.6 104 34.6
Rhsim06G0020200 Rhododendron simsii HOM05D000222 ORTHO05D000329 1.9e-06 56.2 43 65.1
TPR.G24592 Trifolium pratense HOM05D000222 ORTHO05D000329 2.4e-06 55.8 73 46.6
SHI37060 Sapria himalayana HOM05D000222 ORTHO05D011388 3.2e-06 55.5 27 88.9
SHI37702 Sapria himalayana HOM05D000222 ORTHO05D011388 3.2e-06 55.5 27 88.9
SHI35686 Sapria himalayana HOM05D000222 ORTHO05D000329 4.1e-06 55.1 31 80.6
SHI39706 Sapria himalayana HOM05D000222 ORTHO05D011388 4.1e-06 55.1 26 96.2
SHI50494 Sapria himalayana HOM05D000222 ORTHO05D000329 4.1e-06 55.1 52 57.7


User provided reference genes

Program Settings