Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37949 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-58 229.6 117 100.0
SHI45198 Sapria himalayana HOM05D003883 ORTHO05D004605 2.9e-31 138.7 73 91.8
SHI48034 Sapria himalayana HOM05D003883 ORTHO05D004605 6.4e-26 120.9 103 65.0
SHI12193 Sapria himalayana HOM05D000105 ORTHO05D004605 8.3e-26 120.6 76 81.6
SHI11547 Sapria himalayana HOM05D003883 ORTHO05D000093 8.6e-23 110.5 75 77.3
SHI16150 Sapria himalayana HOM05D003883 ORTHO05D004605 5.6e-22 107.8 170 41.2
SHI16558 Sapria himalayana HOM05D003883 ORTHO05D004605 6.2e-21 104.4 117 53.0
SHI40358 Sapria himalayana HOM05D003883 ORTHO05D004605 8.0e-21 104.0 127 50.4
SHI22499 Sapria himalayana HOM05D003883 ORTHO05D004605 2.6e-19 99.0 53 90.6
SHI47005 Sapria himalayana HOM05D003883 ORTHO05D004605 3.4e-19 98.6 122 49.2
SHI20166 Sapria himalayana HOM05D003883 ORTHO05D004605 2.4e-17 92.4 129 47.3
SHI15545 Sapria himalayana HOM05D000616 ORTHO05D000062 2.3e-12 75.9 38 94.7
SHI09697 Sapria himalayana HOM05D003883 ORTHO05D004605 1.2e-11 73.6 48 75.0
SHI15762 Sapria himalayana HOM05D003883 ORTHO05D004605 2.0e-11 72.8 48 75.0
SHI00855 Sapria himalayana HOM05D000105 ORTHO05D000023 2.6e-11 72.4 37 91.9
SHI04659 Sapria himalayana HOM05D003883 ORTHO05D010069 2.6e-11 72.4 90 50.0
SHI16809 Sapria himalayana HOM05D003883 ORTHO05D004605 3.4e-11 72.0 36 94.4
SHI19852 Sapria himalayana HOM05D003883 ORTHO05D004605 3.4e-11 72.0 38 89.5
SHI22734 Sapria himalayana HOM05D003883 ORTHO05D004605 3.4e-11 72.0 36 94.4
SHI31989 Sapria himalayana HOM05D003883 ORTHO05D004605 3.4e-11 72.0 36 94.4
SHI15886 Sapria himalayana HOM05D003883 ORTHO05D004605 4.4e-11 71.6 48 75.0
SHI01655 Sapria himalayana HOM05D002349 ORTHO05D002464 7.5e-11 70.9 44 79.5
SHI01632 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-10 70.1 48 70.8
SHI24738 Sapria himalayana HOM05D003883 ORTHO05D004605 2.2e-10 69.3 36 94.4
SHI34947 Sapria himalayana HOM05D003883 ORTHO05D004605 2.2e-10 69.3 35 94.3
SHI45438 Sapria himalayana HOM05D003883 ORTHO05D004605 2.2e-10 69.3 36 88.9
SHI47059 Sapria himalayana HOM05D003883 ORTHO05D004605 4.9e-10 68.2 38 84.2
SHI36014 Sapria himalayana HOM05D003883 ORTHO05D004605 6.4e-10 67.8 36 88.9
SHI49925 Sapria himalayana HOM05D003883 ORTHO05D004605 1.1e-09 67.0 35 88.6
SHI50134 Sapria himalayana HOM05D003883 ORTHO05D004605 1.1e-09 67.0 35 88.6
SHI27587 Sapria himalayana HOM05D003883 ORTHO05D004605 2.4e-09 65.9 36 86.1
SHI54185 Sapria himalayana HOM05D003883 ORTHO05D004605 3.2e-09 65.5 36 86.1
SHI53701 Sapria himalayana HOM05D003883 ORTHO05D004605 9.2e-09 63.9 36 86.1
SHI13924 Sapria himalayana HOM05D003883 ORTHO05D010069 1.2e-08 63.5 41 75.6
SHI33600 Sapria himalayana HOM05D003883 ORTHO05D010069 1.6e-08 63.2 42 69.0
SHI32562 Sapria himalayana HOM05D008076 ORTHO05D001544 2.1e-08 62.8 63 54.0
ClCG08G001170 Citrullus lanatus HOM05D003883 ORTHO05D004605 2.7e-08 62.4 45 68.9
SHI03434 Sapria himalayana HOM05D003883 ORTHO05D004605 2.7e-08 62.4 36 83.3
SHI15221 Sapria himalayana HOM05D003883 ORTHO05D004605 2.7e-08 62.4 36 86.1
SHI00945 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-08 62.0 45 60.0
SHI28093 Sapria himalayana HOM05D002538 ORTHO05D000001 7.8e-08 60.8 33 87.9
SHI47009 Sapria himalayana HOM05D003883 ORTHO05D004605 7.8e-08 60.8 43 76.7
ClCG08G000830 Citrullus lanatus HOM05D003883 ORTHO05D004605 1.0e-07 60.5 36 80.6
MELO3C033524.2 Cucumis melo HOM05D003883 ORTHO05D004605 1.0e-07 60.5 36 80.6
SHI10002 Sapria himalayana HOM05D000014 ORTHO05D000093 1.0e-07 60.5 39 71.8
SHI35464 Sapria himalayana HOM05D000648 ORTHO05D000568 1.0e-07 60.5 37 78.4
SHI51464 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-07 60.1 31 93.5
SHI53632 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-07 60.1 31 90.3
Atru.chr13.2533 Acer truncatum HOM05D003883 ORTHO05D004605 1.7e-07 59.7 48 62.5
BcaB01g01452 Brassica carinata HOM05D003883 ORTHO05D004605 1.7e-07 59.7 36 77.8
BcaC04g21018 Brassica carinata HOM05D003883 ORTHO05D004605 1.7e-07 59.7 36 77.8
C09p36620 Brassica napus HOM05D003883 ORTHO05D004605 1.7e-07 59.7 36 77.8
BolC9t56494H Brassica oleracea HOM05D003883 ORTHO05D004605 1.7e-07 59.7 36 77.8
CsaV3_5G039780 Cucumis sativus L. HOM05D003883 ORTHO05D004605 2.3e-07 59.3 36 77.8
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 2.3e-07 59.3 36 77.8
Lj5g0005523 Lotus japonicus HOM05D003883 ORTHO05D004605 2.3e-07 59.3 48 64.6
MD10G1003200 Malus domestica HOM05D003883 ORTHO05D004605 2.3e-07 59.3 36 77.8
Aa31LG9G11890 Aethionema arabicum HOM05D003883 ORTHO05D004605 3.0e-07 58.9 45 66.7
CsaV3_5G039770 Cucumis sativus L. HOM05D003883 ORTHO05D004605 3.0e-07 58.9 43 65.1
FvH4_2g00580 Fragaria vesca HOM05D003883 ORTHO05D004605 3.0e-07 58.9 34 79.4
FAN06G0896 Fragaria x ananassa HOM05D003883 ORTHO05D004605 3.0e-07 58.9 34 79.4
Potri.019G069000 Populus trichocarpa HOM05D003883 ORTHO05D004605 3.0e-07 58.9 42 71.4
Sabra19G0082500 Salix brachista HOM05D003883 ORTHO05D004605 3.0e-07 58.9 42 71.4
Sed0003271 Sechium edule HOM05D003883 ORTHO05D004605 3.0e-07 58.9 45 64.4
A09p28820 Brassica napus HOM05D003883 ORTHO05D004605 3.9e-07 58.5 36 75.0
BraA09t38444Z Brassica rapa HOM05D003883 ORTHO05D004605 3.9e-07 58.5 36 75.0
Duzib147G1304 Durio zibethinus HOM05D003883 ORTHO05D004605 3.9e-07 58.5 42 69.0
Glyma.10G214800 Glycine max HOM05D003883 ORTHO05D004605 3.9e-07 58.5 42 69.0
Glyma.20G177100 Glycine max HOM05D003883 ORTHO05D004605 3.9e-07 58.5 42 69.0
Medtr1g096170 Medicago truncatula HOM05D003883 ORTHO05D004605 3.9e-07 58.5 36 77.8
Phvul.007G091200 Phaseolus vulgaris HOM05D003883 ORTHO05D004605 3.9e-07 58.5 42 69.0
SHI31328 Sapria himalayana HOM05D011447 ORTHO05D010069 3.9e-07 58.5 35 77.1
Sp6g07310 Schrenkiella parvula HOM05D003883 ORTHO05D004605 3.9e-07 58.5 36 75.0
TPR.G1761 Trifolium pratense HOM05D003883 ORTHO05D004605 3.9e-07 58.5 36 75.0
TWI12G1089 Tripterygium wilfordii HOM05D003883 ORTHO05D004605 3.9e-07 58.5 42 66.7
arahy.Tifrunner.gnm1.ann1.6B58CR Arachis hypogaea HOM05D003883 ORTHO05D004605 5.1e-07 58.2 36 75.0
arahy.Tifrunner.gnm1.ann1.DBA4ID Arachis hypogaea HOM05D003883 ORTHO05D004605 5.1e-07 58.2 36 75.0
MSTRG.1604 Avicennia marina HOM05D003883 ORTHO05D004605 5.1e-07 58.2 36 75.0
HanXRQChr12g0369281 Helianthus annuus HOM05D003883 ORTHO05D004605 5.1e-07 58.2 36 75.0
SGA_v2.0_scaffold118G32634 Striga asiatica HOM05D003883 ORTHO05D004605 5.1e-07 58.2 36 75.0
AL6G43920 Arabidopsis lyrata HOM05D003883 ORTHO05D004605 6.6e-07 57.8 36 72.2
AT4G10110 Arabidopsis thaliana HOM05D003883 ORTHO05D004605 6.6e-07 57.8 36 72.2
CARHR261150 Cardamine hirsuta HOM05D003883 ORTHO05D004605 6.6e-07 57.8 36 72.2
FAN20G1119 Fragaria x ananassa HOM05D003883 ORTHO05D004605 6.6e-07 57.8 34 76.5
FAN27G2158 Fragaria x ananassa HOM05D003883 ORTHO05D004605 6.6e-07 57.8 34 76.5
Gohir.A05G374200 Gossypium hirsutum HOM05D003883 ORTHO05D004605 8.6e-07 57.4 42 69.0
Gohir.D04G041300 Gossypium hirsutum HOM05D003883 ORTHO05D004605 8.6e-07 57.4 42 69.0
Gorai.012G046700 Gossypium raimondii HOM05D003883 ORTHO05D004605 8.6e-07 57.4 42 69.0
Nitab4.5_0001202g0010 Nicotiana tabacum HOM05D003883 ORTHO05D004605 8.6e-07 57.4 42 69.0
Thecc.04G023200 Theobroma cacao HOM05D003883 ORTHO05D004605 8.6e-07 57.4 42 69.0
Cpa.g.sc21.99 Carica papaya HOM05D003883 ORTHO05D004605 1.1e-06 57.0 48 60.4
CiPaw.03G013400 Carya illinoinensis HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 75.0
Cc10_g16020 Coffea canephora HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 75.0
MELO3C022158.2 Cucumis melo HOM05D003883 ORTHO05D004605 1.1e-06 57.0 32 81.2
Thhalv10029015m.g Eutrema salsugineum HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 72.2
HanXRQChr05g0150991 Helianthus annuus HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 72.2
Lsat_1_v5_gn_6_111041 Lactuca sativa HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 72.2
Lalb_Chr02g0141881 Lupinus albus HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 72.2
PSO210G0567 Papaver somniferum HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 72.2
Psat6g186320 Pisum sativum HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 72.2
QL09p001675 Quercus lobata HOM05D003883 ORTHO05D004605 1.1e-06 57.0 36 75.0
SHI26226 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-06 57.0 56 57.1
MSTRG.25500 Avicennia marina HOM05D003883 ORTHO05D004605 1.5e-06 56.6 37 70.3
CANSAT01G1230 Cannabis sativa HOM05D003883 ORTHO05D004605 1.5e-06 56.6 36 75.0
Ca_10599_v3 Cicer arietinum L. HOM05D003883 ORTHO05D004605 1.5e-06 56.6 42 64.3
Cc10_g13970 Coffea canephora HOM05D003883 ORTHO05D004605 1.5e-06 56.6 36 75.0
Lsat_1_v5_gn_8_63781 Lactuca sativa HOM05D003883 ORTHO05D004605 1.5e-06 56.6 36 75.0
Nitab4.5_0005094g0010 Nicotiana tabacum HOM05D003883 ORTHO05D004605 1.5e-06 56.6 36 72.2
PSO761G0643 Papaver somniferum HOM05D003883 ORTHO05D004605 1.5e-06 56.6 36 69.4
Sed0024898 Sechium edule HOM05D003883 ORTHO05D004605 1.5e-06 56.6 34 76.5
THA.LOC104815789 Tarenaya hassleriana HOM05D003883 ORTHO05D004605 1.5e-06 56.6 36 69.4
RcHm_v2.0_Chr6g0251031 Rosa chinensis HOM05D003883 ORTHO05D004605 1.9e-06 56.2 36 72.2
TWI75G0838 Tripterygium wilfordii HOM05D003883 ORTHO05D004605 1.9e-06 56.2 36 72.2
GSVIVG01037209001 Vitis vinifera HOM05D003883 ORTHO05D004605 1.9e-06 56.2 42 66.7
Actinidia29370 Actinidia chinensis HOM05D003883 ORTHO05D004605 2.5e-06 55.8 34 73.5
ECA246G4775 Erigeron canadensis HOM05D003883 ORTHO05D004605 2.5e-06 55.8 36 69.4
Hma1.2p1_1248F.1_g270250 Hydrangea macrophylla HOM05D003883 ORTHO05D004605 2.5e-06 55.8 36 72.2
Peaxi162Scf00078g00928 Petunia axillaris HOM05D003883 ORTHO05D004605 2.5e-06 55.8 36 72.2
SalBow7G2433 Salvia bowleyana HOM05D003883 ORTHO05D004605 2.5e-06 55.8 36 72.2
Sc10g0006520 Simmondsia chinensis HOM05D003883 ORTHO05D004605 2.5e-06 55.8 36 72.2
VMungo0720G2352 Vigna mungo HOM05D003883 ORTHO05D004605 2.5e-06 55.8 42 64.3
Oeu028627.2 Olea europaea HOM05D003883 ORTHO05D004605 3.3e-06 55.5 36 72.2
AUR62013386 Chenopodium quinoa HOM05D003883 ORTHO05D004605 4.3e-06 55.1 36 72.2
Lj7P418T16 Lonicera japonica HOM05D003883 ORTHO05D004605 4.3e-06 55.1 40 65.0
Rhsim02G0081700 Rhododendron simsii HOM05D003883 ORTHO05D004605 4.3e-06 55.1 36 69.4
SHI20072 Sapria himalayana HOM05D000616 ORTHO05D000233 4.3e-06 55.1 32 81.2
Solyc11g039950.3 Solanum lycopersicum HOM05D003883 ORTHO05D004605 4.3e-06 55.1 36 72.2
Sopen11g016790 Solanum pennellii HOM05D003883 ORTHO05D004605 4.3e-06 55.1 36 72.2
PGSC0003DMG400026862 Solanum tuberosum HOM05D003883 ORTHO05D004605 4.3e-06 55.1 36 72.2
Cfa008054 Carpinus fangiana HOM05D003883 ORTHO05D004605 5.6e-06 54.7 42 64.3
Haze_13971 Corylus avellana HOM05D003883 ORTHO05D004605 5.6e-06 54.7 42 64.3
DCAR_001170 Daucus carota HOM05D003883 ORTHO05D004605 5.6e-06 54.7 36 69.4
DCAR_010106 Daucus carota HOM05D003883 ORTHO05D004605 5.6e-06 54.7 36 69.4
Eucgr.F02940 Eucalyptus grandis HOM05D003883 ORTHO05D004605 5.6e-06 54.7 36 69.4
Manes.18G112700 Manihot esculenta HOM05D003883 ORTHO05D004605 5.6e-06 54.7 36 69.4
Hund26941 Selenicereus undatus HOM05D003883 ORTHO05D004605 5.6e-06 54.7 36 69.4
EL10Ac1g01277 Beta vulgaris HOM05D003883 ORTHO05D004605 7.3e-06 54.3 36 66.7
Ciclev10022415m.g Citrus clementina HOM05D003883 ORTHO05D004605 7.3e-06 54.3 36 69.4
Aqoxy5G01863 Aquilegia oxysepala HOM05D003883 ORTHO05D004605 9.5e-06 53.9 36 63.9
CSS0035251 Camellia sinensis var. sinensis HOM05D003883 ORTHO05D004605 9.5e-06 53.9 36 66.7
Dinv22125 Davidia involucrata HOM05D003883 ORTHO05D004605 9.5e-06 53.9 36 69.4


User provided reference genes

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