Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37689 Sapria himalayana HOM05D001607 ORTHO05D001893 1.5e-82 309.3 138 100.0
SHI40073 Sapria himalayana HOM05D001607 ORTHO05D001893 5.2e-35 151.4 69 94.2
SHI42886 Sapria himalayana HOM05D001607 ORTHO05D001893 1.1e-32 143.7 110 64.5
SHI45003 Sapria himalayana HOM05D001607 ORTHO05D001893 1.1e-32 143.7 110 64.5
SHI51475 Sapria himalayana HOM05D001607 ORTHO05D001893 1.1e-32 143.7 110 64.5
SHI49348 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-31 140.2 110 63.6
SHI37182 Sapria himalayana HOM05D001607 ORTHO05D002419 5.9e-31 137.9 70 85.7
SHI50208 Sapria himalayana HOM05D001607 ORTHO05D002419 2.8e-28 129.0 71 84.5
SHI51286 Sapria himalayana HOM05D001607 ORTHO05D001893 2.8e-28 129.0 60 93.3
SHI51959 Sapria himalayana HOM05D001607 ORTHO05D001893 1.8e-24 116.3 69 78.3
SHI51644 Sapria himalayana HOM05D001607 ORTHO05D001893 7.0e-24 114.4 110 54.5
SHI51466 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-23 113.6 69 73.9
SHI51566 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-23 113.6 108 54.6
SHI36164 Sapria himalayana HOM05D001607 ORTHO05D001893 2.0e-23 112.8 110 53.6
SHI42412 Sapria himalayana HOM05D001607 ORTHO05D001893 3.5e-23 112.1 127 48.0
SHI51923 Sapria himalayana HOM05D001607 ORTHO05D001893 3.5e-23 112.1 127 48.0
SHI29817 Sapria himalayana HOM05D001607 ORTHO05D001893 1.0e-22 110.5 61 78.7
SHI52151 Sapria himalayana HOM05D001607 ORTHO05D001893 1.3e-22 110.2 69 73.9
SHI29350 Sapria himalayana HOM05D001607 ORTHO05D001893 1.1e-21 107.1 103 54.4
SHI37549 Sapria himalayana HOM05D001607 ORTHO05D001893 2.8e-20 102.4 69 71.0
SHI52042 Sapria himalayana HOM05D001607 ORTHO05D001893 4.7e-20 101.7 72 68.1
SHI48664 Sapria himalayana HOM05D001607 ORTHO05D001893 8.0e-20 100.9 131 43.5
SHI43595 Sapria himalayana HOM05D001607 ORTHO05D001893 2.3e-19 99.4 69 68.1
SHI52039 Sapria himalayana HOM05D001607 ORTHO05D002419 4.0e-19 98.6 51 80.4
SHI47143 Sapria himalayana HOM05D001607 ORTHO05D365897 6.8e-19 97.8 69 68.1
SHI51473 Sapria himalayana HOM05D001607 ORTHO05D001893 6.8e-19 97.8 69 68.1
SHI52005 Sapria himalayana HOM05D001607 ORTHO05D001893 1.3e-17 93.6 110 49.1
SHI48882 Sapria himalayana HOM05D001607 ORTHO05D002419 1.1e-16 90.5 52 80.8
SHI50747 Sapria himalayana HOM05D001607 ORTHO05D001893 7.8e-15 84.3 100 48.0
SHI51730 Sapria himalayana HOM05D001607 ORTHO05D001893 7.8e-15 84.3 100 48.0
SHI49096 Sapria himalayana HOM05D001607 ORTHO05D001893 1.9e-13 79.7 61 62.3
SHI36166 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-12 77.0 51 70.6
SHI43310 Sapria himalayana HOM05D001607 ORTHO05D001893 1.6e-12 76.6 107 43.0
SHI50611 Sapria himalayana HOM05D001607 ORTHO05D001893 1.6e-12 76.6 107 43.0
SHI53834 Sapria himalayana HOM05D001607 ORTHO05D001893 1.6e-12 76.6 59 64.4
SHI47780 Sapria himalayana HOM05D001607 ORTHO05D001893 3.6e-12 75.5 89 48.3
SHI40439 Sapria himalayana HOM05D001607 ORTHO05D001893 6.2e-12 74.7 70 57.1
SHI38336 Sapria himalayana HOM05D001607 ORTHO05D001893 2.3e-11 72.8 69 56.5
SHI38367 Sapria himalayana HOM05D001607 ORTHO05D001893 2.3e-11 72.8 69 56.5
SHI35126 Sapria himalayana HOM05D001607 ORTHO05D001893 5.2e-11 71.6 73 52.1
SHI42704 Sapria himalayana HOM05D001607 ORTHO05D001893 5.2e-11 71.6 70 55.7
SHI53348 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-10 70.5 69 55.1
SHI45657 Sapria himalayana HOM05D001607 ORTHO05D001893 3.4e-10 68.9 69 53.6
SHI33455 Sapria himalayana HOM05D001607 ORTHO05D001893 1.7e-09 66.6 29 93.1
SHI50191 Sapria himalayana HOM05D001607 ORTHO05D001893 2.2e-09 66.2 29 93.1
SHI42267 Sapria himalayana HOM05D000648 ORTHO05D001893 3.7e-09 65.5 28 96.4
SHI49655 Sapria himalayana HOM05D001607 ORTHO05D001893 3.7e-09 65.5 28 96.4
Actinidia27741 Actinidia chinensis HOM05D001607 ORTHO05D001893 4.9e-09 65.1 167 28.1
SHI35008 Sapria himalayana HOM05D001607 ORTHO05D001893 6.4e-09 64.7 66 51.5
SHI34874 Sapria himalayana HOM05D001607 ORTHO05D001893 1.9e-08 63.2 28 92.9
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 1.9e-08 63.2 71 49.3
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 1.9e-08 63.2 71 49.3
SHI46226 Sapria himalayana HOM05D001607 ORTHO05D001893 3.2e-08 62.4 28 92.9
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 5.4e-08 61.6 84 42.9
SHI31542 Sapria himalayana HOM05D001607 ORTHO05D001893 7.1e-08 61.2 39 71.8
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 9.2e-08 60.8 71 47.9
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 9.2e-08 60.8 71 47.9
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 9.2e-08 60.8 71 47.9
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 9.2e-08 60.8 71 47.9
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 9.2e-08 60.8 71 47.9
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 9.2e-08 60.8 71 47.9
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 9.2e-08 60.8 71 47.9
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 9.2e-08 60.8 71 47.9
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.2e-07 60.5 71 46.5
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 1.2e-07 60.5 71 46.5
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 1.2e-07 60.5 71 46.5
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.2e-07 60.5 71 46.5
SHI35284 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-07 60.5 29 86.2
SHI50530 Sapria himalayana HOM05D011114 ORTHO05D010610 1.2e-07 60.5 29 86.2
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 45.1
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 1.6e-07 60.1 71 46.5
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 2.1e-07 59.7 71 46.5
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 2.1e-07 59.7 71 46.5
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 2.1e-07 59.7 73 46.6
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 2.1e-07 59.7 71 45.1
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 2.7e-07 59.3 71 46.5
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 2.7e-07 59.3 71 46.5
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 2.7e-07 59.3 71 43.7
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 3.5e-07 58.9 71 43.7
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 3.5e-07 58.9 71 45.1
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 3.5e-07 58.9 71 46.5
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 3.5e-07 58.9 71 45.1
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 3.5e-07 58.9 71 46.5
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 4.6e-07 58.5 71 45.1
SHI07591 Sapria himalayana HOM05D001607 ORTHO05D010610 4.6e-07 58.5 69 47.8
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 4.6e-07 58.5 71 45.1
Actinidia28326 Actinidia chinensis HOM05D001607 ORTHO05D001893 6.0e-07 58.2 71 45.1
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 6.0e-07 58.2 71 45.1
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 6.0e-07 58.2 71 45.1
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 6.0e-07 58.2 71 45.1
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 6.0e-07 58.2 32 71.9
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 6.0e-07 58.2 71 45.1
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 7.8e-07 57.8 71 43.7
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 7.8e-07 57.8 71 43.7
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 7.8e-07 57.8 71 46.5
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 7.8e-07 57.8 71 46.5
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 7.8e-07 57.8 71 45.1
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 7.8e-07 57.8 71 45.1
SHI29677 Sapria himalayana HOM05D001607 ORTHO05D001893 7.8e-07 57.8 60 51.7
SHI39452 Sapria himalayana HOM05D001607 ORTHO05D001893 7.8e-07 57.8 25 92.0
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 7.8e-07 57.8 71 45.1
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 7.8e-07 57.8 71 45.1
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.0e-06 57.4 71 46.5
SHI01470 Sapria himalayana HOM05D001607 ORTHO05D368944 1.0e-06 57.4 36 75.0
SHI34334 Sapria himalayana HOM05D001607 ORTHO05D001893 1.0e-06 57.4 111 36.0
SHI51445 Sapria himalayana HOM05D001607 ORTHO05D001893 1.0e-06 57.4 91 37.4
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 1.0e-06 57.4 71 46.5
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 1.0e-06 57.4 71 43.7
Ca_05502_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.3e-06 57.0 71 45.1
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 1.3e-06 57.0 71 45.1
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 1.3e-06 57.0 71 45.1
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-06 57.0 76 43.4
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 1.3e-06 57.0 69 44.9
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 1.3e-06 57.0 71 45.1
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 1.3e-06 57.0 71 45.1
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 1.3e-06 57.0 71 45.1
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 1.3e-06 57.0 71 45.1
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.7e-06 56.6 76 43.4
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.7e-06 56.6 71 45.1
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 1.7e-06 56.6 71 43.7
Peaxi162Scf00444g00720 Petunia axillaris HOM05D001607 ORTHO05D001893 1.7e-06 56.6 71 45.1
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 1.7e-06 56.6 71 43.7
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.7e-06 56.6 71 43.7
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 2.3e-06 56.2 71 43.7
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 2.3e-06 56.2 71 43.7
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 2.3e-06 56.2 71 43.7
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 2.3e-06 56.2 71 43.7
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 2.3e-06 56.2 71 42.3
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 2.3e-06 56.2 71 43.7
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 2.3e-06 56.2 76 44.7
SHI17500 Sapria himalayana HOM05D001607 ORTHO05D001893 2.3e-06 56.2 51 54.9
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 3.0e-06 55.8 71 43.7
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 3.0e-06 55.8 71 45.1
SHI42480 Sapria himalayana HOM05D001607 ORTHO05D001893 3.0e-06 55.8 61 50.8
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 3.0e-06 55.8 76 42.1
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 3.9e-06 55.5 71 42.3
ClCG00G002810 Citrullus lanatus HOM05D001607 ORTHO05D001893 3.9e-06 55.5 67 43.3
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 3.9e-06 55.5 69 44.9
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 5.1e-06 55.1 73 45.2
SHI12973 Sapria himalayana HOM05D001607 ORTHO05D001893 5.1e-06 55.1 69 44.9
SHI50518 Sapria himalayana HOM05D001607 ORTHO05D010610 5.1e-06 55.1 30 73.3
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 6.6e-06 54.7 71 43.7
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 8.6e-06 54.3 71 42.3
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 8.6e-06 54.3 71 42.3
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 8.6e-06 54.3 71 43.7
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 8.6e-06 54.3 71 43.7
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 8.6e-06 54.3 71 42.3
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 8.6e-06 54.3 71 42.3
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 8.6e-06 54.3 76 40.8
SHI38321 Sapria himalayana HOM05D001607 ORTHO05D001893 8.6e-06 54.3 69 44.9
SHI53323 Sapria himalayana HOM05D001607 ORTHO05D010610 8.6e-06 54.3 42 54.8


User provided reference genes

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