Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 2.0e-214 748.8 372 100.0
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 1.5e-68 264.2 174 79.9
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 3.1e-50 203.4 114 89.5
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 2.0e-49 200.7 113 91.2
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 2.0e-49 200.7 113 91.2
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.0e-49 200.7 113 91.2
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.0e-49 200.7 113 91.2
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 2.0e-49 200.7 113 91.2
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 4.5e-49 199.5 113 90.3
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 1.3e-48 198.0 113 90.3
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-48 197.2 113 90.3
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-48 197.2 113 90.3
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-48 197.2 113 90.3
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 5.5e-47 192.6 113 88.5
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 9.3e-47 191.8 112 88.4
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 9.3e-47 191.8 116 87.1
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 4.6e-46 189.5 114 87.7
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 7.9e-46 188.7 113 87.6
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 8.7e-45 185.3 102 93.1
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.4e-42 177.9 98 91.8
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 9.0e-42 175.3 112 79.5
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 2.6e-41 173.7 107 84.1
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 9.3e-39 165.2 96 90.6
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 2.7e-38 163.7 120 75.0
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.5e-36 157.9 96 87.5
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.3e-36 156.8 116 71.6
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.3e-35 154.8 93 88.2
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.4e-34 150.6 96 82.3
Hma1.2p1_0045F.1_g026530 Hydrangea macrophylla HOM05D000963 ORTHO05D005131 2.2e-27 127.5 84 78.6
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.7e-24 117.9 80 77.5
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 5.0e-24 116.3 74 82.4
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 5.0e-24 116.3 65 89.2
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 6.5e-24 115.9 64 90.6
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 6.5e-24 115.9 64 90.6
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 6.5e-24 115.9 64 90.6
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 6.5e-24 115.9 65 89.2
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 6.5e-24 115.9 64 90.6
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 6.5e-24 115.9 64 90.6
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 6.5e-24 115.9 64 90.6
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 3.2e-23 113.6 67 83.6
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 3.2e-23 113.6 65 84.6
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.2e-23 113.6 64 87.5
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 5.5e-23 112.8 110 59.1
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 9.4e-23 112.1 64 89.1
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.2e-22 111.7 64 87.5
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 4.7e-22 109.8 64 84.4
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.1e-22 109.4 99 62.6
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 2.3e-21 107.5 68 77.9
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.7e-21 105.9 64 84.4
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 6.7e-21 105.9 64 85.9
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.1e-20 105.1 87 65.5
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.5e-20 104.8 68 79.4
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.0e-20 104.4 64 82.8
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.0e-20 104.4 69 78.3
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.0e-20 104.4 80 73.8
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 4.4e-20 103.2 91 65.9
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 9.7e-20 102.1 64 79.7
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 9.7e-20 102.1 57 84.2
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 8.2e-19 99.0 70 71.4
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 1.4e-18 98.2 57 86.0
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 5.3e-18 96.3 51 88.2
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.6e-17 94.7 53 84.9
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 3.5e-17 93.6 64 78.1
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 7.7e-17 92.4 63 74.6
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.0e-16 92.0 56 80.4
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 1.0e-16 92.0 103 52.4
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 6.5e-16 89.4 64 73.4
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 1.9e-15 87.8 69 63.8
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 2.7e-14 84.0 120 48.3
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 6.1e-14 82.8 59 69.5
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.3e-13 80.9 49 75.5
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.3e-13 80.9 49 85.7
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.3e-13 80.9 49 73.5
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.7e-13 79.3 49 81.6
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 1.5e-12 78.2 57 66.7
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.4e-12 76.6 49 73.5
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 5.7e-12 76.3 43 83.7
Medtr7g093213 Medicago truncatula HOM05D000963 ORTHO05D005131 7.5e-12 75.9 40 90.0
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 9.7e-12 75.5 38 89.5
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 1.3e-11 75.1 118 46.6
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 2.8e-11 73.9 39 84.6
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 1.1e-10 72.0 150 40.0
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.1e-10 72.0 40 82.5
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.4e-10 71.6 42 71.4
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.4e-10 70.9 53 62.3
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.4e-10 70.9 52 73.1
ECA234G4679 Erigeron canadensis HOM05D000476 ORTHO05D004793 7.0e-10 69.3 36 88.9
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.2e-09 68.6 42 71.4
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-09 68.2 40 82.5
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 4.5e-09 66.6 37 75.7
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 4.5e-09 66.6 141 39.7
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 5.9e-09 66.2 64 62.5
Cfa010543 Carpinus fangiana HOM05D000963 ORTHO05D005131 1.3e-08 65.1 35 85.7
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-08 65.1 53 56.6
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 1.3e-08 65.1 37 83.8
RhsimMtG0000800 Rhododendron simsii HOM05D010604 ORTHO05D012476 3.8e-08 63.5 55 60.0
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 8.5e-08 62.4 48 66.7
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 8.5e-08 62.4 48 66.7
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 5.5e-07 59.7 48 64.6
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 5.5e-07 59.7 48 64.6
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 5.5e-07 59.7 48 64.6


User provided reference genes

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