Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37256 Sapria himalayana HOM05D010923 ORTHO05D001219 4.0e-93 344.7 173 100.0
SHI46441 Sapria himalayana HOM05D010923 ORTHO05D003989 8.2e-30 134.4 96 72.9
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 1.5e-26 123.6 111 60.4
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 2.7e-25 119.4 91 70.3
SHI32404 Sapria himalayana HOM05D000024 ORTHO05D000007 4.4e-23 112.1 87 70.1
SHI40238 Sapria himalayana HOM05D010923 ORTHO05D003989 1.0e-19 100.9 86 61.6
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 1.5e-18 97.1 48 91.7
SHI43902 Sapria himalayana HOM05D010923 ORTHO05D003989 6.1e-17 91.7 49 89.8
SHI44502 Sapria himalayana HOM05D010923 ORTHO05D003989 6.1e-17 91.7 49 89.8
SHI47575 Sapria himalayana HOM05D010923 ORTHO05D003989 6.1e-17 91.7 49 89.8
SHI48148 Sapria himalayana HOM05D010923 ORTHO05D003989 6.1e-17 91.7 49 89.8
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 6.1e-17 91.7 78 62.8
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 6.1e-17 91.7 48 93.8
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 6.1e-17 91.7 48 93.8
SHI51484 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-15 87.4 57 73.7
SHI35822 Sapria himalayana HOM05D010923 ORTHO05D003989 1.7e-14 83.6 76 59.2
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-13 80.9 76 57.9
SHI12434 Sapria himalayana HOM05D009047 ORTHO05D001219 5.4e-13 78.6 77 58.4
SHI35683 Sapria himalayana HOM05D000558 ORTHO05D001857 6.5e-11 71.6 81 50.6
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 6.5e-11 71.6 48 75.0
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 2.5e-10 69.7 107 40.2
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 2.5e-10 69.7 105 41.0
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.5e-10 69.7 105 41.0
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.5e-10 69.7 105 41.0
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 2.5e-10 69.7 105 41.0
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 2.5e-10 69.7 107 40.2
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 3.2e-10 69.3 104 41.3
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 3.2e-10 69.3 104 41.3
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 3.2e-10 69.3 107 40.2
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 3.2e-10 69.3 104 41.3
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 3.2e-10 69.3 104 41.3
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 3.2e-10 69.3 104 41.3
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 4.2e-10 68.9 104 41.3
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 4.2e-10 68.9 104 41.3
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 4.2e-10 68.9 104 41.3
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 5.5e-10 68.6 107 39.3
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 7.2e-10 68.2 68 54.4
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 9.4e-10 67.8 104 41.3
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 1.6e-09 67.0 102 38.2
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 1.6e-09 67.0 102 38.2
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 1.6e-09 67.0 102 38.2
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 1.6e-09 67.0 102 38.2
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 1.6e-09 67.0 102 38.2
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 1.6e-09 67.0 104 40.4
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.6e-09 67.0 104 40.4
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.6e-09 67.0 104 40.4
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.6e-09 67.0 104 40.4
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.6e-09 67.0 104 40.4
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 1.6e-09 67.0 104 40.4
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 1.6e-09 67.0 104 40.4
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 1.6e-09 67.0 104 40.4
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 1.6e-09 67.0 102 38.2
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 2.1e-09 66.6 104 41.3
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 2.1e-09 66.6 104 41.3
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.1e-09 66.6 104 40.4
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 2.1e-09 66.6 104 41.3
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 2.1e-09 66.6 104 40.4
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 2.7e-09 66.2 104 40.4
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 2.7e-09 66.2 107 39.3
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 3.6e-09 65.9 107 39.3
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 3.6e-09 65.9 102 37.3
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 3.6e-09 65.9 102 37.3
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 3.6e-09 65.9 102 37.3
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 3.6e-09 65.9 102 37.3
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 3.6e-09 65.9 102 37.3
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 3.6e-09 65.9 104 40.4
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 3.6e-09 65.9 104 40.4
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 3.6e-09 65.9 104 40.4
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 3.6e-09 65.9 104 40.4
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 3.6e-09 65.9 104 39.4
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 3.6e-09 65.9 104 39.4
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 4.7e-09 65.5 102 37.3
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 4.7e-09 65.5 104 40.4
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 4.7e-09 65.5 104 40.4
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 4.7e-09 65.5 104 40.4
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 4.7e-09 65.5 104 40.4
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 6.1e-09 65.1 104 40.4
SHI09671 Sapria himalayana HOM05D009047 ORTHO05D011405 6.1e-09 65.1 40 85.0
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 8.0e-09 64.7 104 40.4
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 8.0e-09 64.7 104 40.4
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 8.0e-09 64.7 107 38.3
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 8.0e-09 64.7 107 38.3
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 8.0e-09 64.7 104 39.4
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 1.0e-08 64.3 104 40.4
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 1.0e-08 64.3 104 40.4
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 1.0e-08 64.3 104 39.4
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 1.0e-08 64.3 104 39.4
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 1.0e-08 64.3 104 39.4
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 1.0e-08 64.3 104 39.4
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 1.0e-08 64.3 109 37.6
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 1.0e-08 64.3 104 39.4
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 1.0e-08 64.3 107 38.3
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 1.0e-08 64.3 104 39.4
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 1.4e-08 63.9 104 40.4
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 1.4e-08 63.9 104 39.4
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 1.4e-08 63.9 107 38.3
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 1.4e-08 63.9 104 39.4
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 1.4e-08 63.9 104 39.4
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 1.4e-08 63.9 104 39.4
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 1.4e-08 63.9 104 39.4
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 1.4e-08 63.9 104 39.4
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 38.5
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 40.4
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 40.4
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 40.4
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 38.5
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
SHI05100 Sapria himalayana HOM05D010923 ORTHO05D367389 1.8e-08 63.5 52 69.2
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 1.8e-08 63.5 104 39.4
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 2.3e-08 63.2 102 37.3
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 2.3e-08 63.2 102 36.3
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 3.0e-08 62.8 104 37.5
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 3.0e-08 62.8 103 37.9
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 3.0e-08 62.8 103 37.9
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 3.0e-08 62.8 103 37.9
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 3.0e-08 62.8 103 37.9
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 3.0e-08 62.8 103 37.9
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 3.0e-08 62.8 104 39.4
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 3.0e-08 62.8 106 42.5
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 3.0e-08 62.8 104 38.5
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 4.0e-08 62.4 102 36.3
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 4.0e-08 62.4 107 37.4
SHI43903 Sapria himalayana HOM05D000849 ORTHO05D003989 4.0e-08 62.4 29 96.6
SHI44503 Sapria himalayana HOM05D000849 ORTHO05D003989 4.0e-08 62.4 29 96.6
SHI47576 Sapria himalayana HOM05D000849 ORTHO05D003989 4.0e-08 62.4 29 96.6
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 4.0e-08 62.4 30 93.3
SHI48149 Sapria himalayana HOM05D000849 ORTHO05D003989 4.0e-08 62.4 29 96.6
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 4.0e-08 62.4 104 39.4
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 5.2e-08 62.0 104 38.5
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 5.2e-08 62.0 104 38.5
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 5.2e-08 62.0 104 38.5
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 6.8e-08 61.6 104 39.4
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 6.8e-08 61.6 104 38.5
SHI34978 Sapria himalayana HOM05D000849 ORTHO05D003989 6.8e-08 61.6 30 90.0
SHI35880 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-07 60.1 29 93.1
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 2.6e-07 59.7 104 36.5
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 2.6e-07 59.7 104 36.5
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 2.6e-07 59.7 102 35.3
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 3.4e-07 59.3 104 38.5
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 4.4e-07 58.9 104 37.5
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 4.4e-07 58.9 104 36.5
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 4.4e-07 58.9 104 36.5
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 4.4e-07 58.9 104 36.5
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 1.7e-06 57.0 104 34.6
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 1.7e-06 57.0 104 34.6
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 2.2e-06 56.6 104 34.6
SHI01895 Sapria himalayana HOM05D000849 ORTHO05D003989 2.8e-06 56.2 51 58.8
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 4.9e-06 55.5 104 33.7
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 6.3e-06 55.1 98 33.7
SHI35365 Sapria himalayana HOM05D000849 ORTHO05D003989 6.3e-06 55.1 84 36.9


User provided reference genes

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