Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-100 367.9 179 100.0
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-92 341.7 179 92.2
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 8.9e-88 327.0 179 89.9
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 3.2e-85 318.5 228 72.8
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-81 305.4 284 60.2
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-80 303.5 284 59.9
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 5.3e-80 301.2 281 59.8
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-79 299.7 267 61.4
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-79 298.5 312 55.4
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 3.2e-77 292.0 258 62.8
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 2.7e-76 288.9 311 54.3
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.8e-72 276.2 202 74.3
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 5.3e-72 274.6 303 52.5
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-71 271.9 144 91.0
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-70 267.3 143 90.9
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 4.2e-69 265.0 302 52.6
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 6.0e-68 261.2 145 89.0
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 3.3e-66 255.4 143 88.1
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 7.4e-66 254.2 143 88.1
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 7.4e-66 254.2 143 87.4
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-65 253.4 133 91.7
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-65 251.9 276 55.4
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.4e-64 250.0 142 86.6
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.4e-64 250.0 142 86.6
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 1.4e-64 250.0 143 86.0
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 2.4e-64 249.2 143 86.0
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 3.1e-64 248.8 143 86.7
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 5.3e-64 248.1 144 85.4
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.5e-63 246.5 143 84.6
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.5e-63 246.5 143 84.6
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 2.0e-63 246.1 142 85.2
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 3.4e-63 245.4 143 85.3
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 4.5e-63 245.0 158 79.7
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 4.5e-63 245.0 158 79.7
BraSC77t46636Z Brassica rapa HOM05D001560 ORTHO05D003613 4.5e-63 245.0 158 79.7
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 4.5e-63 245.0 158 79.7
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 5.8e-63 244.6 143 84.6
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.3e-62 243.4 144 85.4
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.3e-62 243.4 144 85.4
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 1.3e-62 243.4 143 83.9
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 1.3e-62 243.4 143 83.9
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 2.9e-62 242.3 143 83.9
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 3.8e-62 241.9 158 79.1
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 3.8e-62 241.9 158 79.1
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 3.8e-62 241.9 143 83.9
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 3.8e-62 241.9 158 79.1
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 6.5e-62 241.1 143 83.9
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 8.4e-62 240.7 144 84.0
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 8.4e-62 240.7 143 83.2
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 2.5e-61 239.2 143 84.6
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 5.5e-61 238.0 144 84.7
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.2e-60 236.9 143 83.9
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 1.6e-60 236.5 143 82.5
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 1.0e-59 233.8 140 85.0
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 2.3e-59 232.6 143 83.2
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 2.3e-59 232.6 143 83.2
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 3.0e-59 232.3 143 83.2
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 3.0e-59 232.3 143 83.2
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 3.0e-59 232.3 143 83.2
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 3.0e-59 232.3 143 83.2
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 3.0e-59 232.3 198 65.7
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.0e-59 232.3 158 75.3
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-59 231.1 144 80.6
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 4.8e-57 224.9 143 78.3
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.8e-56 223.0 131 84.0
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-56 222.2 275 49.5
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 7.1e-53 211.1 257 48.6
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 6.1e-52 208.0 254 48.0
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 6.1e-52 208.0 254 48.0
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 1.1e-50 203.8 125 83.2
Ah.01g011760 Amaranthus hybridus HOM05D001560 ORTHO05D003613 3.7e-49 198.7 119 84.0
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 4.1e-48 195.3 94 97.9
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-47 193.7 98 93.9
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 5.0e-46 188.3 125 75.2
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 1.1e-45 187.2 143 67.1
ECA246G4254 Erigeron canadensis HOM05D001560 ORTHO05D003613 3.2e-45 185.7 123 78.0
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 9.7e-42 174.1 143 65.0
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.7e-41 173.3 143 63.6
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-41 172.9 177 53.7
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 8.2e-41 171.0 106 78.3
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-40 169.1 231 43.7
SHI35452 Sapria himalayana HOM05D001560 ORTHO05D003613 5.5e-37 158.3 178 52.2
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 9.4e-37 157.5 225 44.0
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 4.7e-36 155.2 280 38.9
SHI34995 Sapria himalayana HOM05D001560 ORTHO05D010994 1.0e-35 154.1 86 88.4
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 2.3e-35 152.9 147 59.2
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 3.9e-35 152.1 78 87.2
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 2.6e-34 149.4 194 45.9
SHI15040 Sapria himalayana HOM05D000743 ORTHO05D003613 4.4e-34 148.7 125 61.6
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-33 146.0 72 93.1
CsaV3_UNG210430 Cucumis sativus L. HOM05D001560 ORTHO05D003613 4.1e-32 142.1 92 78.3
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-30 136.7 74 91.9
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-30 136.7 149 52.3
Oeu031732.1 Olea europaea HOM05D001560 ORTHO05D003613 2.5e-29 132.9 86 77.9
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 1.8e-27 126.7 60 98.3
Ca_14832_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.5e-26 123.6 82 79.3
Ca_22164_v3 Cicer arietinum L. HOM05D001560 ORTHO05D010874 1.5e-26 123.6 82 79.3
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 2.2e-25 119.8 116 57.8
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 6.3e-25 118.2 148 49.3
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 6.3e-25 118.2 148 49.3
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.2e-20 104.0 209 38.8
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.4e-19 100.5 123 49.6
CsaV3_1G026590 Cucumis sativus L. HOM05D001560 ORTHO05D003613 1.2e-18 97.4 62 80.6
Solyc09g056080.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 7.5e-18 94.7 60 78.3
TPR.G13006 Trifolium pratense HOM05D000569 ORTHO05D000418 4.8e-17 92.0 70 68.6
Solyc09g057830.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.4e-16 90.5 60 71.7
Nitab4.5_0002739g0100 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.8e-16 90.1 50 84.0
TPR.G33726 Trifolium pratense HOM05D001560 ORTHO05D003613 2.0e-15 86.7 65 66.2
Medtr4g057110 Medicago truncatula HOM05D001560 ORTHO05D003613 1.2e-12 77.4 58 74.1
SHI38215 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-12 77.0 35 100.0
SHI46362 Sapria himalayana HOM05D008793 ORTHO05D012151 1.6e-12 77.0 35 100.0
SHI49909 Sapria himalayana HOM05D008793 ORTHO05D012151 1.6e-12 77.0 35 100.0
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 2.1e-12 76.6 35 97.1
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 2.1e-12 76.6 35 97.1
SHI46273 Sapria himalayana HOM05D008793 ORTHO05D012151 2.1e-12 76.6 35 97.1
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 6.1e-12 75.1 35 94.3
Solyc09g056310.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.0e-11 74.3 66 62.1
SHI36937 Sapria himalayana HOM05D008793 ORTHO05D012151 2.3e-11 73.2 34 97.1
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-11 72.4 34 97.1
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 4.0e-11 72.4 35 91.4
Nitab4.5_0001152g1040 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.5e-10 70.5 55 60.0
Peaxi162Scf00122g00065 Petunia axillaris HOM05D001560 ORTHO05D003613 1.5e-10 70.5 53 66.0
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-10 70.5 35 91.4
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-10 70.1 32 96.9
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 3.4e-10 69.3 38 89.5
SHI38100 Sapria himalayana HOM05D008793 ORTHO05D012151 3.4e-10 69.3 34 94.1
SHI39990 Sapria himalayana HOM05D001560 ORTHO05D010994 3.4e-10 69.3 32 93.8
Nitab4.5_0000844g0250 Nicotiana tabacum HOM05D001560 ORTHO05D003613 7.5e-10 68.2 32 90.6
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 7.5e-10 68.2 35 91.4
SHI39754 Sapria himalayana HOM05D001560 ORTHO05D012151 7.5e-10 68.2 34 94.1
SHI36572 Sapria himalayana HOM05D001560 ORTHO05D010994 9.8e-10 67.8 34 94.1
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 1.3e-09 67.4 38 86.8
Nitab4.5_0008337g0090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.7e-09 67.0 32 90.6
PSO017G1060 Papaver somniferum HOM05D003614 ORTHO05D004156 1.7e-09 67.0 105 36.2
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 2.2e-09 66.6 108 31.5
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 2.2e-09 66.6 38 86.8
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 2.2e-09 66.6 38 86.8
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 2.2e-09 66.6 38 86.8
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 2.2e-09 66.6 38 86.8
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 2.2e-09 66.6 38 86.8
PSO017G0346 Papaver somniferum HOM05D003614 ORTHO05D004156 3.7e-09 65.9 105 36.2
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 6.3e-09 65.1 38 84.2
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 6.3e-09 65.1 38 84.2
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 6.3e-09 65.1 38 84.2
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 6.3e-09 65.1 38 84.2
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 6.3e-09 65.1 38 84.2
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 1.4e-08 63.9 35 88.6
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 2.4e-08 63.2 143 33.6
Pp3c15_3410 Physcomitrium patens HOM05D003614 ORTHO05D004156 3.1e-08 62.8 99 30.3
Pp3c2_1860 Physcomitrium patens HOM05D001560 ORTHO05D003613 1.6e-07 60.5 106 33.0
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 3.5e-07 59.3 49 63.3
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 1.0e-06 57.8 93 40.9
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-06 56.6 30 80.0
Nitab4.5_0000280g0180 Nicotiana tabacum HOM05D008793 ORTHO05D012151 8.6e-06 54.7 38 76.3


User provided reference genes

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