Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 1.6e-177 625.9 315 100.0
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 1.7e-28 131.0 314 34.1
SHI12043 Sapria himalayana HOM05D000002 ORTHO05D007327 5.3e-27 125.9 73 83.6
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 1.4e-24 117.9 275 33.1
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 2.7e-23 113.6 260 30.8
SHI07290 Sapria himalayana HOM05D000023 ORTHO05D000014 6.1e-23 112.5 66 80.3
SHI17519 Sapria himalayana HOM05D004343 ORTHO05D005695 6.1e-23 112.5 67 83.6
SHI32734 Sapria himalayana HOM05D000023 ORTHO05D000014 8.0e-23 112.1 61 85.2
SHI52964 Sapria himalayana HOM05D013702 ORTHO05D003665 3.0e-22 110.2 81 70.4
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 3.9e-22 109.8 266 31.2
SHI24036 Sapria himalayana HOM05D013702 ORTHO05D003665 1.5e-21 107.8 66 77.3
SHI02702 Sapria himalayana HOM05D003301 ORTHO05D003665 5.7e-21 105.9 60 85.0
SHI15351 Sapria himalayana HOM05D013702 ORTHO05D003665 3.7e-20 103.2 59 81.4
SHI00073 Sapria himalayana HOM05D001092 ORTHO05D000923 4.8e-20 102.8 65 76.9
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 6.3e-20 102.4 59 81.4
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 2.4e-19 100.5 261 30.3
SHI15386 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-19 100.1 59 79.7
SHI27854 Sapria himalayana HOM05D013702 ORTHO05D003665 2.0e-18 97.4 59 78.0
SHI25270 Sapria himalayana HOM05D004977 ORTHO05D006454 2.6e-18 97.1 54 79.6
SHI20812 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-17 92.8 63 73.0
SHI06749 Sapria himalayana HOM05D004086 ORTHO05D004641 8.5e-17 92.0 57 78.9
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 1.5e-16 91.3 266 32.7
SHI02700 Sapria himalayana HOM05D003301 ORTHO05D003665 1.9e-16 90.9 58 72.4
SHI02292 Sapria himalayana HOM05D000023 ORTHO05D000002 5.5e-16 89.4 69 62.3
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 9.4e-16 88.6 241 34.9
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 9.4e-16 88.6 256 32.0
SHI04614 Sapria himalayana HOM05D000024 ORTHO05D000014 1.2e-15 88.2 66 68.2
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 1.6e-15 87.8 68 58.8
SHI14999 Sapria himalayana HOM05D005377 ORTHO05D003034 2.1e-15 87.4 51 78.4
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 4.7e-15 86.3 61 60.7
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 4.7e-15 86.3 61 60.7
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 4.7e-15 86.3 61 62.3
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 4.7e-15 86.3 61 62.3
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 6.1e-15 85.9 254 29.5
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 6.1e-15 85.9 259 29.7
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 8.0e-15 85.5 192 30.2
SHI46266 Sapria himalayana HOM05D003583 ORTHO05D004169 1.0e-14 85.1 52 76.9
SHI46763 Sapria himalayana HOM05D003583 ORTHO05D004169 1.0e-14 85.1 52 76.9
SHI18215 Sapria himalayana HOM05D013702 ORTHO05D003665 1.4e-14 84.7 46 84.8
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 3.0e-14 83.6 67 56.7
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 3.0e-14 83.6 63 57.1
SHI16025 Sapria himalayana HOM05D000030 ORTHO05D000009 3.0e-14 83.6 46 82.6
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 4.0e-14 83.2 254 33.1
SHI32817 Sapria himalayana HOM05D000105 ORTHO05D003665 4.0e-14 83.2 46 82.6
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 6.7e-14 82.4 68 60.3
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 6.7e-14 82.4 255 28.2
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 8.8e-14 82.0 194 29.9
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 1.2e-13 81.6 66 56.1
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 1.5e-13 81.3 63 55.6
SHI12617 Sapria himalayana HOM05D001217 ORTHO05D001097 1.5e-13 81.3 61 63.9
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 2.0e-13 80.9 257 30.0
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 2.6e-13 80.5 262 29.0
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 3.3e-13 80.1 214 31.3
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 3.3e-13 80.1 66 57.6
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 4.4e-13 79.7 231 29.4
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 4.4e-13 79.7 42 88.1
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 7.5e-13 79.0 63 54.0
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 7.5e-13 79.0 63 54.0
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 2.8e-12 77.0 208 30.3
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 4.8e-12 76.3 63 52.4
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 4.8e-12 76.3 60 53.3
SHI02781 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-11 75.1 45 77.8
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 1.4e-11 74.7 248 25.0
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 1.4e-11 74.7 66 48.5
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 1.4e-11 74.7 66 53.0
SHI18417 Sapria himalayana HOM05D004252 ORTHO05D005101 2.4e-11 73.9 41 82.9
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 7.0e-11 72.4 252 27.0
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-11 72.4 89 44.9
SHI12416 Sapria himalayana HOM05D001600 ORTHO05D001502 9.1e-11 72.0 47 70.2
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 1.2e-10 71.6 64 46.9
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 1.2e-10 71.6 64 46.9
SHI34075 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-10 71.6 47 70.2
SHI26238 Sapria himalayana HOM05D000240 ORTHO05D002608 1.6e-10 71.2 63 66.7
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 2.7e-10 70.5 250 25.6
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 2.7e-10 70.5 66 45.5
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 2.7e-10 70.5 255 28.6
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 3.5e-10 70.1 66 45.5
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 4.5e-10 69.7 92 38.0
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 4.5e-10 69.7 62 46.8
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 4.5e-10 69.7 66 43.9
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 7.7e-10 68.9 169 30.2
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 7.7e-10 68.9 65 49.2
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 7.7e-10 68.9 56 51.8
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 7.7e-10 68.9 255 28.2
SHI13830 Sapria himalayana HOM05D005135 ORTHO05D005810 7.7e-10 68.9 63 63.5
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 1.3e-09 68.2 69 47.8
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 2.2e-09 67.4 47 55.3
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 2.2e-09 67.4 67 40.3
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 2.2e-09 67.4 237 26.2
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 2.9e-09 67.0 63 49.2
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 3.8e-09 66.6 59 47.5
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 5.0e-09 66.2 219 27.9
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 5.0e-09 66.2 253 23.7
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 5.0e-09 66.2 59 45.8
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 6.5e-09 65.9 56 48.2
SHI02198 Sapria himalayana HOM05D006172 ORTHO05D005515 6.5e-09 65.9 66 53.0
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 8.5e-09 65.5 47 55.3
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 8.5e-09 65.5 245 28.2
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 1.1e-08 65.1 247 26.3
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 1.1e-08 65.1 263 24.7
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 1.5e-08 64.7 262 29.0
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 1.5e-08 64.7 52 51.9
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 1.5e-08 64.7 52 51.9
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 1.9e-08 64.3 56 50.0
SHI33201 Sapria himalayana HOM05D000175 ORTHO05D004574 1.9e-08 64.3 76 42.1
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 1.9e-08 64.3 62 45.2
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 1.9e-08 64.3 56 44.6
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 2.5e-08 63.9 66 50.0
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 2.5e-08 63.9 57 45.6
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 3.2e-08 63.5 40 75.0
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 5.5e-08 62.8 53 50.9
SHI03645 Sapria himalayana HOM05D012376 ORTHO05D006507 5.5e-08 62.8 38 76.3
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-08 62.8 42 69.0
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 5.5e-08 62.8 55 58.2
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 5.5e-08 62.8 253 24.1
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 7.2e-08 62.4 233 27.0
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 7.2e-08 62.4 53 49.1
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 9.4e-08 62.0 234 26.9
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 9.4e-08 62.0 234 26.9
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 1.2e-07 61.6 278 25.2
SHI08441 Sapria himalayana HOM05D012376 ORTHO05D003290 1.2e-07 61.6 59 49.2
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 1.6e-07 61.2 48 50.0
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 61.2 44 65.9
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 2.1e-07 60.8 230 27.0
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 2.1e-07 60.8 230 27.0
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 2.7e-07 60.5 51 51.0
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 2.7e-07 60.5 262 25.6
SHI04115 Sapria himalayana HOM05D000512 ORTHO05D000861 3.6e-07 60.1 38 71.1
SHI05428 Sapria himalayana HOM05D013702 ORTHO05D004169 3.6e-07 60.1 33 78.8
SHI11774 Sapria himalayana HOM05D012376 ORTHO05D006507 3.6e-07 60.1 39 71.8
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 4.7e-07 59.7 245 24.5
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 6.1e-07 59.3 51 49.0
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 6.1e-07 59.3 54 46.3
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 6.1e-07 59.3 58 44.8
SHI31465 Sapria himalayana HOM05D000251 ORTHO05D365731 6.1e-07 59.3 65 55.4
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 8.0e-07 58.9 51 49.0
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 1.0e-06 58.5 54 46.3
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 1.0e-06 58.5 200 24.5
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 1.0e-06 58.5 256 26.6
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 1.0e-06 58.5 245 25.3
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 1.4e-06 58.2 44 52.3
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 1.4e-06 58.2 41 65.9
SHI29807 Sapria himalayana HOM05D012376 ORTHO05D000014 1.4e-06 58.2 66 47.0
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 1.8e-06 57.8 54 44.4
SHI03833 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.8 39 69.2
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 2.3e-06 57.4 248 25.0
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 3.0e-06 57.0 64 45.3
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 4.0e-06 56.6 246 24.8
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 4.0e-06 56.6 249 27.3
SHI16674 Sapria himalayana HOM05D004640 ORTHO05D005489 5.2e-06 56.2 45 64.4
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 5.2e-06 56.2 49 44.9
SHI14628 Sapria himalayana HOM05D000105 ORTHO05D000023 6.8e-06 55.8 37 67.6
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 6.8e-06 55.8 58 41.4
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 8.8e-06 55.5 58 41.4


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