Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37031 Sapria himalayana HOM05D000210 ORTHO05D005611 3.0e-99 365.2 183 100.0
SHI38641 Sapria himalayana HOM05D000210 ORTHO05D005611 1.2e-71 273.5 137 97.8
SHI33437 Sapria himalayana HOM05D000210 ORTHO05D005611 1.3e-54 216.9 129 86.8
SHI40250 Sapria himalayana HOM05D000210 ORTHO05D005611 2.3e-54 216.1 144 80.6
SHI46659 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-53 213.8 161 71.4
SHI35020 Sapria himalayana HOM05D000210 ORTHO05D005611 5.4e-48 194.9 171 65.5
SHI37736 Sapria himalayana HOM05D000210 ORTHO05D005611 7.1e-48 194.5 107 90.7
Cfa006073 Carpinus fangiana HOM05D000210 ORTHO05D005611 1.6e-47 193.4 178 58.4
Atru.chr5.1322 Acer truncatum HOM05D000210 ORTHO05D005611 3.5e-47 192.2 180 56.7
MD11G1293000 Malus domestica HOM05D000210 ORTHO05D005611 1.0e-46 190.7 163 61.3
CiPaw.07G096700 Carya illinoinensis HOM05D000210 ORTHO05D005611 1.3e-46 190.3 176 58.0
SHI38773 Sapria himalayana HOM05D000210 ORTHO05D005611 3.0e-46 189.1 137 75.2
QL12p023065 Quercus lobata HOM05D000210 ORTHO05D005611 1.1e-45 187.2 163 57.7
CANSAT25G2778 Cannabis sativa HOM05D000210 ORTHO05D005611 1.9e-45 186.4 168 57.1
Prupe.8G248400 Prunus persica HOM05D000210 ORTHO05D005611 1.9e-45 186.4 164 57.9
Dinv11271 Davidia involucrata HOM05D000210 ORTHO05D005611 4.3e-45 185.3 166 57.8
Sabra14G0103200 Salix brachista HOM05D000210 ORTHO05D005611 7.3e-45 184.5 166 56.0
Gohir.D08G202984 Gossypium hirsutum HOM05D000210 ORTHO05D005611 9.6e-45 184.1 164 59.1
SHI47592 Sapria himalayana HOM05D000210 ORTHO05D005611 9.6e-45 184.1 156 66.0
Gorai.004G214900 Gossypium raimondii HOM05D000210 ORTHO05D005611 1.6e-44 183.3 164 59.1
Potri.014G136800 Populus trichocarpa HOM05D000210 ORTHO05D005611 1.6e-44 183.3 166 56.6
RcHm_v2.0_Chr6g0292061 Rosa chinensis HOM05D000210 ORTHO05D005611 1.6e-44 183.3 164 57.3
Ciclev10019466m.g Citrus clementina HOM05D000210 ORTHO05D005611 1.8e-43 179.9 165 58.2
TAR633G2129 Trochodendron aralioides HOM05D000210 ORTHO05D005611 6.9e-43 177.9 163 56.4
FAN15G3364 Fragaria x ananassa HOM05D000210 ORTHO05D005611 9.0e-43 177.6 164 56.1
GSVIVG01011052001 Vitis vinifera HOM05D000210 ORTHO05D005611 1.2e-42 177.2 165 55.8
SHI15997 Sapria himalayana HOM05D000210 ORTHO05D005611 2.0e-42 176.4 111 82.0
FvH4_2g24250 Fragaria vesca HOM05D000210 ORTHO05D005611 2.6e-42 176.0 164 56.1
FAN24G2823 Fragaria x ananassa HOM05D000210 ORTHO05D005611 4.4e-42 175.3 164 55.5
SHI48130 Sapria himalayana HOM05D000210 ORTHO05D005611 2.9e-41 172.6 168 59.5
arahy.Tifrunner.gnm1.ann1.2F1JWB Arachis hypogaea HOM05D002837 ORTHO05D005611 4.9e-41 171.8 163 57.1
Duzib138G1044 Durio zibethinus HOM05D000210 ORTHO05D005611 8.4e-41 171.0 164 54.9
Nn4g26117 Nelumbo nucifera HOM05D000210 ORTHO05D005611 8.4e-41 171.0 162 55.6
Thecc.01G286500 Theobroma cacao HOM05D000210 ORTHO05D005611 1.1e-40 170.6 165 55.2
TPR.G32800 Trifolium pratense HOM05D000210 ORTHO05D005611 1.1e-40 170.6 164 54.9
Ah.08g212840 Amaranthus hybridus HOM05D000210 ORTHO05D005611 3.2e-40 169.1 161 56.5
Psat3g066840 Pisum sativum HOM05D000210 ORTHO05D005611 5.4e-40 168.3 166 56.6
Glyma.03G149400 Glycine max HOM05D000210 ORTHO05D005611 1.2e-39 167.2 165 53.9
Lj1C42G11 Lonicera japonica HOM05D000210 ORTHO05D005611 1.2e-39 167.2 165 53.3
Phvul.001G147300 Phaseolus vulgaris HOM05D000210 ORTHO05D005611 2.7e-39 166.0 176 52.3
VMungo1383G3377 Vigna mungo HOM05D000210 ORTHO05D005611 1.0e-38 164.1 165 53.9
Hund05363 Selenicereus undatus HOM05D000210 ORTHO05D005611 5.1e-38 161.8 163 52.8
CSS0026102 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 6.6e-38 161.4 165 52.1
SHI45120 Sapria himalayana HOM05D000210 ORTHO05D005611 6.6e-38 161.4 166 59.0
Eucgr.K03410 Eucalyptus grandis HOM05D000210 ORTHO05D005611 1.1e-37 160.6 179 49.2
Actinidia21087 Actinidia chinensis HOM05D000210 ORTHO05D005611 1.9e-37 159.8 165 52.1
vmacro14947 Vaccinium macrocarpon HOM05D000210 ORTHO05D005611 3.3e-37 159.1 164 53.0
Lj1g0017777 Lotus japonicus HOM05D000210 ORTHO05D005611 5.6e-37 158.3 162 53.1
Medtr7g094190 Medicago truncatula HOM05D000210 ORTHO05D005611 9.6e-37 157.5 163 54.0
SHI49784 Sapria himalayana HOM05D000210 ORTHO05D005611 1.4e-35 153.7 97 81.4
CSS0038921 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 9.0e-35 151.0 165 49.1
arahy.Tifrunner.gnm1.ann1.Q48K4T Arachis hypogaea HOM05D002837 ORTHO05D005611 1.2e-34 150.6 149 55.7
SHI01933 Sapria himalayana HOM05D000210 ORTHO05D005611 1.2e-34 150.6 142 60.6
SHI35107 Sapria himalayana HOM05D000210 ORTHO05D005611 1.2e-34 150.6 107 72.0
SEGI_08565 Sequoiadendron giganteum HOM05D000210 ORTHO05D005611 1.5e-34 150.2 162 48.8
AUR62034578 Chenopodium quinoa HOM05D000210 ORTHO05D005611 2.6e-34 149.4 173 49.1
SHI06055 Sapria himalayana HOM05D000210 ORTHO05D005611 7.6e-34 147.9 85 85.9
CDE09G1445 Ceratophyllum demersum HOM05D000210 ORTHO05D005611 9.9e-34 147.5 174 46.0
SHI03543 Sapria himalayana HOM05D000210 ORTHO05D005611 1.3e-33 147.1 92 81.5
Eucgr.K03411 Eucalyptus grandis HOM05D000210 ORTHO05D005611 2.9e-33 146.0 147 54.4
SHI49438 Sapria himalayana HOM05D000210 ORTHO05D005611 2.9e-33 146.0 137 59.9
SHI37091 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-32 144.1 96 77.1
SHI28943 Sapria himalayana HOM05D000210 ORTHO05D005611 2.4e-32 142.9 99 74.7
Haze_04777 Corylus avellana HOM05D000210 ORTHO05D005611 9.3e-32 141.0 161 49.7
CSS0008686 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 7.9e-31 137.9 142 51.4
SHI48673 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-29 134.0 86 79.1
arahy.Tifrunner.gnm1.ann1.11MVEE Arachis hypogaea HOM05D000210 ORTHO05D005611 1.9e-29 133.3 175 43.4
arahy.Tifrunner.gnm1.ann1.CG37GB Arachis hypogaea HOM05D000210 ORTHO05D005611 2.5e-29 132.9 175 43.4
SHI47298 Sapria himalayana HOM05D000210 ORTHO05D005611 5.3e-27 125.2 137 55.5
SHI32945 Sapria himalayana HOM05D000210 ORTHO05D005611 7.6e-26 121.3 161 48.4
SHI51420 Sapria himalayana HOM05D000210 ORTHO05D005611 2.2e-25 119.8 119 57.1
SHI50019 Sapria himalayana HOM05D000210 ORTHO05D005611 8.4e-25 117.9 120 60.0
SHI38302 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-24 117.5 181 47.0
SHI48059 Sapria himalayana HOM05D000210 ORTHO05D005611 4.2e-24 115.5 151 49.0
SHI42430 Sapria himalayana HOM05D000210 ORTHO05D005611 9.3e-24 114.4 124 54.0
MSTRG.21588 Avicennia marina HOM05D000210 ORTHO05D005611 1.2e-23 114.0 108 54.6
SHI53918 Sapria himalayana HOM05D000210 ORTHO05D005611 2.1e-23 113.2 65 84.6
Manes.01G211600 Manihot esculenta HOM05D000210 ORTHO05D005611 2.3e-22 109.8 90 58.9
SHI51201 Sapria himalayana HOM05D000210 ORTHO05D005611 2.5e-21 106.3 60 85.0
MBI17_g12076_MAGBIO Magnolia biondii HOM05D000210 ORTHO05D005611 3.3e-21 105.9 159 40.3
SHI45297 Sapria himalayana HOM05D000210 ORTHO05D005611 5.6e-21 105.1 60 83.3
Medtr7g094330 Medicago truncatula HOM05D000210 ORTHO05D005611 1.1e-19 100.9 118 49.2
SHI52541 Sapria himalayana HOM05D000210 ORTHO05D005611 1.2e-18 97.4 52 84.6
Os05g0143800 Oryza sativa ssp. japonica HOM05D000210 ORTHO05D005611 2.6e-18 96.3 108 45.4
SHI51828 Sapria himalayana HOM05D000210 ORTHO05D005611 4.5e-18 95.5 60 78.3
SHI52129 Sapria himalayana HOM05D000210 ORTHO05D005611 4.5e-18 95.5 60 78.3
Ca_08554_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 7.6e-18 94.7 146 39.7
Ca_08588_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 7.6e-18 94.7 146 39.7
COL.COLO4_09151 Corchorus olitorius HOM05D000210 ORTHO05D005611 1.0e-17 94.4 69 60.9
SHI25125 Sapria himalayana HOM05D000210 ORTHO05D005611 1.0e-17 94.4 49 87.8
SHI48848 Sapria himalayana HOM05D000210 ORTHO05D005611 1.0e-17 94.4 51 88.2
Gohir.A08G184800 Gossypium hirsutum HOM05D000210 ORTHO05D005611 1.3e-17 94.0 64 67.2
SHI47844 Sapria himalayana HOM05D000210 ORTHO05D005611 1.3e-17 94.0 118 53.4
SHI35778 Sapria himalayana HOM05D000210 ORTHO05D005611 1.7e-17 93.6 65 78.5
SHI50973 Sapria himalayana HOM05D000210 ORTHO05D005611 1.7e-17 93.6 60 78.3
SHI25126 Sapria himalayana HOM05D000210 ORTHO05D005611 6.0e-15 85.1 54 79.6
SHI37216 Sapria himalayana HOM05D000210 ORTHO05D005611 7.9e-15 84.7 56 78.6
SHI30997 Sapria himalayana HOM05D000210 ORTHO05D005611 1.8e-14 83.6 46 84.8
Actinidia24867 Actinidia chinensis HOM05D000210 ORTHO05D005611 1.3e-12 77.4 85 47.1
SHI25127 Sapria himalayana HOM05D000210 ORTHO05D037534 1.3e-12 77.4 43 88.4
Cpa.g.sc9.135 Carica papaya HOM05D000210 ORTHO05D005611 2.0e-10 70.1 53 67.9
SHI50845 Sapria himalayana HOM05D000210 ORTHO05D005611 2.6e-10 69.7 37 86.5
Lj9A591T86 Lonicera japonica HOM05D000210 ORTHO05D001446 3.4e-10 69.3 165 29.1
Gorai.007G106500 Gossypium raimondii HOM05D000210 ORTHO05D001446 5.9e-10 68.6 180 27.2
AagrBONN_evm.TU.Sc2ySwM_344.1107 Anthoceros agrestis HOM05D000210 ORTHO05D001446 7.7e-10 68.2 157 29.3
AUR62004459 Chenopodium quinoa HOM05D000210 ORTHO05D001446 7.7e-10 68.2 165 26.7
Zm00001eb358430 Zea mays HOM05D000210 ORTHO05D001446 7.7e-10 68.2 168 27.4
Pp3c10_20960 Physcomitrium patens HOM05D000210 ORTHO05D000247 1.0e-09 67.8 164 29.9
SHI36274 Sapria himalayana HOM05D000210 ORTHO05D005611 1.0e-09 67.8 38 84.2
AagrBONN_evm.TU.Sc2ySwM_344.1104 Anthoceros agrestis HOM05D000210 ORTHO05D001446 1.7e-09 67.0 166 26.5
ECA236G1824 Erigeron canadensis HOM05D000210 ORTHO05D001446 3.8e-09 65.9 166 26.5
Lalb_Chr10g0100341 Lupinus albus HOM05D000210 ORTHO05D001446 3.8e-09 65.9 165 27.3
CDE02G4040 Ceratophyllum demersum HOM05D000210 ORTHO05D005611 5.0e-09 65.5 130 32.3
AUR62023490 Chenopodium quinoa HOM05D000210 ORTHO05D001446 6.5e-09 65.1 168 26.2
Gohir.D11G100300 Gossypium hirsutum HOM05D000210 ORTHO05D001446 6.5e-09 65.1 180 26.7
Manes.01G248400 Manihot esculenta HOM05D000210 ORTHO05D001446 6.5e-09 65.1 163 26.4
EL10Ac1g00308 Beta vulgaris HOM05D000210 ORTHO05D001446 8.5e-09 64.7 167 25.7
BolC6t35477H Brassica oleracea HOM05D000210 ORTHO05D000247 1.1e-08 64.3 165 26.7
BcaC08g43077 Brassica carinata HOM05D000210 ORTHO05D000247 1.4e-08 63.9 164 25.6
C06p03360 Brassica napus HOM05D000210 ORTHO05D000247 1.4e-08 63.9 164 25.6
Ca_09496_v3 Cicer arietinum L. HOM05D000210 ORTHO05D001446 1.4e-08 63.9 165 27.9
SHI28942 Sapria himalayana HOM05D000210 ORTHO05D037534 1.4e-08 63.9 36 88.9
SHI35779 Sapria himalayana HOM05D000210 ORTHO05D005611 1.4e-08 63.9 37 81.1
Zm00001eb344950 Zea mays HOM05D000210 ORTHO05D001446 1.4e-08 63.9 165 27.9
AUR62023491 Chenopodium quinoa HOM05D000210 ORTHO05D001446 2.5e-08 63.2 164 24.4
Sc01g0002950 Simmondsia chinensis HOM05D000210 ORTHO05D001446 3.2e-08 62.8 164 25.6
BraA06t23627Z Brassica rapa HOM05D000210 ORTHO05D000247 4.2e-08 62.4 168 28.6
TAR374G0956 Trochodendron aralioides HOM05D000210 ORTHO05D001446 4.2e-08 62.4 164 25.6
SMO364G0213 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 5.5e-08 62.0 163 27.6
AagrBONN_evm.TU.Sc2ySwM_344.1105 Anthoceros agrestis HOM05D000210 ORTHO05D000247 7.2e-08 61.6 165 26.1
A06p04240 Brassica napus HOM05D000210 ORTHO05D000247 9.4e-08 61.2 168 28.6
Oeu017443.1 Olea europaea HOM05D000210 ORTHO05D001446 9.4e-08 61.2 162 25.9
Sed0000809 Sechium edule HOM05D000210 ORTHO05D001446 9.4e-08 61.2 164 28.7
Hund27219 Selenicereus undatus HOM05D000210 ORTHO05D001446 9.4e-08 61.2 167 26.3
BcaC01g03042 Brassica carinata HOM05D000210 ORTHO05D001446 1.2e-07 60.8 166 27.1
A03p45680 Brassica napus HOM05D000210 ORTHO05D001446 1.2e-07 60.8 166 27.1
C03p56770 Brassica napus HOM05D000210 ORTHO05D001446 1.2e-07 60.8 166 27.1
BolC3t17959H Brassica oleracea HOM05D000210 ORTHO05D001446 1.2e-07 60.8 166 27.1
BraA03t13700Z Brassica rapa HOM05D000210 ORTHO05D001446 1.2e-07 60.8 166 27.1
C06p03340 Brassica napus HOM05D000210 ORTHO05D041804 1.6e-07 60.5 108 31.5
CSS0048352 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 1.6e-07 60.5 163 23.3
unitig_899.g14809 Utricularia gibba HOM05D000210 ORTHO05D001446 1.6e-07 60.5 162 25.3
CDE09G0944 Ceratophyllum demersum HOM05D000210 ORTHO05D001446 2.1e-07 60.1 165 26.1
SHI48821 Sapria himalayana HOM05D000210 ORTHO05D005611 2.7e-07 59.7 42 71.4
Aa31LG1G6430 Aethionema arabicum HOM05D000210 ORTHO05D000247 3.6e-07 59.3 165 26.7
AUR62004458 Chenopodium quinoa HOM05D000210 ORTHO05D001446 3.6e-07 59.3 166 25.9
BcaB05g22055 Brassica carinata HOM05D000210 ORTHO05D000247 4.6e-07 58.9 170 25.3
CDE02G1249 Ceratophyllum demersum HOM05D000210 ORTHO05D001446 4.6e-07 58.9 163 24.5
Manes.05G025500 Manihot esculenta HOM05D000210 ORTHO05D001446 4.6e-07 58.9 162 25.3
SMO319G0002 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 4.6e-07 58.9 162 27.8
BolC6t35475H Brassica oleracea HOM05D000210 ORTHO05D041804 7.9e-07 58.2 108 30.6
Lsat_1_v5_gn_4_34281 Lactuca sativa HOM05D000210 ORTHO05D001446 7.9e-07 58.2 165 26.1
QL04p056157 Quercus lobata HOM05D000210 ORTHO05D001446 7.9e-07 58.2 163 25.2
SEGI_34120 Sequoiadendron giganteum HOM05D000210 ORTHO05D005611 1.0e-06 57.8 170 28.2
Lalb_Chr10g0100281 Lupinus albus HOM05D000210 ORTHO05D001446 1.8e-06 57.0 164 24.4
SHI50213 Sapria himalayana HOM05D000210 ORTHO05D005611 1.8e-06 57.0 42 69.0
SMO115G0282 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 1.8e-06 57.0 159 25.8
A06p04250 Brassica napus HOM05D000210 ORTHO05D000247 2.3e-06 56.6 165 24.8
BraA06t23628Z Brassica rapa HOM05D000210 ORTHO05D000247 2.3e-06 56.6 165 24.8
A05p01430 Brassica napus HOM05D000210 ORTHO05D001446 3.0e-06 56.2 165 24.8
BolC4t21811H Brassica oleracea HOM05D000210 ORTHO05D001446 3.0e-06 56.2 165 24.8
BraA05t19139Z Brassica rapa HOM05D000210 ORTHO05D001446 3.0e-06 56.2 165 24.8
CARHR141640 Cardamine hirsuta HOM05D000210 ORTHO05D001446 3.0e-06 56.2 165 26.1
Sp4g28400 Schrenkiella parvula HOM05D000210 ORTHO05D001446 3.0e-06 56.2 165 25.5
BcaC02g12693 Brassica carinata HOM05D000210 ORTHO05D001446 3.9e-06 55.8 165 24.8
SMO298G0064 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 3.9e-06 55.8 156 30.8
CSS0049225 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D001446 5.1e-06 55.5 152 24.3
SMO012G0013 Selaginella moellendorffii HOM05D000210 ORTHO05D374213 5.1e-06 55.5 155 29.0
SMO298G0023 Selaginella moellendorffii HOM05D000210 ORTHO05D000247 5.1e-06 55.5 155 29.7
AagrBONN_evm.TU.Sc2ySwM_117.3131 Anthoceros agrestis HOM05D000210 ORTHO05D000247 6.7e-06 55.1 163 26.4
C04p01590 Brassica napus HOM05D000210 ORTHO05D001446 8.8e-06 54.7 165 24.2
Thhalv10001373m.g Eutrema salsugineum HOM05D000210 ORTHO05D001446 8.8e-06 54.7 165 24.8


User provided reference genes

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