Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36890 Sapria himalayana HOM05D000963 ORTHO05D005131 5.6e-95 350.9 172 100.0
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 1.2e-86 323.2 179 91.1
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 2.3e-72 275.8 180 77.8
arahy.Tifrunner.gnm1.ann1.LWFR1C Arachis hypogaea HOM05D000963 ORTHO05D005131 2.4e-66 255.8 150 88.0
MBI08_g48228_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 9.9e-60 233.8 137 89.1
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 3.0e-56 222.2 173 72.3
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 6.4e-51 204.5 149 75.2
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 1.9e-50 203.0 129 79.8
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 1.9e-50 203.0 129 79.8
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 1.9e-50 203.0 129 79.8
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-50 203.0 129 79.8
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-50 203.0 129 79.8
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-50 203.0 129 79.8
HPP92_028387 Vanilla planifolia HOM05D000963 ORTHO05D005131 4.2e-50 201.8 125 86.4
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 4.6e-49 198.4 115 89.6
arahy.Tifrunner.gnm1.ann1.SH46T5 Arachis hypogaea HOM05D000963 ORTHO05D005131 1.5e-47 193.4 96 95.8
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 1.6e-46 189.9 129 76.0
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 3.7e-46 188.7 112 86.6
arahy.Tifrunner.gnm1.ann1.J9XL5M Arachis hypogaea HOM05D000963 ORTHO05D005131 7.9e-41 171.0 105 84.8
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.8e-38 161.8 117 73.5
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 2.2e-35 152.9 96 82.3
arahy.Tifrunner.gnm1.ann1.JE53Y0 Arachis hypogaea HOM05D000963 ORTHO05D005131 6.5e-35 151.4 95 85.3
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 1.9e-34 149.8 129 62.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.5e-34 149.4 74 98.6
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 2.5e-34 149.4 74 98.6
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.5e-34 149.4 74 98.6
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 2.5e-34 149.4 74 98.6
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 2.5e-34 149.4 74 98.6
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 1.2e-33 147.1 74 97.3
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 2.1e-33 146.4 74 97.3
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 4.6e-33 145.2 74 95.9
Sopen10g016560 Solanum pennellii HOM05D000963 ORTHO05D005131 1.0e-32 144.1 180 50.0
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.7e-30 135.6 74 90.5
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 1.8e-29 133.3 108 65.7
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 1.5e-28 130.2 116 62.1
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 9.3e-26 120.9 55 98.2
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 1.3e-24 117.1 75 84.0
Migut.D01497 Erythranthe guttata HOM05D000963 ORTHO05D005131 6.7e-24 114.8 76 82.9
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-22 110.5 170 42.4
Nitab4.5_0004533g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 6.3e-22 108.2 84 70.2
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.1e-21 107.5 170 43.5
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 1.2e-20 104.0 67 77.6
Lsat_1_v5_gn_4_99780 Lactuca sativa HOM05D000103 ORTHO05D000049 2.6e-20 102.8 48 95.8
Migut.E00963 Erythranthe guttata HOM05D000963 ORTHO05D005131 7.7e-20 101.3 55 81.8
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.2e-19 99.8 48 97.9
BraSC59t46511Z Brassica rapa HOM05D000963 ORTHO05D005131 1.9e-18 96.7 44 97.7
arahy.Tifrunner.gnm1.ann1.D10MHU Arachis hypogaea HOM05D000963 ORTHO05D005131 9.4e-18 94.4 66 75.8
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 2.1e-17 93.2 46 89.1
BolSC46t60969H Brassica oleracea HOM05D000963 ORTHO05D005131 2.3e-16 89.7 91 57.1
Gorai.002G201900 Gossypium raimondii HOM05D000963 ORTHO05D005131 5.7e-15 85.1 44 84.1
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 7.4e-15 84.7 50 86.0
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 3.7e-14 82.4 91 52.7
Gohir.D01G162740 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.7e-14 82.4 44 81.8
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 4.1e-13 79.0 73 64.4
SEGI_14910 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 5.3e-13 78.6 123 43.9
BraSC138t45524Z Brassica rapa HOM05D000963 ORTHO05D005131 9.1e-13 77.8 36 94.4
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.4e-12 75.9 46 73.9
arahy.Tifrunner.gnm1.ann1.G70FPN Arachis hypogaea HOM05D000963 ORTHO05D005131 1.0e-11 74.3 42 90.5
Gorai.003G182700 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.2e-11 73.2 43 76.7
Gorai.007G252600 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.9e-11 72.8 33 97.0
BraA07t28395Z Brassica rapa HOM05D000963 ORTHO05D005131 6.5e-11 71.6 97 48.5
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.2e-10 68.2 36 86.1
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 8.0e-09 64.7 80 48.8
TPR.G33662 Trifolium pratense HOM05D004957 ORTHO05D006741 1.8e-08 63.5 33 84.8
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 5.7e-07 58.5 26 96.2
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 9.7e-07 57.8 129 34.1
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 6.3e-06 55.1 36 72.2
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 8.2e-06 54.7 26 88.5


User provided reference genes

Program Settings