Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36791 Sapria himalayana HOM05D000616 ORTHO05D000062 4.9e-51 204.1 100 100.0
SHI10730 Sapria himalayana HOM05D000107 ORTHO05D000062 4.7e-38 161.0 91 85.7
SHI23123 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-33 146.0 90 81.1
SHI36555 Sapria himalayana HOM05D000107 ORTHO05D000062 5.6e-31 137.5 83 81.9
SHI20636 Sapria himalayana HOM05D000107 ORTHO05D000062 8.1e-30 133.7 80 78.8
SHI48388 Sapria himalayana HOM05D000616 ORTHO05D000233 3.1e-29 131.7 80 78.8
SHI23525 Sapria himalayana HOM05D000616 ORTHO05D000062 2.6e-28 128.6 80 76.2
SHI03358 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-27 126.3 71 88.7
SHI03619 Sapria himalayana HOM05D000107 ORTHO05D000062 5.4e-26 120.9 71 78.9
SHI15229 Sapria himalayana HOM05D000616 ORTHO05D000062 3.5e-25 118.2 66 84.8
SHI19623 Sapria himalayana HOM05D000107 ORTHO05D000062 6.0e-25 117.5 71 77.5
SHI19439 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-24 116.3 71 76.1
SHI02428 Sapria himalayana HOM05D000107 ORTHO05D000062 3.3e-23 111.7 90 66.7
SHI40332 Sapria himalayana HOM05D000616 ORTHO05D000062 3.3e-23 111.7 60 86.7
SHI27014 Sapria himalayana HOM05D000616 ORTHO05D000062 4.3e-23 111.3 100 59.0
SHI34586 Sapria himalayana HOM05D000107 ORTHO05D000062 4.8e-22 107.8 91 65.9
SHI36850 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-21 106.7 72 75.0
SHI00543 Sapria himalayana HOM05D000616 ORTHO05D000233 2.4e-21 105.5 67 71.6
SHI31892 Sapria himalayana HOM05D000107 ORTHO05D000062 2.4e-21 105.5 58 82.8
SHI17684 Sapria himalayana HOM05D000107 ORTHO05D000062 9.0e-21 103.6 72 72.2
SHI06577 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-20 103.2 56 83.9
SHI12065 Sapria himalayana HOM05D000616 ORTHO05D000062 7.6e-20 100.5 91 61.5
SHI41273 Sapria himalayana HOM05D000616 ORTHO05D000233 9.9e-20 100.1 69 73.9
SHI18333 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-19 99.8 56 82.1
SHI34953 Sapria himalayana HOM05D000616 ORTHO05D000233 8.4e-19 97.1 63 71.4
SHI39486 Sapria himalayana HOM05D000616 ORTHO05D000233 8.4e-19 97.1 56 78.6
SHI15197 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-18 96.7 58 77.6
SHI17705 Sapria himalayana HOM05D000107 ORTHO05D000062 1.1e-18 96.7 72 69.4
SHI14894 Sapria himalayana HOM05D000616 ORTHO05D000233 2.4e-18 95.5 68 72.1
SHI03580 Sapria himalayana HOM05D000616 ORTHO05D000233 3.2e-18 95.1 59 74.6
SHI19281 Sapria himalayana HOM05D000616 ORTHO05D000233 4.2e-18 94.7 56 76.8
SHI38509 Sapria himalayana HOM05D000616 ORTHO05D000233 4.2e-18 94.7 59 74.6
SHI41233 Sapria himalayana HOM05D000616 ORTHO05D000233 4.2e-18 94.7 70 68.6
SHI38964 Sapria himalayana HOM05D000616 ORTHO05D000233 5.4e-18 94.4 74 63.5
SHI36486 Sapria himalayana HOM05D000616 ORTHO05D000233 7.1e-18 94.0 67 64.2
SHI00496 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-17 93.2 56 78.6
SHI22217 Sapria himalayana HOM05D000616 ORTHO05D000062 1.2e-17 93.2 51 84.3
SHI26373 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-17 93.2 59 74.6
SHI38688 Sapria himalayana HOM05D000107 ORTHO05D000062 2.1e-17 92.4 61 73.8
SHI45620 Sapria himalayana HOM05D000107 ORTHO05D000062 2.7e-17 92.0 53 77.4
SHI36543 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-15 86.7 54 77.8
SHI09960 Sapria himalayana HOM05D000107 ORTHO05D000062 4.3e-15 84.7 50 82.0
SHI22480 Sapria himalayana HOM05D000616 ORTHO05D000233 4.3e-15 84.7 81 60.5
SHI39360 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-14 82.8 47 83.0
SHI38281 Sapria himalayana HOM05D000616 ORTHO05D000062 2.1e-14 82.4 54 74.1
SHI06148 Sapria himalayana HOM05D000616 ORTHO05D000233 4.8e-14 81.3 75 60.0
Rhsim07G0107900 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.1e-14 80.5 73 52.1
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.1e-14 80.5 73 52.1
SHI32091 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-13 79.7 49 75.5
Atru.chr6.157 Acer truncatum HOM05D000107 ORTHO05D000062 1.8e-13 79.3 76 51.3
SHI14104 Sapria himalayana HOM05D000616 ORTHO05D000233 2.4e-13 79.0 45 82.2
SHI39727 Sapria himalayana HOM05D000616 ORTHO05D000233 6.9e-13 77.4 64 60.9
SHI43358 Sapria himalayana HOM05D000616 ORTHO05D000062 6.9e-13 77.4 54 68.5
SHI26970 Sapria himalayana HOM05D000107 ORTHO05D000062 9.0e-13 77.0 75 60.0
SHI35915 Sapria himalayana HOM05D000107 ORTHO05D000062 9.0e-13 77.0 56 67.9
SHI13259 Sapria himalayana HOM05D000107 ORTHO05D000062 1.2e-12 76.6 81 54.3
SHI45820 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-12 76.6 61 62.3
SHI23159 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-12 76.3 78 59.0
SHI44966 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-12 76.3 61 63.9
Rhsim01G0019000 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-12 75.9 74 48.6
SHI43952 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-12 75.9 77 55.8
Atru.chr5.2083 Acer truncatum HOM05D000107 ORTHO05D000062 4.5e-12 74.7 72 50.0
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.8e-12 74.3 74 44.6
SHI47569 Sapria himalayana HOM05D000616 ORTHO05D000233 7.6e-12 73.9 61 63.9
SHI07450 Sapria himalayana HOM05D000616 ORTHO05D000233 1.0e-11 73.6 39 89.7
SHI45362 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-11 73.2 61 60.7
Ca_02225_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.1e-10 70.1 74 48.6
Ca_03083_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 48.6
Ca_03597_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 48.6
Ca_03869_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 44.6
Ca_12218_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 48.6
Ca_14973_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 48.6
Ca_23983_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 48.6
Ca_27000_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 48.6
Ca_27082_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 48.6
Ca_27182_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 74 48.6
SHI10686 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-10 69.7 92 45.7
SHI39811 Sapria himalayana HOM05D000616 ORTHO05D000062 1.4e-10 69.7 64 56.2
SHI36208 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-10 69.3 40 82.5
SHI45135 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-10 69.3 56 64.3
CANSAT80G0350 Cannabis sativa HOM05D000107 ORTHO05D000062 2.5e-10 68.9 90 43.3
SHI35895 Sapria himalayana HOM05D000616 ORTHO05D000233 2.5e-10 68.9 63 57.1
SHI16047 Sapria himalayana HOM05D000616 ORTHO05D000062 3.2e-10 68.6 45 73.3
SHI23357 Sapria himalayana HOM05D000616 ORTHO05D000233 3.2e-10 68.6 83 53.0
Ca_06534_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.2e-10 68.2 76 44.7
ECA232G3917 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.2e-10 68.2 72 44.4
SHI31605 Sapria himalayana HOM05D000107 ORTHO05D000062 4.2e-10 68.2 39 79.5
SHI41832 Sapria himalayana HOM05D000616 ORTHO05D000233 4.2e-10 68.2 45 66.7
Ca_24254_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 5.5e-10 67.8 74 47.3
HanXRQChr05g0158791 Helianthus annuus HOM05D000107 ORTHO05D000062 7.1e-10 67.4 77 48.1
HanXRQChr13g0403301 Helianthus annuus HOM05D000107 ORTHO05D000062 7.1e-10 67.4 77 48.1
SHI32661 Sapria himalayana HOM05D000616 ORTHO05D000233 7.1e-10 67.4 45 73.3
SHI38507 Sapria himalayana HOM05D000616 ORTHO05D000233 7.1e-10 67.4 84 50.0
SHI42042 Sapria himalayana HOM05D000616 ORTHO05D000233 7.1e-10 67.4 36 86.1
SHI48017 Sapria himalayana HOM05D000616 ORTHO05D000233 7.1e-10 67.4 36 86.1
SHI16358 Sapria himalayana HOM05D000616 ORTHO05D000233 9.3e-10 67.0 37 81.1
SHI25890 Sapria himalayana HOM05D000616 ORTHO05D000233 1.2e-09 66.6 61 57.4
SHI19985 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-09 66.2 39 79.5
SHI37735 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-09 66.2 77 50.6
Atru.chr3.1644 Acer truncatum HOM05D000107 ORTHO05D000062 2.1e-09 65.9 57 54.4
Ca_24323_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.1e-09 65.9 54 59.3
SHI25111 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-09 65.9 37 81.1
SHI38698 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-09 65.9 38 84.2
SHI39880 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-09 65.9 37 83.8
SHI14215 Sapria himalayana HOM05D000616 ORTHO05D000233 2.7e-09 65.5 56 62.5
SHI38610 Sapria himalayana HOM05D000107 ORTHO05D000062 2.7e-09 65.5 54 61.1
Ca_12349_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.5e-09 65.1 72 45.8
SHI16200 Sapria himalayana HOM05D000616 ORTHO05D000062 3.5e-09 65.1 47 72.3
SHI38523 Sapria himalayana HOM05D000616 ORTHO05D000062 3.5e-09 65.1 46 71.7
CANSAT21G0779 Cannabis sativa HOM05D000107 ORTHO05D000062 6.0e-09 64.3 48 56.2
PSO017G0673 Papaver somniferum HOM05D000107 ORTHO05D000062 6.0e-09 64.3 73 45.2
SHI30459 Sapria himalayana HOM05D000616 ORTHO05D000233 6.0e-09 64.3 36 83.3
TPR.G25383 Trifolium pratense HOM05D000107 ORTHO05D000062 6.0e-09 64.3 52 57.7
CANSAT80G0803 Cannabis sativa HOM05D000107 ORTHO05D000062 1.0e-08 63.5 70 42.9
SHI38595 Sapria himalayana HOM05D000107 ORTHO05D000062 1.0e-08 63.5 35 85.7
SHI38731 Sapria himalayana HOM05D000107 ORTHO05D000062 1.0e-08 63.5 35 85.7
CANSAT01G1520 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-08 63.2 70 42.9
Ca_07621_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.3e-08 63.2 74 44.6
SHI38550 Sapria himalayana HOM05D000616 ORTHO05D000062 1.8e-08 62.8 75 50.7
SHI39691 Sapria himalayana HOM05D000616 ORTHO05D000062 1.8e-08 62.8 60 58.3
SHI40810 Sapria himalayana HOM05D000616 ORTHO05D000233 1.8e-08 62.8 62 59.7
SHI35563 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-08 62.4 38 78.9
SHI37976 Sapria himalayana HOM05D000616 ORTHO05D000233 3.0e-08 62.0 36 83.3
Ca_02177_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.9e-08 61.6 74 45.9
Ca_07291_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.9e-08 61.6 52 57.7
Atru.chr5.1952 Acer truncatum HOM05D000107 ORTHO05D000062 5.1e-08 61.2 76 40.8
SHI39866 Sapria himalayana HOM05D000616 ORTHO05D000062 5.1e-08 61.2 52 61.5
SHI42212 Sapria himalayana HOM05D000616 ORTHO05D000233 5.1e-08 61.2 36 80.6
SHI49619 Sapria himalayana HOM05D000616 ORTHO05D000233 5.1e-08 61.2 36 80.6
SHI17454 Sapria himalayana HOM05D000616 ORTHO05D000233 6.7e-08 60.8 50 62.0
SHI39513 Sapria himalayana HOM05D000616 ORTHO05D000233 6.7e-08 60.8 30 86.7
SHI46070 Sapria himalayana HOM05D000616 ORTHO05D000062 6.7e-08 60.8 38 73.7
Hma1.2p1_0596F.1_g186330 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 8.7e-08 60.5 74 39.2
PSO566G0068 Papaver somniferum HOM05D000107 ORTHO05D000062 8.7e-08 60.5 73 43.8
Atru.chr11.445 Acer truncatum HOM05D000107 ORTHO05D000062 1.1e-07 60.1 92 37.0
TAR034G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.1e-07 60.1 76 40.8
Aqoxy3G01844 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.5e-07 59.7 75 42.7
SHI15542 Sapria himalayana HOM05D000107 ORTHO05D000062 1.5e-07 59.7 38 73.7
CANSAT54G2421 Cannabis sativa HOM05D000107 ORTHO05D000062 1.9e-07 59.3 43 53.5
SHI23787 Sapria himalayana HOM05D000107 ORTHO05D000062 1.9e-07 59.3 39 71.8
TPR.G24690 Trifolium pratense HOM05D000107 ORTHO05D000062 2.5e-07 58.9 90 41.1
TPR.G7303 Trifolium pratense HOM05D000107 ORTHO05D000062 2.5e-07 58.9 72 48.6
MD03G1146400 Malus domestica HOM05D000107 ORTHO05D000062 3.3e-07 58.5 70 37.1
SHI04868 Sapria himalayana HOM05D000107 ORTHO05D000062 3.3e-07 58.5 87 41.4
RcHm_v2.0_Chr6g0271091 Rosa chinensis HOM05D000107 ORTHO05D000062 4.3e-07 58.2 38 55.3
SHI07735 Sapria himalayana HOM05D000616 ORTHO05D000233 5.7e-07 57.8 29 86.2
TPR.G20581 Trifolium pratense HOM05D000107 ORTHO05D000062 5.7e-07 57.8 72 47.2
CANSAT01G1098 Cannabis sativa HOM05D000107 ORTHO05D000062 7.4e-07 57.4 55 47.3
TPR.G9027 Trifolium pratense HOM05D000107 ORTHO05D000062 7.4e-07 57.4 71 43.7
SHI06729 Sapria himalayana HOM05D000616 ORTHO05D000233 9.6e-07 57.0 76 46.1
SHI22759 Sapria himalayana HOM05D000107 ORTHO05D000062 9.6e-07 57.0 95 41.1
SHI39708 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-06 56.6 66 51.5
SHI42400 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-06 56.6 39 74.4
PSO781G0158 Papaver somniferum HOM05D000107 ORTHO05D000062 2.1e-06 55.8 68 44.1
Rhsim09G0096400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-06 55.8 74 36.5
RcHm_v2.0_Chr4g0414221 Rosa chinensis HOM05D000107 ORTHO05D000062 2.1e-06 55.8 54 46.3
SHI39577 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-06 55.8 34 79.4
CANSAT54G0015 Cannabis sativa HOM05D000107 ORTHO05D000062 2.8e-06 55.5 48 50.0
SHI09358 Sapria himalayana HOM05D000107 ORTHO05D000062 2.8e-06 55.5 90 38.9
FvH4_5g19272 Fragaria vesca HOM05D000107 ORTHO05D000062 3.7e-06 55.1 69 43.5
FvH4_6g23071 Fragaria vesca HOM05D000539 ORTHO05D000233 3.7e-06 55.1 69 43.5
ECA236G2250 Erigeron canadensis HOM05D000006 ORTHO05D000062 4.8e-06 54.7 54 46.3
TAR003G0008 Trochodendron aralioides HOM05D000107 ORTHO05D000062 4.8e-06 54.7 79 39.2
ECA247G2381 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.2e-06 53.9 69 37.7
RcHm_v2.0_Chr7g0191851 Rosa chinensis HOM05D000107 ORTHO05D000062 8.2e-06 53.9 69 34.8
SHI38143 Sapria himalayana HOM05D000616 ORTHO05D000233 8.2e-06 53.9 72 47.2


User provided reference genes

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