Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-92 341.7 163 100.0
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-92 341.7 163 100.0
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-64 247.7 176 73.9
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-56 221.1 242 53.7
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-53 212.2 226 54.4
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-52 208.8 223 54.7
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-52 207.6 159 69.2
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.6e-51 205.3 220 54.1
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-50 202.2 162 67.9
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-50 201.8 212 55.2
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-48 195.7 215 53.5
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-47 191.4 202 55.0
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-46 189.9 263 44.9
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-45 184.5 218 51.4
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-45 184.5 199 53.8
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-45 184.1 157 64.3
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-44 183.7 202 50.0
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-44 181.0 217 52.1
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 3.6e-43 178.7 255 45.9
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-43 177.9 175 56.0
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-42 175.6 200 52.0
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-40 169.9 87 90.8
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-39 164.9 87 86.2
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-39 164.9 84 90.5
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.6e-38 163.3 87 86.2
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.6e-38 163.3 87 86.2
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-38 162.9 150 60.0
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-38 162.9 150 60.0
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 7.7e-38 161.0 87 86.2
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 7.7e-38 161.0 87 86.2
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 7.7e-38 161.0 87 86.2
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 7.7e-38 161.0 87 86.2
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 7.7e-38 161.0 87 86.2
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 7.7e-38 161.0 87 86.2
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 7.7e-38 161.0 87 86.2
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.0e-37 160.6 87 85.1
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-37 160.2 87 86.2
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-37 160.2 87 86.2
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-37 160.2 87 86.2
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-37 160.2 87 86.2
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.7e-37 159.8 87 85.1
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.7e-37 159.8 87 85.1
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 2.2e-37 159.5 89 84.3
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 3.8e-37 158.7 87 85.1
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 6.5e-37 157.9 87 85.1
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 8.5e-37 157.5 87 83.9
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.1e-36 157.1 87 85.1
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.1e-36 157.1 87 85.1
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-36 157.1 87 85.1
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-36 157.1 87 85.1
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-36 157.1 87 85.1
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-36 157.1 87 85.1
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-36 157.1 87 85.1
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.1e-36 157.1 87 85.1
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.5e-36 156.8 87 83.9
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 1.5e-36 156.8 87 83.9
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.5e-36 156.8 87 83.9
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 1.5e-36 156.8 87 83.9
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 1.5e-36 156.8 87 83.9
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 2.5e-36 156.0 87 83.9
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 2.5e-36 156.0 87 83.9
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.2e-36 155.6 87 83.9
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.2e-36 155.6 87 83.9
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 4.2e-36 155.2 87 83.9
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-36 154.8 87 85.1
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 7.2e-36 154.5 87 83.9
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 9.4e-36 154.1 84 84.5
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 1.6e-35 153.3 87 82.8
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.1e-35 152.9 85 83.5
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 3.6e-35 152.1 79 89.9
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 6.1e-35 151.4 83 86.7
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 6.1e-35 151.4 87 80.5
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.1e-35 151.4 85 83.5
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.1e-35 151.4 85 83.5
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 6.1e-35 151.4 85 83.5
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 6.1e-35 151.4 85 83.5
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 3.0e-34 149.1 82 84.1
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 3.0e-34 149.1 82 84.1
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 3.0e-34 149.1 82 84.1
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 4.0e-34 148.7 85 82.4
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 4.0e-34 148.7 83 83.1
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.8e-34 147.9 84 81.0
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.8e-34 147.9 84 81.0
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.8e-34 147.9 84 81.0
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 1.5e-33 146.7 87 81.6
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 2.0e-33 146.4 83 85.5
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.6e-33 146.0 87 79.3
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-33 145.6 74 91.9
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-33 145.2 74 90.5
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-33 144.8 74 90.5
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-33 144.8 87 80.5
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 7.5e-33 144.4 77 87.0
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 1.7e-32 143.3 78 85.9
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-32 142.9 74 90.5
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-32 142.9 85 81.2
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-32 141.4 74 90.5
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 8.3e-32 141.0 74 89.2
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-30 137.1 74 87.8
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.7e-30 136.0 76 82.9
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-30 136.0 71 90.1
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 7.7e-30 134.4 72 88.9
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-29 134.0 72 87.5
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.3e-29 133.7 74 86.5
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-29 133.3 70 90.0
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 6.6e-29 131.3 74 85.1
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 8.6e-29 131.0 74 86.5
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 4.2e-28 128.6 74 83.8
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 4.2e-28 128.6 74 83.8
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 4.2e-28 128.6 74 83.8
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 4.2e-28 128.6 74 83.8
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.1e-27 126.3 72 81.9
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 3.6e-27 125.6 72 80.6
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-26 123.6 74 82.4
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 2.3e-26 122.9 71 81.7
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 5.2e-26 121.7 102 56.9
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 5.2e-26 121.7 74 78.4
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 8.9e-26 120.9 92 59.8
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-26 120.9 175 43.4
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-25 117.9 60 86.7
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-24 116.7 59 88.1
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-23 114.0 58 86.2
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-23 113.6 149 47.7
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 2.4e-23 112.8 70 75.7
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 7.0e-23 111.3 61 83.6
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.0e-23 111.3 67 76.1
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-21 107.5 174 44.8
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 2.3e-21 106.3 61 80.3
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 3.9e-21 105.5 57 87.7
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-20 102.8 68 77.9
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-20 102.4 157 45.2
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-19 98.2 56 85.7
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.4e-18 97.1 56 82.1
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-18 95.9 50 84.0
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 2.2e-16 89.7 52 76.9
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-15 87.4 45 88.9
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-15 85.9 47 78.7
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 7.8e-14 81.3 49 77.6
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-13 80.1 58 72.4
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.9e-13 79.0 44 77.3
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 3.9e-13 79.0 83 48.2
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.6e-13 78.2 44 84.1
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-11 73.2 48 72.9
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.2e-11 71.6 50 68.0
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-10 68.6 50 64.0
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 5.2e-10 68.6 61 57.4
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.5e-09 67.0 33 87.9
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 9.8e-09 64.3 37 83.8


User provided reference genes

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