Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36680 Sapria himalayana HOM05D000222 ORTHO05D000329 3.8e-47 191.4 117 100.0
SHI38624 Sapria himalayana HOM05D000222 ORTHO05D000329 2.6e-43 178.7 113 96.5
SHI01587 Sapria himalayana HOM05D000222 ORTHO05D000329 5.7e-43 177.6 136 78.7
SHI45270 Sapria himalayana HOM05D000222 ORTHO05D000329 5.4e-41 171.0 117 86.3
SHI36219 Sapria himalayana HOM05D000222 ORTHO05D000329 1.7e-39 166.0 117 76.9
SHI36263 Sapria himalayana HOM05D000222 ORTHO05D000329 5.7e-35 151.0 145 66.9
SHI38697 Sapria himalayana HOM05D000222 ORTHO05D000329 5.9e-32 141.0 138 63.0
SHI36765 Sapria himalayana HOM05D000222 ORTHO05D000329 3.0e-28 128.6 88 77.3
SHI45896 Sapria himalayana HOM05D000222 ORTHO05D000329 6.8e-28 127.5 92 83.7
SHI31449 Sapria himalayana HOM05D000222 ORTHO05D000329 8.9e-28 127.1 139 65.5
SHI45363 Sapria himalayana HOM05D000222 ORTHO05D000329 5.8e-27 124.4 92 82.6
SHI16969 Sapria himalayana HOM05D000222 ORTHO05D000329 1.6e-24 116.3 96 65.6
SHI36899 Sapria himalayana HOM05D000222 ORTHO05D000329 2.7e-24 115.5 104 62.5
SHI54403 Sapria himalayana HOM05D000222 ORTHO05D000329 1.5e-22 109.8 79 73.4
RcHm_v2.0_Chr6g0303071 Rosa chinensis HOM05D000222 ORTHO05D000329 1.9e-22 109.4 151 47.0
SHI08058 Sapria himalayana HOM05D000222 ORTHO05D000329 1.9e-22 109.4 183 43.2
Carub.0007s1690 Capsella rubella HOM05D000222 ORTHO05D000329 3.3e-22 108.6 151 47.7
FvH4_2g38300 Fragaria vesca HOM05D000222 ORTHO05D000329 3.3e-22 108.6 151 47.0
FAN15G0622 Fragaria x ananassa HOM05D000222 ORTHO05D000329 3.3e-22 108.6 151 47.0
FAN20G2674 Fragaria x ananassa HOM05D000222 ORTHO05D000329 3.3e-22 108.6 151 47.0
FAN27G0624 Fragaria x ananassa HOM05D000222 ORTHO05D000329 3.3e-22 108.6 151 47.0
Prupe.1G363900 Prunus persica HOM05D000222 ORTHO05D000329 3.3e-22 108.6 151 47.0
SHI40500 Sapria himalayana HOM05D000222 ORTHO05D000329 3.3e-22 108.6 79 73.4
CARHR231600 Cardamine hirsuta HOM05D000222 ORTHO05D000329 7.3e-22 107.5 151 47.7
MD08G1011200 Malus domestica HOM05D000222 ORTHO05D000329 7.3e-22 107.5 151 46.4
SHI45073 Sapria himalayana HOM05D000222 ORTHO05D000329 7.3e-22 107.5 79 72.2
Manes.18G012200 Manihot esculenta HOM05D000222 ORTHO05D000329 9.5e-22 107.1 151 45.0
AL7G29090 Arabidopsis lyrata HOM05D000222 ORTHO05D000329 1.6e-21 106.3 151 47.0
A08p21570 Brassica napus HOM05D000222 ORTHO05D000329 2.1e-21 105.9 151 46.4
BraA08t34104Z Brassica rapa HOM05D000222 ORTHO05D000329 2.1e-21 105.9 151 46.4
PGR083G1489 Punica granatum HOM05D000222 ORTHO05D000329 2.1e-21 105.9 151 45.0
BcaC07g38137 Brassica carinata HOM05D000222 ORTHO05D000329 2.8e-21 105.5 151 46.4
A03p55100 Brassica napus HOM05D000222 ORTHO05D000329 2.8e-21 105.5 151 46.4
BolC8t48563H Brassica oleracea HOM05D000222 ORTHO05D000329 2.8e-21 105.5 151 46.4
BraA03t14570Z Brassica rapa HOM05D000222 ORTHO05D000329 2.8e-21 105.5 151 46.4
Psat6g002360 Pisum sativum HOM05D000222 ORTHO05D000329 2.8e-21 105.5 151 45.0
SalBow8G4062 Salvia bowleyana HOM05D000222 ORTHO05D000329 2.8e-21 105.5 151 45.0
SHI25750 Sapria himalayana HOM05D000222 ORTHO05D000329 2.8e-21 105.5 96 63.5
SHI39056 Sapria himalayana HOM05D000222 ORTHO05D000329 2.8e-21 105.5 98 70.4
Aa31sc288G10 Aethionema arabicum HOM05D000222 ORTHO05D000329 3.6e-21 105.1 151 46.4
BcaC09g50898 Brassica carinata HOM05D000222 ORTHO05D000329 3.6e-21 105.1 151 46.4
BcaNung01125 Brassica carinata HOM05D000222 ORTHO05D000329 3.6e-21 105.1 151 46.4
A01p15520 Brassica napus HOM05D000222 ORTHO05D000329 3.6e-21 105.1 151 46.4
C01p19440 Brassica napus HOM05D000222 ORTHO05D000329 3.6e-21 105.1 151 46.4
BolC1t01873H Brassica oleracea HOM05D000222 ORTHO05D000329 3.6e-21 105.1 151 46.4
BraA01t01491Z Brassica rapa HOM05D000222 ORTHO05D000329 3.6e-21 105.1 151 46.4
Thhalv10024414m.g Eutrema salsugineum HOM05D000222 ORTHO05D000329 3.6e-21 105.1 151 46.4
Dinv31859 Davidia involucrata HOM05D000222 ORTHO05D000329 4.7e-21 104.8 149 50.3
Sp7g22160 Schrenkiella parvula HOM05D000222 ORTHO05D000329 4.7e-21 104.8 151 45.7
AT4G24190 Arabidopsis thaliana HOM05D000222 ORTHO05D000329 6.2e-21 104.4 151 45.7
C07p53420 Brassica napus HOM05D000222 ORTHO05D000329 6.2e-21 104.4 151 45.7
BolC7t45836H Brassica oleracea HOM05D000222 ORTHO05D000329 6.2e-21 104.4 151 45.7
SHI40420 Sapria himalayana HOM05D000222 ORTHO05D000329 6.2e-21 104.4 79 70.9
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 8.0e-21 104.0 151 44.4
Nn5g30723 Nelumbo nucifera HOM05D000222 ORTHO05D000329 8.0e-21 104.0 151 45.0
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 8.0e-21 104.0 151 43.7
MELO3C011021.2 Cucumis melo HOM05D000222 ORTHO05D000329 1.1e-20 103.6 151 44.4
Dinv39529 Davidia involucrata HOM05D000222 ORTHO05D000329 1.1e-20 103.6 151 44.4
Migut.C00851 Erythranthe guttata HOM05D000222 ORTHO05D000329 1.1e-20 103.6 151 45.0
Oeu046282.1 Olea europaea HOM05D000222 ORTHO05D000329 1.1e-20 103.6 151 45.0
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 1.1e-20 103.6 151 43.7
Sabra05G0186600 Salix brachista HOM05D000222 ORTHO05D000329 1.1e-20 103.6 151 43.7
Manes.18G012500 Manihot esculenta HOM05D000222 ORTHO05D000329 1.4e-20 103.2 151 43.0
SHI38128 Sapria himalayana HOM05D000222 ORTHO05D000329 1.4e-20 103.2 79 72.2
SHI50473 Sapria himalayana HOM05D000222 ORTHO05D017108 1.4e-20 103.2 117 65.0
Sed0003929 Sechium edule HOM05D000222 ORTHO05D000329 1.4e-20 103.2 151 44.4
SEGI_06170 Sequoiadendron giganteum HOM05D000222 ORTHO05D000329 1.4e-20 103.2 151 42.4
Thecc.08G046300 Theobroma cacao HOM05D000222 ORTHO05D000329 1.4e-20 103.2 151 44.4
TWI56G0657 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.4e-20 103.2 151 44.4
GSVIVG01009931001 Vitis vinifera HOM05D000222 ORTHO05D000329 1.4e-20 103.2 151 44.4
Aqoxy1G02465 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 1.8e-20 102.8 151 43.7
Sed0002325 Sechium edule HOM05D000222 ORTHO05D000329 1.8e-20 102.8 151 47.0
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.8e-20 102.8 151 44.4
Lsat_1_v5_gn_8_30781 Lactuca sativa HOM05D000222 ORTHO05D000329 2.3e-20 102.4 150 45.3
Nitab4.5_0000337g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 2.3e-20 102.4 151 44.4
Sc15g0004910 Simmondsia chinensis HOM05D000222 ORTHO05D000329 2.3e-20 102.4 151 43.7
MSTRG.1183 Avicennia marina HOM05D000222 ORTHO05D000329 3.1e-20 102.1 151 44.4
CsaV3_2G029630 Cucumis sativus L. HOM05D000222 ORTHO05D000329 3.1e-20 102.1 151 43.7
MBI05_g33509_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 3.1e-20 102.1 151 43.7
Nitab4.5_0003251g0080 Nicotiana tabacum HOM05D000222 ORTHO05D000329 3.1e-20 102.1 151 43.7
SHI37841 Sapria himalayana HOM05D000222 ORTHO05D000329 3.1e-20 102.1 75 74.7
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 4.0e-20 101.7 151 43.0
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 4.0e-20 101.7 151 43.0
Gohir.A06G002800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.0e-20 101.7 151 43.7
Gohir.A06G002900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.0e-20 101.7 151 43.7
Gohir.D06G005800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.0e-20 101.7 151 43.7
Gohir.D06G005900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.0e-20 101.7 151 43.7
Gorai.010G003000 Gossypium raimondii HOM05D000222 ORTHO05D000329 4.0e-20 101.7 151 43.7
HanXRQChr13g0387091 Helianthus annuus HOM05D000222 ORTHO05D000329 4.0e-20 101.7 151 45.0
Aqoxy152s001 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 43.0
Aqoxy6G02232 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 43.0
DCAR_013875 Daucus carota HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 45.0
DCAR_023014 Daucus carota HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 45.0
Duzib116G0368 Durio zibethinus HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 45.0
Eucgr.H00972 Eucalyptus grandis HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 43.0
Lalb_Chr08g0246171 Lupinus albus HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 43.0
Medtr1g025430 Medicago truncatula HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 43.0
SHI53017 Sapria himalayana HOM05D000222 ORTHO05D017108 5.2e-20 101.3 117 63.2
Hund01603 Selenicereus undatus HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 43.0
TPR.G26394 Trifolium pratense HOM05D000222 ORTHO05D000329 5.2e-20 101.3 151 43.7
arahy.Tifrunner.gnm1.ann1.P8FSM4 Arachis hypogaea HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 43.0
arahy.Tifrunner.gnm1.ann1.T76A9L Arachis hypogaea HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 43.0
MSTRG.25258 Avicennia marina HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 49.7
Glyma.14G219700 Glycine max HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 42.4
Glyma.17G258700 Glycine max HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 42.4
RhsimUnG0065400 Rhododendron simsii HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 43.7
Solyc04g081570.3 Solanum lycopersicum HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 43.7
Sopen04g035180 Solanum pennellii HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 43.7
TAR381G1457 Trochodendron aralioides HOM05D000222 ORTHO05D000329 6.8e-20 100.9 151 43.7
Lalb_Chr19g0131441 Lupinus albus HOM05D000222 ORTHO05D000329 8.9e-20 100.5 151 42.4
Nitab4.5_0000337g0070 Nicotiana tabacum HOM05D000222 ORTHO05D000329 8.9e-20 100.5 151 43.0
Phvul.001G005200 Phaseolus vulgaris HOM05D000222 ORTHO05D000329 8.9e-20 100.5 151 42.4
TAR628G0053 Trochodendron aralioides HOM05D000222 ORTHO05D000329 8.9e-20 100.5 151 43.7
Ca_13433_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 1.2e-19 100.1 151 42.4
Ca_28044_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 1.2e-19 100.1 151 42.4
Cc10_g01540 Coffea canephora HOM05D000222 ORTHO05D000329 1.2e-19 100.1 151 43.0
Migut.N03167 Erythranthe guttata HOM05D000222 ORTHO05D000329 1.2e-19 100.1 151 44.4
Hma1.2p1_0733F.1_g210310 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 1.2e-19 100.1 151 47.7
Lj4C22T9 Lonicera japonica HOM05D000222 ORTHO05D000329 1.2e-19 100.1 151 43.7
Zm00001eb272290 Zea mays HOM05D000222 ORTHO05D000329 1.2e-19 100.1 151 43.7
EL10Ac1g02175 Beta vulgaris HOM05D000222 ORTHO05D000329 1.5e-19 99.8 151 43.0
CANSAT78G1241 Cannabis sativa HOM05D000222 ORTHO05D000329 1.5e-19 99.8 151 43.0
AUR62040542 Chenopodium quinoa HOM05D000222 ORTHO05D000329 1.5e-19 99.8 151 42.4
AUR62041482 Chenopodium quinoa HOM05D000222 ORTHO05D000329 1.5e-19 99.8 151 42.4
Lalb_Chr03g0033421 Lupinus albus HOM05D000222 ORTHO05D000329 1.5e-19 99.8 151 42.4
Lalb_Chr11g0061831 Lupinus albus HOM05D000222 ORTHO05D000329 1.5e-19 99.8 151 42.4
SHI39033 Sapria himalayana HOM05D000222 ORTHO05D036578 1.5e-19 99.8 70 72.9
SHI42102 Sapria himalayana HOM05D000222 ORTHO05D036578 1.5e-19 99.8 70 72.9
Hund05159 Selenicereus undatus HOM05D000222 ORTHO05D000329 1.5e-19 99.8 151 43.7
ATR0810G217 Amborella trichopoda HOM05D000222 ORTHO05D000329 2.0e-19 99.4 151 42.4
CDE05G2968 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 2.0e-19 99.4 151 42.4
Sc02g0008650 Simmondsia chinensis HOM05D000222 ORTHO05D000329 2.0e-19 99.4 151 43.0
CAN.G311.42 Capsicum annuum HOM05D000222 ORTHO05D000329 2.6e-19 99.0 151 43.0
Duzib093G0379 Durio zibethinus HOM05D000222 ORTHO05D000329 2.6e-19 99.0 151 43.0
Lj5g0005976 Lotus japonicus HOM05D000222 ORTHO05D000329 2.6e-19 99.0 151 42.4
Zm00001eb228120 Zea mays HOM05D000222 ORTHO05D000329 2.6e-19 99.0 151 43.0
Lj4C798T7 Lonicera japonica HOM05D000222 ORTHO05D000329 3.4e-19 98.6 151 42.4
Os06g0716700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 3.4e-19 98.6 151 42.4
PSO541G0316 Papaver somniferum HOM05D000222 ORTHO05D000329 3.4e-19 98.6 151 42.4
PSO675G6717 Papaver somniferum HOM05D000222 ORTHO05D000329 3.4e-19 98.6 151 42.4
QL02p011881 Quercus lobata HOM05D000222 ORTHO05D000329 3.4e-19 98.6 151 42.4
SHI48920 Sapria himalayana HOM05D000222 ORTHO05D000329 3.4e-19 98.6 74 70.3
PGSC0003DMG400009940 Solanum tuberosum HOM05D000222 ORTHO05D000329 3.4e-19 98.6 151 43.0
HPP92_012933 Vanilla planifolia HOM05D000222 ORTHO05D000329 3.4e-19 98.6 151 43.0
VMungo0647G1547 Vigna mungo HOM05D000222 ORTHO05D000329 3.4e-19 98.6 151 41.7
SHI47293 Sapria himalayana HOM05D000222 ORTHO05D000329 4.4e-19 98.2 92 60.9
COL.COLO4_26130 Corchorus olitorius HOM05D000222 ORTHO05D000329 5.8e-19 97.8 151 42.4
HanXRQChr12g0366871 Helianthus annuus HOM05D000222 ORTHO05D000329 7.5e-19 97.4 151 41.7
CDE05G1631 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 9.8e-19 97.1 151 41.7
Peaxi162Scf00553g00086 Petunia axillaris HOM05D000222 ORTHO05D000329 9.8e-19 97.1 151 43.0
ECA233G5047 Erigeron canadensis HOM05D000222 ORTHO05D000329 1.3e-18 96.7 150 43.3
CSS0018705 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 1.7e-18 96.3 151 41.1
Gohir.A01G110500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-18 96.3 151 41.1
Gohir.D01G097100 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.7e-18 96.3 151 41.1
Gorai.002G122800 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.7e-18 96.3 151 41.1
vmacro04362 Vaccinium macrocarpon HOM05D000222 ORTHO05D000329 2.2e-18 95.9 160 41.9
Nn6g32037 Nelumbo nucifera HOM05D000222 ORTHO05D000329 2.9e-18 95.5 151 41.1
SHI30009 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-17 93.6 117 52.1
Mapoly0031s0145 Marchantia polymorpha HOM05D000222 ORTHO05D000329 7.0e-17 90.9 150 39.3
SHI36456 Sapria himalayana HOM05D000222 ORTHO05D000329 1.2e-16 90.1 66 72.7
Atru.chr13.272 Acer truncatum HOM05D000222 ORTHO05D000329 7.8e-16 87.4 106 47.2
ClCG08G014210 Citrullus lanatus HOM05D000222 ORTHO05D000329 7.8e-16 87.4 106 47.2
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 1.7e-15 86.3 106 46.2
Peaxi162Scf00553g00114 Petunia axillaris HOM05D000222 ORTHO05D000329 3.9e-15 85.1 106 46.2
MBI05_g33510_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 5.1e-15 84.7 192 33.9
TAR536G0015 Trochodendron aralioides HOM05D000222 ORTHO05D000329 6.6e-15 84.3 106 45.3
Pp3c14_3360 Physcomitrium patens HOM05D000222 ORTHO05D000329 1.5e-14 83.2 151 43.7
Psat0s1664g0080 Pisum sativum HOM05D000222 ORTHO05D000329 3.3e-14 82.0 88 53.4
SHI35748 Sapria himalayana HOM05D000222 ORTHO05D000329 3.3e-14 82.0 75 61.3
AagrBONN_evm.TU.Sc2ySwM_344.3459 Anthoceros agrestis HOM05D000222 ORTHO05D000329 7.3e-14 80.9 151 35.8
CBR_g34543 Chara braunii HOM05D000222 ORTHO05D000329 7.3e-14 80.9 150 46.7
Actinidia15430 Actinidia chinensis HOM05D000222 ORTHO05D000329 1.2e-13 80.1 85 62.4
SMO116G0137 Selaginella moellendorffii HOM05D000222 ORTHO05D000329 4.7e-13 78.2 163 44.2
Cre02.g080650 Chlamydomonas reinhardtii HOM05D000222 ORTHO05D000329 3.1e-12 75.5 159 32.1
Pp3c8_6510 Physcomitrium patens HOM05D000222 ORTHO05D000329 6.8e-12 74.3 151 30.5
SHI38167 Sapria himalayana HOM05D000222 ORTHO05D000329 2.6e-11 72.4 50 70.0
SHI47294 Sapria himalayana HOM05D000222 ORTHO05D000329 3.2e-09 65.5 97 56.7
MCO04G117 Micromonas commoda HOM05D000222 ORTHO05D000329 7.1e-09 64.3 150 43.3
SHI36780 Sapria himalayana HOM05D000222 ORTHO05D000329 9.2e-09 63.9 83 48.2
MBI19_g08241_MAGBIO Magnolia biondii HOM05D001745 ORTHO05D036578 1.2e-08 63.5 38 71.1
Thecc.08G045800 Theobroma cacao HOM05D000222 ORTHO05D000329 2.7e-08 62.4 93 44.1
SGA_v2.0_scaffold11G05934 Striga asiatica HOM05D000222 ORTHO05D000329 3.5e-08 62.0 115 41.7
SHI41830 Sapria himalayana HOM05D000222 ORTHO05D000329 4.6e-08 61.6 52 84.6
SHI42404 Sapria himalayana HOM05D000222 ORTHO05D000329 6.0e-08 61.2 51 66.7
SHI43105 Sapria himalayana HOM05D000222 ORTHO05D000329 7.8e-08 60.8 52 86.5
SHI29975 Sapria himalayana HOM05D000222 ORTHO05D000329 3.0e-07 58.9 51 62.7
MCO01G152 Micromonas commoda HOM05D000222 ORTHO05D000329 8.6e-07 57.4 153 26.8


User provided reference genes

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