Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-49 198.0 91 100.0
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 6.4e-34 147.1 70 97.1
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 4.2e-33 144.4 70 95.7
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-33 144.4 70 95.7
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 7.1e-33 143.7 70 94.3
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-32 142.1 70 94.3
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-32 141.7 67 97.0
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-32 141.7 67 97.0
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 4.6e-32 141.0 70 92.9
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-31 139.8 70 92.9
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-31 139.4 70 91.4
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-31 139.4 70 91.4
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-31 139.0 70 91.4
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-31 139.0 70 91.4
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 3.0e-31 138.3 70 91.4
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 3.0e-31 138.3 70 91.4
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 3.0e-31 138.3 70 91.4
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 3.0e-31 138.3 70 91.4
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 3.0e-31 138.3 70 91.4
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 3.0e-31 138.3 70 91.4
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 3.0e-31 138.3 70 91.4
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 3.9e-31 137.9 70 90.0
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-31 137.9 70 91.4
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.1e-31 137.5 70 91.4
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.1e-31 137.5 70 91.4
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.1e-31 137.5 70 91.4
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.1e-31 137.5 70 91.4
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 6.7e-31 137.1 70 90.0
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 6.7e-31 137.1 70 90.0
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-31 136.7 70 90.0
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-31 136.7 70 90.0
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-31 136.7 70 90.0
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-30 136.3 68 92.6
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-30 136.3 67 92.5
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-30 136.3 67 92.5
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.5e-30 136.0 70 90.0
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-30 136.0 70 90.0
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 2.5e-30 135.2 70 90.0
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 3.3e-30 134.8 86 76.7
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 4.3e-30 134.4 70 90.0
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 5.6e-30 134.0 70 88.6
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 5.6e-30 134.0 70 88.6
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 7.4e-30 133.7 70 90.0
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 7.4e-30 133.7 70 90.0
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 7.4e-30 133.7 70 88.6
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 7.4e-30 133.7 70 88.6
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 7.4e-30 133.7 70 88.6
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 7.4e-30 133.7 70 88.6
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 7.4e-30 133.7 70 88.6
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 9.6e-30 133.3 70 88.6
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 9.6e-30 133.3 70 88.6
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 9.6e-30 133.3 70 88.6
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 9.6e-30 133.3 70 88.6
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 9.6e-30 133.3 68 89.7
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 1.3e-29 132.9 70 88.6
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 1.3e-29 132.9 70 88.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-29 132.9 64 95.3
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.6e-29 132.5 70 88.6
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.6e-29 132.5 70 88.6
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 1.6e-29 132.5 70 88.6
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-29 132.5 70 90.0
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-29 131.7 67 89.6
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 3.7e-29 131.3 68 89.7
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 3.7e-29 131.3 68 89.7
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 3.7e-29 131.3 68 89.7
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 3.7e-29 131.3 68 89.7
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 4.8e-29 131.0 67 89.6
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-29 131.0 70 88.6
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 8.2e-29 130.2 70 85.7
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 1.1e-28 129.8 68 88.2
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-28 129.8 70 88.6
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-28 129.8 70 90.0
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-28 129.4 64 93.8
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 2.4e-28 128.6 68 88.2
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-28 128.6 67 88.1
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-28 128.3 67 89.6
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 5.3e-28 127.5 64 90.6
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 9.0e-28 126.7 70 85.7
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.2e-27 126.3 65 89.2
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 1.2e-27 126.3 65 89.2
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 1.2e-27 126.3 65 89.2
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 1.2e-27 126.3 65 89.2
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 1.5e-27 125.9 66 87.9
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-27 125.2 65 89.2
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-27 125.2 70 85.7
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.4e-27 124.8 67 85.1
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.4e-27 124.8 67 85.1
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.4e-27 124.8 67 85.1
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 3.4e-27 124.8 67 85.1
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-27 124.4 66 87.9
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.5e-26 120.6 68 82.4
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-26 120.6 68 85.3
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.4e-26 120.2 73 76.7
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-25 119.8 65 86.2
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 3.2e-25 118.2 83 71.1
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.0e-23 113.2 70 78.6
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.5e-22 109.4 59 86.4
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.6e-21 105.9 63 77.8
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 8.2e-21 103.6 86 60.5
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.4e-20 102.8 64 70.3
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.8e-20 102.4 63 71.4
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 1.8e-20 102.4 55 87.3
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 4.1e-20 101.3 64 75.0
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-20 101.3 52 90.4
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-19 97.1 58 81.0
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 1.2e-16 89.7 53 79.2
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-16 89.7 42 95.2
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-15 85.5 65 66.2
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 3.9e-15 84.7 44 88.6
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-15 84.0 43 88.4
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-15 84.0 41 90.2
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.3e-13 79.7 44 84.1
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-13 79.7 45 82.2
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.7e-13 78.2 44 81.8
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-11 72.0 69 53.6
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.3e-10 69.7 64 48.4
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-10 68.9 31 96.8
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-10 68.6 33 90.9
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-10 67.4 29 100.0
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-10 67.4 35 88.6
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-10 67.4 35 88.6
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 1.4e-09 66.2 35 82.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 9.4e-09 63.5 39 76.9
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.6e-08 62.8 46 63.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-08 62.0 44 70.5
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-08 61.2 37 78.4
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.0e-07 58.5 27 92.6
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-07 57.4 29 86.2
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 1.5e-06 56.2 35 71.4


User provided reference genes

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