Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36601 Sapria himalayana HOM05D007130 ORTHO05D002078 2.6e-116 422.2 228 100.0
SHI00452 Sapria himalayana HOM05D007130 ORTHO05D002078 3.5e-81 305.4 266 68.8
SHI43343 Sapria himalayana HOM05D007130 ORTHO05D002078 2.5e-74 282.7 235 70.6
SHI15242 Sapria himalayana HOM05D007130 ORTHO05D002078 2.1e-73 279.6 223 73.5
SHI01765 Sapria himalayana HOM05D007130 ORTHO05D002078 1.3e-70 270.4 233 69.1
SHI22413 Sapria himalayana HOM05D007130 ORTHO05D002078 2.2e-67 259.6 225 69.3
SHI37073 Sapria himalayana HOM05D007130 ORTHO05D002078 3.7e-46 189.1 214 55.1
Manes.03G177600 Manihot esculenta HOM05D007130 ORTHO05D002078 3.1e-37 159.5 269 41.6
Potri.008G153800 Populus trichocarpa HOM05D007130 ORTHO05D002078 5.2e-32 142.1 263 39.5
SHI15429 Sapria himalayana HOM05D007130 ORTHO05D002078 1.5e-31 140.6 178 51.7
Sabra10G0056800 Salix brachista HOM05D007130 ORTHO05D002078 1.7e-30 137.1 271 38.0
Sabra08G0117300 Salix brachista HOM05D007130 ORTHO05D002078 3.7e-30 136.0 264 38.3
Manes.15G029700 Manihot esculenta HOM05D007130 ORTHO05D002078 9.2e-29 131.3 264 37.5
Potri.010G086700 Populus trichocarpa HOM05D007130 ORTHO05D002078 1.6e-28 130.6 273 38.8
SHI31593 Sapria himalayana HOM05D000105 ORTHO05D000001 1.5e-26 124.0 133 57.9
Duzib052G0494 Durio zibethinus HOM05D007130 ORTHO05D002078 2.5e-26 123.2 274 36.9
Duzib151G0843 Durio zibethinus HOM05D007130 ORTHO05D002078 1.2e-25 120.9 235 38.7
Gohir.D02G039300 Gossypium hirsutum HOM05D007130 ORTHO05D002078 1.6e-25 120.6 235 38.7
Gorai.005G043500 Gossypium raimondii HOM05D007130 ORTHO05D002078 1.6e-25 120.6 235 38.7
SHI32253 Sapria himalayana HOM05D007130 ORTHO05D002078 2.8e-25 119.8 164 52.4
COL.COLO4_21489 Corchorus olitorius HOM05D007130 ORTHO05D002078 4.7e-25 119.0 235 37.9
Gohir.A02G032600 Gossypium hirsutum HOM05D007130 ORTHO05D002078 4.7e-25 119.0 235 38.3
BraA05t20581Z Brassica rapa HOM05D007130 ORTHO05D002078 1.0e-24 117.9 250 36.8
BcaC08g44270 Brassica carinata HOM05D007130 ORTHO05D002078 1.4e-24 117.5 249 36.9
Gohir.D09G218800 Gossypium hirsutum HOM05D007130 ORTHO05D002078 1.4e-24 117.5 235 37.4
Gohir.A09G216400 Gossypium hirsutum HOM05D007130 ORTHO05D002078 4.0e-24 115.9 270 34.4
Gorai.006G239800 Gossypium raimondii HOM05D007130 ORTHO05D002078 4.0e-24 115.9 235 37.0
Thecc.04G233400 Theobroma cacao HOM05D007130 ORTHO05D002078 1.5e-23 114.0 274 34.7
BcaB02g07856 Brassica carinata HOM05D007130 ORTHO05D002078 2.6e-23 113.2 250 36.0
C06p16890 Brassica napus HOM05D007130 ORTHO05D002078 2.6e-23 113.2 249 35.7
BolC6t36885H Brassica oleracea HOM05D007130 ORTHO05D002078 2.6e-23 113.2 249 35.7
A05p16760 Brassica napus HOM05D007130 ORTHO05D002078 5.8e-23 112.1 248 35.5
Sp7g12990 Schrenkiella parvula HOM05D007130 ORTHO05D002078 5.8e-23 112.1 248 35.5
Carub.0007s2727 Capsella rubella HOM05D007130 ORTHO05D002078 9.8e-23 111.3 258 34.5
AT4G14840 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 8.3e-22 108.2 242 34.7
Dinv44541 Davidia involucrata HOM05D007130 ORTHO05D002078 1.1e-21 107.8 240 36.7
AL7G41010 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 1.4e-21 107.5 242 34.3
SHI31594 Sapria himalayana HOM05D007130 ORTHO05D002078 1.6e-20 104.0 67 82.1
AT3G22520 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 2.7e-20 103.2 240 33.3
AL3G36830 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 4.6e-20 102.4 240 33.3
THA.LOC104808552 Tarenaya hassleriana HOM05D007130 ORTHO05D002078 7.8e-20 101.7 242 33.5
CARHR098410 Cardamine hirsuta HOM05D007130 ORTHO05D002078 3.0e-19 99.8 244 34.0
Thhalv10020335m.g Eutrema salsugineum HOM05D007130 ORTHO05D002078 3.0e-19 99.8 240 34.2
Aa31LG8G9060 Aethionema arabicum HOM05D007130 ORTHO05D002078 8.6e-19 98.2 243 33.3
Sp3g20280 Schrenkiella parvula HOM05D007130 ORTHO05D002078 1.1e-18 97.8 243 34.2
Carub.0003s2268 Capsella rubella HOM05D007130 ORTHO05D002078 2.5e-18 96.7 237 32.1
Cpa.g.sc58.97 Carica papaya HOM05D007130 ORTHO05D002078 3.3e-18 96.3 237 34.2
BcaC09g49178 Brassica carinata HOM05D007130 ORTHO05D002078 9.5e-18 94.7 240 33.3
C01p41760 Brassica napus HOM05D007130 ORTHO05D002078 9.5e-18 94.7 240 33.3
BolC1t04132H Brassica oleracea HOM05D007130 ORTHO05D002078 9.5e-18 94.7 240 33.3
Cfa015660 Carpinus fangiana HOM05D007130 ORTHO05D002078 9.5e-18 94.7 244 32.8
CARHR221400 Cardamine hirsuta HOM05D007130 ORTHO05D002078 1.2e-17 94.4 286 29.7
Aa31LG9G2460 Aethionema arabicum HOM05D007130 ORTHO05D002078 2.8e-17 93.2 243 33.3
BcaB04g20515 Brassica carinata HOM05D007130 ORTHO05D002078 2.8e-17 93.2 243 32.1
A01p32610 Brassica napus HOM05D007130 ORTHO05D002078 2.8e-17 93.2 240 32.5
BraA01t03389Z Brassica rapa HOM05D007130 ORTHO05D002078 2.8e-17 93.2 240 32.5
A03p42790 Brassica napus HOM05D007130 ORTHO05D002078 4.7e-17 92.4 239 31.4
Nitab4.5_0001342g0090 Nicotiana tabacum HOM05D007130 ORTHO05D002078 1.1e-16 91.3 254 30.7
BraA03t13426Z Brassica rapa HOM05D007130 ORTHO05D002078 3.1e-16 89.7 239 31.0
SHI47506 Sapria himalayana HOM05D007130 ORTHO05D002078 3.1e-16 89.7 75 72.0
BcaC05g28042 Brassica carinata HOM05D007130 ORTHO05D002078 1.2e-15 87.8 241 31.5
C05p40640 Brassica napus HOM05D007130 ORTHO05D002078 1.2e-15 87.8 241 31.5
BolC5t32803H Brassica oleracea HOM05D007130 ORTHO05D002078 1.2e-15 87.8 241 31.5
Nitab4.5_0004256g0020 Nicotiana tabacum HOM05D007130 ORTHO05D002078 3.4e-15 86.3 254 30.7
BcaB06g26362 Brassica carinata HOM05D007130 ORTHO05D002078 7.5e-15 85.1 241 31.5
BcaC01g03442 Brassica carinata HOM05D007130 ORTHO05D002078 9.8e-15 84.7 239 30.1
C03p52560 Brassica napus HOM05D007130 ORTHO05D002078 9.8e-15 84.7 239 30.1
Cc03_g03890 Coffea canephora HOM05D007130 ORTHO05D002078 1.3e-14 84.3 249 30.9
Haze_00888 Corylus avellana HOM05D007130 ORTHO05D002078 1.3e-14 84.3 243 30.5
MSTRG.9978 Avicennia marina HOM05D007130 ORTHO05D002078 1.7e-14 84.0 236 29.2
BolC3t17525H Brassica oleracea HOM05D007130 ORTHO05D002078 2.9e-14 83.2 239 30.5
BcaC05g28058 Brassica carinata HOM05D007130 ORTHO05D002078 6.4e-14 82.0 241 29.9
C05p40720 Brassica napus HOM05D007130 ORTHO05D002078 6.4e-14 82.0 241 29.9
BolC5t32817H Brassica oleracea HOM05D007130 ORTHO05D002078 6.4e-14 82.0 241 29.9
A05p26240 Brassica napus HOM05D007130 ORTHO05D002078 8.3e-14 81.6 242 30.6
BraA05t21500Z Brassica rapa HOM05D007130 ORTHO05D002078 8.3e-14 81.6 242 31.8
Solyc09g082130.4 Solanum lycopersicum HOM05D007130 ORTHO05D002078 8.3e-14 81.6 253 29.6
Glyma.10G127200 Glycine max HOM05D007130 ORTHO05D002078 1.4e-13 80.9 237 28.7
Lalb_Chr09g0319881 Lupinus albus HOM05D007130 ORTHO05D002078 1.4e-13 80.9 240 29.6
Sopen09g031010 Solanum pennellii HOM05D007130 ORTHO05D002078 1.4e-13 80.9 253 29.6
Glyma.20G078300 Glycine max HOM05D007130 ORTHO05D002078 7.1e-13 78.6 243 28.4
CAN.G1094.6 Capsicum annuum HOM05D007130 ORTHO05D002078 6.0e-12 75.5 240 29.6
VMungo0720G1198 Vigna mungo HOM05D007130 ORTHO05D002078 1.3e-11 74.3 267 27.3
Phvul.007G237900 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 3.0e-11 73.2 269 27.5
Aa31sc50G40 Aethionema arabicum HOM05D007130 ORTHO05D002078 1.1e-10 71.2 195 31.8
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 1.1e-10 71.2 152 36.2
Peaxi162Scf00092g00720 Petunia axillaris HOM05D007130 ORTHO05D002078 2.5e-10 70.1 251 27.5
Phvul.010G080100 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 1.2e-09 67.8 242 28.1
VMungo0331G0902 Vigna mungo HOM05D007130 ORTHO05D002078 1.4e-08 64.3 244 29.1
Glyma.01G137900 Glycine max HOM05D007130 ORTHO05D002078 2.0e-07 60.5 264 27.3
Glyma.01G138200 Glycine max HOM05D007130 ORTHO05D002078 2.0e-07 60.5 264 27.3
SGA_v2.0_scaffold39G15213 Striga asiatica HOM05D007130 ORTHO05D002078 5.8e-07 58.9 238 25.2
Ciclev10005290m.g Citrus clementina HOM05D007130 ORTHO05D002078 2.9e-06 56.6 183 29.0
SHI15023 Sapria himalayana HOM05D007130 ORTHO05D002078 2.9e-06 56.6 37 75.7
Cpa.g.sc79.63 Carica papaya HOM05D007130 ORTHO05D002078 3.7e-06 56.2 134 34.3


User provided reference genes

Program Settings