Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-164 583.2 287 100.0
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-79 299.7 207 76.3
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-78 297.4 213 74.2
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 6.2e-75 285.0 306 54.9
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-64 250.4 342 46.5
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-64 249.2 334 47.6
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-57 227.6 309 48.5
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-57 227.3 198 65.7
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-56 224.2 342 43.0
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-54 216.9 240 54.6
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-53 214.2 198 62.1
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-53 214.2 311 46.3
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-53 213.8 299 47.5
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-53 213.4 227 56.4
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 8.8e-53 211.5 308 46.1
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-51 207.6 320 42.8
SHI34995 Sapria himalayana HOM05D001560 ORTHO05D010994 3.7e-51 206.1 116 87.9
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.4e-50 204.1 233 55.4
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-50 203.4 281 48.4
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 5.3e-50 202.2 284 47.5
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 9.1e-50 201.4 312 44.2
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-48 196.8 233 52.4
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-47 193.4 152 68.4
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-45 188.0 328 39.9
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-45 188.0 328 39.9
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-43 180.6 281 44.1
SHI35452 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-42 176.8 148 64.2
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-42 176.4 257 45.1
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 5.0e-40 169.1 96 87.5
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 6.5e-40 168.7 240 45.8
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 6.5e-40 168.7 124 71.8
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 1.9e-39 167.2 96 86.5
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 3.2e-39 166.4 98 83.7
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 3.2e-39 166.4 96 85.4
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 5.5e-39 165.6 140 62.9
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 7.2e-39 165.2 96 85.4
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 1.2e-38 164.5 104 76.9
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 1.2e-38 164.5 104 76.9
BraSC77t46636Z Brassica rapa HOM05D001560 ORTHO05D003613 1.2e-38 164.5 104 76.9
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 1.2e-38 164.5 104 76.9
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 2.1e-38 163.7 98 83.7
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 2.1e-38 163.7 98 83.7
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 3.6e-38 162.9 97 85.6
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 3.6e-38 162.9 97 85.6
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 3.6e-38 162.9 96 84.4
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 3.6e-38 162.9 97 85.6
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 4.7e-38 162.5 113 74.3
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 6.1e-38 162.2 96 83.3
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 6.1e-38 162.2 274 41.6
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 1.0e-37 161.4 104 76.0
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 1.0e-37 161.4 104 76.0
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.0e-37 161.4 104 76.0
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 1.0e-37 161.4 104 76.0
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.0e-37 161.4 98 82.7
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.4e-37 161.0 96 84.4
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.3e-37 160.2 96 84.4
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 2.3e-37 160.2 96 84.4
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.3e-37 160.2 96 82.3
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.3e-37 160.2 96 82.3
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.3e-37 160.2 96 82.3
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 2.3e-37 160.2 96 84.4
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 4.0e-37 159.5 121 73.6
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 4.0e-37 159.5 96 83.3
Ah.01g011760 Amaranthus hybridus HOM05D001560 ORTHO05D003613 5.2e-37 159.1 116 72.4
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 6.8e-37 158.7 96 83.3
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 6.8e-37 158.7 96 83.3
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 6.8e-37 158.7 96 83.3
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 6.8e-37 158.7 96 83.3
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 6.8e-37 158.7 96 81.2
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-36 157.5 125 67.2
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 5.7e-36 155.6 158 58.2
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 5.7e-36 155.6 96 82.3
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 9.7e-36 154.8 105 75.2
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 9.7e-36 154.8 105 75.2
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.3e-35 154.5 96 82.3
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-35 154.1 122 68.9
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 2.2e-35 153.7 96 82.3
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 2.2e-35 153.7 96 82.3
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 2.8e-35 153.3 96 81.2
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-35 152.9 293 38.9
ECA246G4254 Erigeron canadensis HOM05D001560 ORTHO05D003613 1.8e-34 150.6 195 49.2
SHI36937 Sapria himalayana HOM05D008793 ORTHO05D012151 1.8e-34 150.6 86 88.4
SHI15040 Sapria himalayana HOM05D000743 ORTHO05D003613 5.3e-34 149.1 154 53.9
Oeu031732.1 Olea europaea HOM05D001560 ORTHO05D003613 9.1e-34 148.3 116 68.1
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 3.5e-33 146.4 96 76.0
SHI38215 Sapria himalayana HOM05D000743 ORTHO05D000580 1.0e-32 144.8 76 92.1
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 3.2e-31 139.8 153 54.9
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 7.2e-31 138.7 117 65.0
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 1.2e-30 137.9 250 41.6
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 1.2e-30 137.9 250 41.6
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-30 137.9 76 86.8
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-30 137.1 74 89.2
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 3.6e-30 136.3 135 57.8
SHI38100 Sapria himalayana HOM05D008793 ORTHO05D012151 1.4e-26 124.4 68 88.2
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 5.9e-25 119.0 204 41.7
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-24 116.7 239 39.7
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-23 112.8 100 64.0
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 8.0e-22 108.6 167 43.1
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.8e-21 107.5 94 60.6
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 6.8e-21 105.5 96 60.4
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 8.3e-19 98.6 61 80.3
CsaV3_UNG210430 Cucumis sativus L. HOM05D001560 ORTHO05D003613 2.7e-17 93.6 65 73.8
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 5.9e-17 92.4 120 46.7
CsaV3_1G026590 Cucumis sativus L. HOM05D001560 ORTHO05D003613 2.3e-16 90.5 62 74.2
SHI46362 Sapria himalayana HOM05D008793 ORTHO05D012151 2.3e-16 90.5 47 91.5
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 3.9e-16 89.7 54 77.8
TPR.G13006 Trifolium pratense HOM05D000569 ORTHO05D000418 6.6e-16 89.0 68 66.2
SHI49909 Sapria himalayana HOM05D008793 ORTHO05D012151 2.5e-15 87.0 46 89.1
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 4.7e-14 82.8 50 84.0
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 1.8e-13 80.9 43 86.0
Ca_14832_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.3e-13 80.5 51 80.4
Ca_22164_v3 Cicer arietinum L. HOM05D001560 ORTHO05D010874 2.3e-13 80.5 51 80.4
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 3.1e-13 80.1 52 76.9
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 3.1e-13 80.1 52 76.9
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 3.1e-13 80.1 52 76.9
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 3.1e-13 80.1 50 82.0
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 3.1e-13 80.1 50 82.0
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 3.1e-13 80.1 50 82.0
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 3.1e-13 80.1 50 82.0
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 3.1e-13 80.1 51 80.4
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 8.9e-13 78.6 41 87.8
SHI46273 Sapria himalayana HOM05D008793 ORTHO05D012151 8.9e-13 78.6 41 87.8
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 1.5e-12 77.8 50 80.0
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-12 77.8 40 90.0
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 3.4e-12 76.6 62 67.7
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.8e-12 75.9 50 74.0
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 7.5e-12 75.5 50 78.0
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 7.5e-12 75.5 73 57.5
Medtr4g057110 Medicago truncatula HOM05D001560 ORTHO05D003613 2.9e-11 73.6 58 72.4
MBI11_g09046_MAGBIO Magnolia biondii HOM05D008793 ORTHO05D012151 3.7e-11 73.2 50 76.0
SHI39754 Sapria himalayana HOM05D001560 ORTHO05D012151 6.4e-11 72.4 75 57.3
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 1.4e-10 71.2 41 82.9
SHI39990 Sapria himalayana HOM05D001560 ORTHO05D010994 1.9e-10 70.9 174 33.9
Peaxi162Scf00122g00065 Petunia axillaris HOM05D001560 ORTHO05D003613 3.2e-10 70.1 41 82.9
Nitab4.5_0000280g0180 Nicotiana tabacum HOM05D008793 ORTHO05D012151 5.4e-10 69.3 45 75.6
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 7.0e-10 68.9 50 72.0
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 1.2e-09 68.2 66 56.1
Solyc09g056080.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.6e-09 67.8 40 80.0
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-09 67.4 67 56.7
SHI36572 Sapria himalayana HOM05D001560 ORTHO05D010994 3.5e-09 66.6 35 91.4
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 1.3e-08 64.7 37 86.5
Solyc09g057830.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.0e-08 62.8 40 72.5
unitig_87.g27958 Utricularia gibba HOM05D008793 ORTHO05D012151 1.1e-07 61.6 35 88.6
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.5e-07 61.2 170 33.5
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 1.9e-07 60.8 46 71.7
Nitab4.5_0000172g0590 Nicotiana tabacum HOM05D008793 ORTHO05D012151 3.3e-07 60.1 50 64.0
Nitab4.5_0002739g0100 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.2e-06 55.8 30 83.3
SHI35001 Sapria himalayana HOM05D001560 ORTHO05D010994 6.2e-06 55.8 32 87.5
TPR.G33726 Trifolium pratense HOM05D001560 ORTHO05D003613 6.2e-06 55.8 31 77.4


User provided reference genes

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