Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 8.4e-54 213.4 104 100.0
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 1.8e-40 169.1 104 80.8
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.8e-40 169.1 104 80.8
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 2.4e-37 158.7 86 90.7
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 2.5e-34 148.7 104 74.0
EL10As15g24132 Beta vulgaris HOM05D008259 ORTHO05D010449 4.8e-33 144.4 104 73.1
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 6.9e-32 140.6 92 77.2
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.9e-29 132.5 90 74.4
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 1.1e-24 116.7 70 82.9
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 6.9e-24 114.0 70 81.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 7.6e-23 110.5 88 67.0
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 7.6e-23 110.5 97 61.9
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 7.6e-23 110.5 88 67.0
arahy.Tifrunner.gnm1.ann1.2N2B18 Arachis hypogaea HOM05D008259 ORTHO05D010449 1.7e-22 109.4 84 71.4
arahy.Tifrunner.gnm1.ann1.1MX66Y Arachis hypogaea HOM05D008259 ORTHO05D010449 3.2e-21 105.1 52 98.1
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 7.2e-21 104.0 51 94.1
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 2.1e-20 102.4 51 92.2
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 2.1e-20 102.4 54 88.9
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.1e-20 102.4 51 92.2
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 7.9e-20 100.5 47 95.7
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 7.9e-20 100.5 47 95.7
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 7.9e-20 100.5 47 95.7
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 7.9e-20 100.5 47 95.7
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.8e-19 99.4 54 87.0
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 2.3e-19 99.0 51 88.2
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 3.9e-19 98.2 54 87.0
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.9e-19 98.2 51 90.2
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 5.1e-19 97.8 51 90.2
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 5.1e-19 97.8 47 93.6
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 6.7e-19 97.4 47 93.6
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 6.7e-19 97.4 51 86.3
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 1.5e-18 96.3 51 88.2
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.3e-18 95.1 51 88.2
arahy.Tifrunner.gnm1.ann1.L1GII0 Arachis hypogaea HOM05D008259 ORTHO05D010449 4.3e-18 94.7 47 95.7
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 5.7e-18 94.4 51 86.3
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 7.4e-18 94.0 51 86.3
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.3e-17 93.2 51 86.3
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 2.2e-17 92.4 54 79.6
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 2.8e-17 92.0 50 84.0
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 4.8e-17 91.3 76 65.8
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 6.3e-17 90.9 44 100.0
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.1e-16 88.2 51 80.4
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 4.1e-16 88.2 46 89.1
arahy.Tifrunner.gnm1.ann1.K9UDI5 Arachis hypogaea HOM05D008259 ORTHO05D010449 9.0e-16 87.0 46 93.5
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 2.0e-15 85.9 51 78.4
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 5.9e-15 84.3 51 80.4
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.3e-14 83.2 53 77.4
Phvul.007G166000 Phaseolus vulgaris HOM05D008259 ORTHO05D010449 1.7e-14 82.8 41 95.1
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.2e-14 82.4 41 87.8
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 3.8e-14 81.6 54 72.2
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 3.8e-14 81.6 41 87.8
Atru.chr1.3411 Acer truncatum HOM05D008259 ORTHO05D007321 5.0e-14 81.3 38 97.4
Cpa.g.c43052.1 Carica papaya HOM05D004182 ORTHO05D007321 1.1e-13 80.1 37 100.0
Nn029s41584 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-13 80.1 37 100.0
Nn212s45203 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-13 80.1 37 100.0
Nn264s45947 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-13 80.1 37 100.0
Nn304s46229 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-13 80.1 37 100.0
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.1e-13 80.1 48 83.3
PGSC0003DMG400027964 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.1e-13 80.1 37 100.0
PGSC0003DMG400027965 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.1e-13 80.1 37 100.0
PGSC0003DMG400041917 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.1e-13 80.1 37 100.0
arahy.Tifrunner.gnm1.ann1.CT1WFL Arachis hypogaea HOM05D008259 ORTHO05D010449 3.2e-13 78.6 40 90.0
arahy.Tifrunner.gnm1.ann1.F9I1DV Arachis hypogaea HOM05D008259 ORTHO05D010449 3.2e-13 78.6 38 94.7
Sc21g0003840 Simmondsia chinensis HOM05D004182 ORTHO05D007321 7.2e-13 77.4 37 97.3
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 6.1e-12 74.3 41 75.6
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 6.1e-12 74.3 41 75.6
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.3e-11 72.4 45 80.0
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 6.7e-11 70.9 43 76.7
SHI23682 Sapria himalayana HOM05D001966 ORTHO05D010449 1.5e-10 69.7 57 59.6
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 7.4e-10 67.4 39 76.9
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.7e-09 66.2 38 76.3
Nn064s42221 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.7e-09 66.2 40 82.5
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 8.2e-09 63.9 33 84.8
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 8.2e-09 63.9 33 90.9
EL10Ac8g19701 Beta vulgaris HOM05D004182 ORTHO05D007321 1.1e-08 63.5 30 96.7
Phvul.010G035850 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 1.4e-08 63.2 30 93.3
BraSC58t46454Z Brassica rapa HOM05D001966 ORTHO05D010449 2.4e-08 62.4 35 77.1
AT2G07706 Arabidopsis thaliana HOM05D020812 ORTHO05D023689 3.1e-08 62.0 98 43.9
EL10Ac7g17372 Beta vulgaris HOM05D004182 ORTHO05D007321 3.1e-08 62.0 29 96.6
CARHR282850 Cardamine hirsuta HOM05D020812 ORTHO05D020154 3.1e-08 62.0 98 43.9
Glyma.03G084500 Glycine max HOM05D004182 ORTHO05D007321 3.1e-08 62.0 29 96.6
Glyma.09G164000 Glycine max HOM05D004182 ORTHO05D007321 3.1e-08 62.0 29 96.6
Gohir.1Z049982 Gossypium hirsutum HOM05D004182 ORTHO05D007321 3.1e-08 62.0 29 96.6
Gohir.A04G039255 Gossypium hirsutum HOM05D004182 ORTHO05D007321 3.1e-08 62.0 29 96.6
Hma1.2p1_0594F.1_g185812 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 3.1e-08 62.0 29 96.6
arahy.Tifrunner.gnm1.ann1.YI1HYY Arachis hypogaea HOM05D008259 ORTHO05D010449 5.3e-08 61.2 28 100.0
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 6.9e-08 60.8 30 93.3
PGSC0003DMG400043035 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.5e-07 59.7 29 89.7
DCAR_029424 Daucus carota HOM05D001966 ORTHO05D010449 5.9e-07 57.8 38 65.8
SGA_v2.0_scaffold2G00881 Striga asiatica HOM05D014326 ORTHO05D016449 1.7e-06 56.2 42 64.3


User provided reference genes

Program Settings