Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36445 Sapria himalayana HOM05D001607 ORTHO05D001893 7.0e-33 143.3 68 100.0
SHI36438 Sapria himalayana HOM05D001607 ORTHO05D001893 1.3e-15 85.9 53 83.0
SHI32637 Sapria himalayana HOM05D001607 ORTHO05D001893 2.7e-13 78.2 54 75.9
SHI51833 Sapria himalayana HOM05D001607 ORTHO05D001893 3.6e-13 77.8 55 69.1
SHI52599 Sapria himalayana HOM05D001607 ORTHO05D001893 3.6e-13 77.8 54 70.4
SHI54036 Sapria himalayana HOM05D001607 ORTHO05D001893 3.6e-13 77.8 55 69.1
SHI54338 Sapria himalayana HOM05D001607 ORTHO05D001893 3.6e-13 77.8 54 70.4
SHI34712 Sapria himalayana HOM05D001607 ORTHO05D001893 6.1e-13 77.0 51 70.6
SHI35317 Sapria himalayana HOM05D001607 ORTHO05D001893 6.1e-13 77.0 55 69.1
SHI17500 Sapria himalayana HOM05D001607 ORTHO05D001893 8.0e-13 76.6 55 72.7
SHI51516 Sapria himalayana HOM05D001607 ORTHO05D001893 8.0e-13 76.6 55 69.1
SHI51593 Sapria himalayana HOM05D001607 ORTHO05D001893 8.0e-13 76.6 55 69.1
SHI53940 Sapria himalayana HOM05D001607 ORTHO05D001893 8.0e-13 76.6 55 67.3
SHI51849 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-12 75.9 55 65.5
SHI34334 Sapria himalayana HOM05D001607 ORTHO05D001893 2.3e-12 75.1 59 61.0
SHI51146 Sapria himalayana HOM05D001607 ORTHO05D001893 2.3e-12 75.1 55 65.5
SHI39067 Sapria himalayana HOM05D001607 ORTHO05D001893 4.0e-12 74.3 55 67.3
SHI51071 Sapria himalayana HOM05D001607 ORTHO05D001893 4.0e-12 74.3 55 69.1
SHI39949 Sapria himalayana HOM05D001607 ORTHO05D001893 5.2e-12 73.9 55 67.3
SHI51445 Sapria himalayana HOM05D001607 ORTHO05D001893 5.2e-12 73.9 52 67.3
SHI51806 Sapria himalayana HOM05D001607 ORTHO05D001893 5.2e-12 73.9 53 66.0
SHI53902 Sapria himalayana HOM05D001607 ORTHO05D001893 5.2e-12 73.9 53 66.0
SHI39142 Sapria himalayana HOM05D001607 ORTHO05D001893 6.8e-12 73.6 50 68.0
SHI50829 Sapria himalayana HOM05D001607 ORTHO05D001893 6.8e-12 73.6 55 65.5
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 8.8e-12 73.2 56 62.5
SHI51408 Sapria himalayana HOM05D001607 ORTHO05D001893 8.8e-12 73.2 55 63.6
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 1.2e-11 72.8 50 68.0
SHI12510 Sapria himalayana HOM05D001607 ORTHO05D001893 1.5e-11 72.4 51 70.6
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 2.0e-11 72.0 50 70.0
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 2.0e-11 72.0 50 68.0
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 2.0e-11 72.0 50 70.0
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 2.0e-11 72.0 50 70.0
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 2.6e-11 71.6 50 68.0
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 2.6e-11 71.6 50 68.0
SHI07622 Sapria himalayana HOM05D001607 ORTHO05D001893 2.6e-11 71.6 55 65.5
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 3.4e-11 71.2 50 66.0
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 3.4e-11 71.2 50 68.0
SHI17279 Sapria himalayana HOM05D001607 ORTHO05D001893 3.4e-11 71.2 53 66.0
CSS0006239 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 4.4e-11 70.9 57 59.6
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 4.4e-11 70.9 50 68.0
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 4.4e-11 70.9 50 68.0
SHI51913 Sapria himalayana HOM05D001607 ORTHO05D001893 5.7e-11 70.5 55 65.5
SHI52078 Sapria himalayana HOM05D001607 ORTHO05D001893 5.7e-11 70.5 55 65.5
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 7.5e-11 70.1 50 68.0
Ca_05502_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 7.5e-11 70.1 50 68.0
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 7.5e-11 70.1 50 68.0
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 7.5e-11 70.1 50 64.0
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 7.5e-11 70.1 50 64.0
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 9.8e-11 69.7 56 58.9
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 66.0
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 66.0
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 66.0
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 68.0
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 64.0
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 66.0
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 66.0
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 66.0
SHI17153 Sapria himalayana HOM05D001607 ORTHO05D001893 9.8e-11 69.7 49 69.4
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 66.0
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 9.8e-11 69.7 50 66.0
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 1.3e-10 69.3 50 68.0
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 1.3e-10 69.3 50 66.0
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 1.7e-10 68.9 50 64.0
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 1.7e-10 68.9 50 64.0
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 1.7e-10 68.9 50 64.0
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.7e-10 68.9 50 66.0
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 66.0
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 64.0
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 68.0
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 68.0
Gohir.D08G110716 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 68.0
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 68.0
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 68.0
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 68.0
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 66.0
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 68.0
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 2.2e-10 68.6 50 62.0
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.8e-10 68.2 50 64.0
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.8e-10 68.2 50 64.0
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 2.8e-10 68.2 50 64.0
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 2.8e-10 68.2 50 64.0
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 2.8e-10 68.2 50 64.0
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 64.0
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 64.0
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 64.0
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 64.0
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 64.0
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 62.0
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 66.0
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 62.0
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 62.0
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 3.7e-10 67.8 50 64.0
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 4.8e-10 67.4 50 64.0
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 4.8e-10 67.4 50 64.0
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 4.8e-10 67.4 50 66.0
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 4.8e-10 67.4 50 64.0
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 4.8e-10 67.4 50 64.0
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 6.3e-10 67.0 50 62.0
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 6.3e-10 67.0 50 66.0
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 6.3e-10 67.0 50 62.0
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 6.3e-10 67.0 50 64.0
SHI51682 Sapria himalayana HOM05D001607 ORTHO05D001893 6.3e-10 67.0 55 58.2
Zm00001eb111040 Zea mays HOM05D000323 ORTHO05D000201 6.3e-10 67.0 50 64.0
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 62.0
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 64.0
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 64.0
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 64.0
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 66.0
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 64.0
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 60.0
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 64.0
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 8.3e-10 66.6 50 64.0
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 62.0
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 64.0
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 64.0
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 62.0
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 62.0
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 62.0
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 64.0
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 64.0
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 62.0
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 62.0
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 62.0
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 1.1e-09 66.2 50 62.0
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 1.4e-09 65.9 50 60.0
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 1.4e-09 65.9 50 60.0
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 1.4e-09 65.9 50 60.0
SHI39452 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-09 65.9 55 54.5
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 1.8e-09 65.5 50 62.0
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 1.8e-09 65.5 50 62.0
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 1.8e-09 65.5 50 62.0
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 1.8e-09 65.5 50 62.0
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 1.8e-09 65.5 50 62.0
SHI49655 Sapria himalayana HOM05D001607 ORTHO05D001893 1.8e-09 65.5 53 60.4
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 1.8e-09 65.5 50 62.0
SEGI_31249 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 1.8e-09 65.5 50 60.0
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 2.4e-09 65.1 50 60.0
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.4e-09 65.1 50 62.0
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 2.4e-09 65.1 50 60.0
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 2.4e-09 65.1 50 64.0
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 5.4e-09 63.9 50 60.0
SHI42704 Sapria himalayana HOM05D001607 ORTHO05D001893 5.4e-09 63.9 56 57.1
SHI53316 Sapria himalayana HOM05D001607 ORTHO05D001893 5.4e-09 63.9 44 70.5
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 7.0e-09 63.5 50 60.0
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 9.1e-09 63.2 50 60.0
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 1.6e-08 62.4 50 60.0
BcaNung04146 Brassica carinata HOM05D001607 ORTHO05D001893 1.6e-08 62.4 50 60.0
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 1.6e-08 62.4 50 60.0
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 1.6e-08 62.4 50 60.0
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 1.6e-08 62.4 50 60.0
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 1.6e-08 62.4 50 60.0
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 1.6e-08 62.4 50 60.0
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 1.6e-08 62.4 50 58.0
SHI43310 Sapria himalayana HOM05D001607 ORTHO05D001893 1.6e-08 62.4 57 54.4
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 2.0e-08 62.0 50 60.0
SHI35771 Sapria himalayana HOM05D001607 ORTHO05D001893 2.0e-08 62.0 51 62.7
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 3.5e-08 61.2 50 60.0
SHI51594 Sapria himalayana HOM05D001607 ORTHO05D001893 3.5e-08 61.2 45 64.4
SHI50611 Sapria himalayana HOM05D001607 ORTHO05D001893 4.5e-08 60.8 56 53.6
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 4.5e-08 60.8 50 60.0
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 7.7e-08 60.1 50 56.0
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 1.0e-07 59.7 50 56.0
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.0e-07 59.7 50 60.0
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 1.3e-07 59.3 50 56.0
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 1.3e-07 59.3 50 54.0
SHI29677 Sapria himalayana HOM05D001607 ORTHO05D001893 1.3e-07 59.3 55 56.4
SHI29960 Sapria himalayana HOM05D001607 ORTHO05D001893 1.3e-07 59.3 55 50.9
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 1.3e-07 59.3 50 54.0
SHI12514 Sapria himalayana HOM05D001607 ORTHO05D001893 2.3e-07 58.5 38 76.3
SHI51073 Sapria himalayana HOM05D001607 ORTHO05D001893 2.9e-07 58.2 42 61.9
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 6.6e-07 57.0 50 54.0
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 8.6e-07 56.6 43 62.8
SHI39897 Sapria himalayana HOM05D001607 ORTHO05D001893 8.6e-07 56.6 35 77.1
SHI51265 Sapria himalayana HOM05D001607 ORTHO05D001893 8.6e-07 56.6 35 77.1
SHI51393 Sapria himalayana HOM05D001607 ORTHO05D001893 8.6e-07 56.6 35 77.1
SHI10633 Sapria himalayana HOM05D012978 ORTHO05D366999 5.5e-06 53.9 40 67.5
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 5.5e-06 53.9 38 71.1
SHI32023 Sapria himalayana HOM05D001607 ORTHO05D001893 7.2e-06 53.5 51 54.9
SHI28638 Sapria himalayana HOM05D001607 ORTHO05D001893 9.5e-06 53.1 41 65.9


User provided reference genes

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