Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36370 Sapria himalayana HOM05D006320 ORTHO05D007069 7.4e-37 156.8 83 100.0
SHI47782 Sapria himalayana HOM05D006320 ORTHO05D007069 7.0e-27 123.6 83 83.1
SHI47632 Sapria himalayana HOM05D006320 ORTHO05D007069 1.2e-26 122.9 83 83.1
SHI51203 Sapria himalayana HOM05D006320 ORTHO05D007069 1.2e-26 122.9 83 83.1
SHI34993 Sapria himalayana HOM05D006320 ORTHO05D007069 1.6e-26 122.5 86 82.6
SHI39778 Sapria himalayana HOM05D006320 ORTHO05D007069 1.7e-25 119.0 84 82.1
SHI50287 Sapria himalayana HOM05D006320 ORTHO05D007069 5.7e-21 104.0 72 77.8
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 3.1e-19 98.2 61 86.9
SHI46272 Sapria himalayana HOM05D000743 ORTHO05D000580 4.1e-19 97.8 61 88.5
SHI36586 Sapria himalayana HOM05D000743 ORTHO05D000580 5.3e-19 97.4 61 88.5
SHI40315 Sapria himalayana HOM05D006320 ORTHO05D007069 5.3e-19 97.4 61 88.5
SGA_v2.0_scaffold255G45504 Striga asiatica HOM05D006320 ORTHO05D007069 7.0e-19 97.1 74 77.0
SalBow1G1899 Salvia bowleyana HOM05D006320 ORTHO05D007069 1.2e-18 96.3 61 88.5
SHI36772 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-18 95.9 61 88.5
SHI36783 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-18 95.9 61 88.5
SHI49633 Sapria himalayana HOM05D006320 ORTHO05D007069 1.6e-18 95.9 61 86.9
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 2.7e-18 95.1 60 86.7
SHI37138 Sapria himalayana HOM05D006320 ORTHO05D007069 2.7e-18 95.1 61 86.9
SHI52535 Sapria himalayana HOM05D006320 ORTHO05D007069 4.5e-18 94.4 61 86.9
LjContig00439g0017906 Lotus japonicus HOM05D006320 ORTHO05D007069 5.9e-18 94.0 61 86.9
LjContig00446g0026709 Lotus japonicus HOM05D006320 ORTHO05D007069 5.9e-18 94.0 61 86.9
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-18 94.0 60 86.7
Sed0021840 Sechium edule HOM05D006320 ORTHO05D007069 5.9e-18 94.0 61 86.9
SHI15099 Sapria himalayana HOM05D006320 ORTHO05D007069 7.7e-18 93.6 58 89.7
SHI35481 Sapria himalayana HOM05D000890 ORTHO05D007069 7.7e-18 93.6 58 89.7
Aqoxy12s033 Aquilegia oxysepala HOM05D006320 ORTHO05D007069 1.7e-17 92.4 61 83.6
AUR62042330 Chenopodium quinoa HOM05D006320 ORTHO05D007069 1.7e-17 92.4 61 83.6
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-17 92.4 61 85.2
Hma1.2p1_1191F.1_g265490 Hydrangea macrophylla HOM05D006320 ORTHO05D007069 2.9e-17 91.7 60 85.0
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 3.8e-17 91.3 61 83.6
SHI39753 Sapria himalayana HOM05D006320 ORTHO05D007069 3.8e-17 91.3 58 87.9
CARHR287930 Cardamine hirsuta HOM05D006320 ORTHO05D007069 5.0e-17 90.9 61 85.2
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 5.0e-17 90.9 61 85.2
SHI34625 Sapria himalayana HOM05D000743 ORTHO05D000580 5.0e-17 90.9 61 83.6
AL5G20340 Arabidopsis lyrata HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
AT2G07671 Arabidopsis thaliana HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
ATMG01080 Arabidopsis thaliana HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
arahy.Tifrunner.gnm1.ann1.5U23EP Arachis hypogaea HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
arahy.Tifrunner.gnm1.ann1.XSHW5Z Arachis hypogaea HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
arahy.Tifrunner.gnm1.ann1.YTYD5C Arachis hypogaea HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
BolSC28t60384H Brassica oleracea HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
BolSC28t60392H Brassica oleracea HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
BolSC28t60418H Brassica oleracea HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
BraSC224t45817Z Brassica rapa HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
CANSAT16G0023 Cannabis sativa HOM05D006320 ORTHO05D007069 6.5e-17 90.5 60 83.3
Thhalv10023008m.g Eutrema salsugineum HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
Lalb_Chr00c24g0406831 Lupinus albus HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
Lalb_Chr11g0070071 Lupinus albus HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
Phvul.005G088454 Phaseolus vulgaris HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
RcHm_v2.0_MTg0498361 Rosa chinensis HOM05D006320 ORTHO05D007069 6.5e-17 90.5 61 83.6
SHI39988 Sapria himalayana HOM05D006320 ORTHO05D007069 6.5e-17 90.5 58 86.2
SHI54307 Sapria himalayana HOM05D006320 ORTHO05D007069 6.5e-17 90.5 58 86.2
CsaV3_UNG209120 Cucumis sativus L. HOM05D006320 ORTHO05D007069 1.1e-16 89.7 61 83.6
PGR028G0009 Punica granatum HOM05D006320 ORTHO05D007069 1.1e-16 89.7 61 83.6
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-16 89.7 58 84.5
SHI38101 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-16 89.7 59 83.1
Ah.10g028420 Amaranthus hybridus HOM05D006320 ORTHO05D007069 1.5e-16 89.4 61 83.6
C01p34830 Brassica napus HOM05D006320 ORTHO05D007069 1.5e-16 89.4 61 82.0
Gohir.D07G024400 Gossypium hirsutum HOM05D006320 ORTHO05D007069 1.5e-16 89.4 60 83.3
RhsimMtG0004200 Rhododendron simsii HOM05D006320 ORTHO05D007069 1.5e-16 89.4 60 83.3
SHI36936 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-16 89.4 61 82.0
C01p34910 Brassica napus HOM05D006320 ORTHO05D007069 1.9e-16 89.0 61 82.0
BolC1t03457H Brassica oleracea HOM05D006320 ORTHO05D007069 1.9e-16 89.0 61 82.0
SHI35484 Sapria himalayana HOM05D006320 ORTHO05D007069 1.9e-16 89.0 58 86.2
SHI38846 Sapria himalayana HOM05D006320 ORTHO05D007069 1.9e-16 89.0 58 82.8
SHI35237 Sapria himalayana HOM05D006320 ORTHO05D007069 2.5e-16 88.6 58 84.5
SHI46360 Sapria himalayana HOM05D006320 ORTHO05D007069 2.5e-16 88.6 58 84.5
SHI48649 Sapria himalayana HOM05D006320 ORTHO05D007069 2.5e-16 88.6 58 84.5
SHI38465 Sapria himalayana HOM05D000743 ORTHO05D000580 3.2e-16 88.2 56 85.7
Hund27557 Selenicereus undatus HOM05D001750 ORTHO05D007069 3.2e-16 88.2 61 82.0
SalBow8G4348 Salvia bowleyana HOM05D006320 ORTHO05D007069 4.2e-16 87.8 61 82.0
SHI27343 Sapria himalayana HOM05D006320 ORTHO05D007069 5.5e-16 87.4 57 84.2
ECA041G0001 Erigeron canadensis HOM05D001750 ORTHO05D001825 7.2e-16 87.0 60 81.7
ECA234G4202 Erigeron canadensis HOM05D006320 ORTHO05D007069 7.2e-16 87.0 60 81.7
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 7.2e-16 87.0 60 81.7
Lsat_1_v5_gn_8_111781 Lactuca sativa HOM05D006320 ORTHO05D007069 7.2e-16 87.0 60 81.7
Psat1g120760 Pisum sativum HOM05D012609 ORTHO05D007069 7.2e-16 87.0 61 82.0
SHI53429 Sapria himalayana HOM05D006320 ORTHO05D007069 7.2e-16 87.0 58 84.5
Phvul.011G124000 Phaseolus vulgaris HOM05D006320 ORTHO05D007069 9.4e-16 86.7 61 80.3
Sc08g0004920 Simmondsia chinensis HOM05D006320 ORTHO05D007069 9.4e-16 86.7 61 78.7
SHI53047 Sapria himalayana HOM05D006320 ORTHO05D007069 1.2e-15 86.3 58 82.8
CDE02G4101 Ceratophyllum demersum HOM05D006320 ORTHO05D007069 1.6e-15 85.9 60 81.7
SHI37168 Sapria himalayana HOM05D006320 ORTHO05D007069 1.6e-15 85.9 61 82.0
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 2.7e-15 85.1 60 81.7
Dinv06715 Davidia involucrata HOM05D006320 ORTHO05D007069 2.7e-15 85.1 60 81.7
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 2.7e-15 85.1 60 81.7
Nitab4.5_0002326g0030 Nicotiana tabacum HOM05D006320 ORTHO05D007069 2.7e-15 85.1 65 73.8
SalBow6G3944 Salvia bowleyana HOM05D006320 ORTHO05D007069 2.7e-15 85.1 61 78.7
SHI37852 Sapria himalayana HOM05D006320 ORTHO05D007069 2.7e-15 85.1 61 80.3
GSVIVG01029662001 Vitis vinifera HOM05D006320 ORTHO05D007069 3.6e-15 84.7 60 78.3
Lalb_Chr10g0093911 Lupinus albus HOM05D006320 ORTHO05D007069 4.7e-15 84.3 61 78.7
Aa31sc483G20 Aethionema arabicum HOM05D006320 ORTHO05D007069 6.1e-15 84.0 61 82.0
SHI42051 Sapria himalayana HOM05D006320 ORTHO05D007069 8.0e-15 83.6 58 81.0
SHI50161 Sapria himalayana HOM05D006320 ORTHO05D007069 8.0e-15 83.6 58 81.0
Nitab4.5_0000172g0580 Nicotiana tabacum HOM05D006320 ORTHO05D007069 1.4e-14 82.8 60 76.7
SHI41242 Sapria himalayana HOM05D006320 ORTHO05D007069 1.8e-14 82.4 58 81.0
CANSAT21G1924 Cannabis sativa HOM05D006320 ORTHO05D007069 4.0e-14 81.3 57 80.7
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 4.0e-14 81.3 57 80.7
CAN.G761.5 Capsicum annuum HOM05D012609 ORTHO05D007069 6.8e-14 80.5 61 73.8
SHI49662 Sapria himalayana HOM05D006320 ORTHO05D007069 6.8e-14 80.5 58 81.0
Sc08g0004610 Simmondsia chinensis HOM05D006320 ORTHO05D007069 6.8e-14 80.5 61 75.4
Nitab4.5_0002418g0080 Nicotiana tabacum HOM05D006320 ORTHO05D007069 3.4e-13 78.2 59 71.2
SHI39076 Sapria himalayana HOM05D006320 ORTHO05D007069 5.7e-13 77.4 58 75.9
Sopen12g013690 Solanum pennellii HOM05D006320 ORTHO05D007069 9.8e-13 76.6 60 73.3
SHI36574 Sapria himalayana HOM05D006320 ORTHO05D007069 3.7e-12 74.7 48 85.4
SHI39478 Sapria himalayana HOM05D006320 ORTHO05D007069 3.7e-12 74.7 53 77.4
SHI40933 Sapria himalayana HOM05D000743 ORTHO05D000580 6.3e-12 73.9 48 83.3
PGSC0003DMG400002202 Solanum tuberosum HOM05D006320 ORTHO05D007069 6.3e-12 73.9 53 77.4
SHI51623 Sapria himalayana HOM05D006320 ORTHO05D007069 1.1e-11 73.2 48 83.3
Nitab4.5_0001152g0710 Nicotiana tabacum HOM05D006320 ORTHO05D007069 1.8e-11 72.4 60 66.7
SHI41650 Sapria himalayana HOM05D000743 ORTHO05D000580 4.1e-11 71.2 47 83.0
SEGI_10818 Sequoiadendron giganteum HOM05D006320 ORTHO05D007069 4.1e-11 71.2 69 63.8
CAN.G547.1 Capsicum annuum HOM05D006320 ORTHO05D007069 9.1e-11 70.1 51 76.5
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 9.1e-11 70.1 43 88.4
SHI25012 Sapria himalayana HOM05D006320 ORTHO05D007069 3.5e-10 68.2 61 67.2
Lsat_1_v5_gn_7_80061 Lactuca sativa HOM05D006320 ORTHO05D007069 7.7e-10 67.0 60 68.3
Manes.04G128250 Manihot esculenta HOM05D006320 ORTHO05D007069 1.0e-09 66.6 46 82.6
Nitab4.5_0000172g1200 Nicotiana tabacum HOM05D007924 ORTHO05D007069 1.7e-09 65.9 56 64.3
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 2.9e-09 65.1 72 58.3
CiPaw.06G021700 Carya illinoinensis HOM05D006320 ORTHO05D007069 5.0e-09 64.3 42 81.0
Cre17.g731950 Chlamydomonas reinhardtii HOM05D006320 ORTHO05D007069 5.0e-09 64.3 61 54.1
Cre17.g732000 Chlamydomonas reinhardtii HOM05D006320 ORTHO05D007069 5.0e-09 64.3 61 54.1
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 6.5e-09 63.9 49 75.5
ATMG00040 Arabidopsis thaliana HOM05D010793 ORTHO05D011945 1.1e-08 63.2 42 83.3
CARHR282610 Cardamine hirsuta HOM05D010793 ORTHO05D011945 1.1e-08 63.2 42 83.3
Peaxi162Scf00828g00512 Petunia axillaris HOM05D006320 ORTHO05D007069 1.5e-08 62.8 58 62.1
Peaxi162Scf03787g00001 Petunia axillaris HOM05D006320 ORTHO05D007069 1.5e-08 62.8 58 62.1
Os01g0899275 Oryza sativa ssp. japonica HOM05D006320 ORTHO05D007069 3.2e-08 61.6 39 84.6
SHI36078 Sapria himalayana HOM05D000743 ORTHO05D007069 9.4e-08 60.1 36 86.1
SHI15041 Sapria himalayana HOM05D006320 ORTHO05D007069 1.2e-07 59.7 44 77.3
Haze_26208 Corylus avellana HOM05D006320 ORTHO05D007069 1.6e-07 59.3 57 59.6
Haze_26209 Corylus avellana HOM05D006320 ORTHO05D007069 1.6e-07 59.3 57 59.6
Lsat_1_v5_gn_3_89840 Lactuca sativa HOM05D006320 ORTHO05D007069 1.6e-07 59.3 54 63.0
TAR022G0003 Trochodendron aralioides HOM05D006320 ORTHO05D007069 1.6e-07 59.3 61 57.4
CiPaw.04G019500 Carya illinoinensis HOM05D006320 ORTHO05D007069 2.7e-07 58.5 60 55.0
C04p27420 Brassica napus HOM05D006320 ORTHO05D007069 3.6e-07 58.2 47 72.3
Os01g0899350 Oryza sativa ssp. japonica HOM05D006320 ORTHO05D007069 3.6e-07 58.2 38 81.6
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 4.7e-07 57.8 36 80.6
TAR424G0002 Trochodendron aralioides HOM05D006320 ORTHO05D007069 1.0e-06 56.6 58 55.2
Nitab4.5_0005246g0040 Nicotiana tabacum HOM05D007924 ORTHO05D007069 4.0e-06 54.7 43 69.8
HanXRQChr08g0236091 Helianthus annuus HOM05D006320 ORTHO05D007069 5.2e-06 54.3 61 57.4
HanXRQChr16g0504511 Helianthus annuus HOM05D006320 ORTHO05D007069 5.2e-06 54.3 61 57.4
HanXRQMTg0579331 Helianthus annuus HOM05D006320 ORTHO05D007069 5.2e-06 54.3 61 57.4
Mapoly3785s0001 Marchantia polymorpha HOM05D006320 ORTHO05D007069 6.8e-06 53.9 58 56.9


User provided reference genes

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