Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 2.7e-48 194.9 91 100.0
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 5.3e-36 154.1 91 81.3
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 1.7e-34 149.1 77 92.2
SHI40238 Sapria himalayana HOM05D010923 ORTHO05D003989 8.4e-34 146.7 84 84.5
SHI35683 Sapria himalayana HOM05D000558 ORTHO05D001857 8.2e-29 130.2 64 89.1
SHI35822 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-28 129.4 77 81.8
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 1.5e-27 125.9 92 69.6
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 1.0e-26 123.2 61 88.5
SHI46441 Sapria himalayana HOM05D010923 ORTHO05D003989 8.4e-26 120.2 91 70.3
SHI37256 Sapria himalayana HOM05D010923 ORTHO05D001219 1.1e-25 119.8 91 70.3
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 6.0e-24 114.0 77 75.3
SHI43902 Sapria himalayana HOM05D010923 ORTHO05D003989 1.9e-17 92.4 47 93.6
SHI44502 Sapria himalayana HOM05D010923 ORTHO05D003989 1.9e-17 92.4 47 93.6
SHI47575 Sapria himalayana HOM05D010923 ORTHO05D003989 1.9e-17 92.4 47 93.6
SHI48148 Sapria himalayana HOM05D010923 ORTHO05D003989 1.9e-17 92.4 47 93.6
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-16 89.7 54 77.8
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-16 89.7 55 78.2
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-16 89.7 54 77.8
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 4.6e-16 87.8 52 80.8
SHI35267 Sapria himalayana HOM05D000849 ORTHO05D001857 1.4e-15 86.3 38 97.4
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 3.9e-15 84.7 71 67.6
SHI01895 Sapria himalayana HOM05D000849 ORTHO05D003989 9.1e-12 73.6 44 70.5
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 1.2e-11 73.2 112 40.2
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 40.2
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 39.3
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 39.3
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 39.3
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 39.3
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 39.3
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 40.2
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 40.2
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 40.2
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 39.3
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 1.5e-11 72.8 112 40.2
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 2.0e-11 72.4 112 39.3
SHI35365 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-11 72.4 43 72.1
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 2.6e-11 72.0 112 39.3
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 2.6e-11 72.0 112 39.3
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 2.6e-11 72.0 112 39.3
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 2.6e-11 72.0 112 39.3
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 2.6e-11 72.0 112 39.3
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 2.6e-11 72.0 112 39.3
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 4.5e-11 71.2 94 42.6
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 38.4
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 38.4
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 38.4
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 38.4
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 38.4
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 39.3
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 39.3
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 39.3
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 5.9e-11 70.9 112 39.3
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 38.4
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 40.2
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 40.2
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 38.4
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 38.4
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 38.4
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 38.4
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 40.2
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 7.7e-11 70.5 112 39.3
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 1.0e-10 70.1 112 39.3
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 1.3e-10 69.7 112 39.3
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 1.3e-10 69.7 112 39.3
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 1.3e-10 69.7 112 39.3
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 1.3e-10 69.7 112 39.3
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 1.3e-10 69.7 112 39.3
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 1.3e-10 69.7 112 38.4
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 1.7e-10 69.3 112 39.3
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 1.7e-10 69.3 112 39.3
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 1.7e-10 69.3 112 39.3
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 1.7e-10 69.3 112 39.3
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 1.7e-10 69.3 112 39.3
SHI54080 Sapria himalayana HOM05D000849 ORTHO05D003989 1.7e-10 69.3 43 72.1
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 1.7e-10 69.3 112 37.5
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 1.7e-10 69.3 112 39.3
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 2.9e-10 68.6 112 39.3
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 39.3
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 38.4
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 38.4
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 38.4
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 38.4
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 38.4
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 38.4
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 37.5
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 37.5
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 38.4
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 3.8e-10 68.2 112 38.4
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 38.4
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 38.4
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 38.4
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 38.4
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 37.5
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 37.5
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 38.4
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 38.4
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 5.0e-10 67.8 112 38.4
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 38.4
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 38.4
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 37.5
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 38.4
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 39.3
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 39.3
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 39.3
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 37.5
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 6.5e-10 67.4 112 37.5
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 8.5e-10 67.0 112 37.5
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 8.5e-10 67.0 49 65.3
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 8.5e-10 67.0 49 65.3
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 8.5e-10 67.0 112 37.5
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 1.1e-09 66.6 112 37.5
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 1.1e-09 66.6 112 37.5
SHI27184 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-09 66.6 46 65.2
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 1.1e-09 66.6 112 36.6
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 1.1e-09 66.6 112 36.6
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.4e-09 66.2 112 35.7
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 1.4e-09 66.2 112 37.5
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.9e-09 65.9 112 37.5
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 1.9e-09 65.9 112 37.5
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 1.9e-09 65.9 112 36.6
SHI33029 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-09 65.9 35 80.0
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 1.9e-09 65.9 112 35.7
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 1.9e-09 65.9 112 37.5
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 1.9e-09 65.9 112 37.5
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 1.9e-09 65.9 112 37.5
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 1.9e-09 65.9 112 37.5
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 2.5e-09 65.5 112 38.4
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 3.2e-09 65.1 112 36.6
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 5.5e-09 64.3 112 36.6
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.5e-09 64.3 112 36.6
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.5e-09 64.3 112 36.6
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 5.5e-09 64.3 112 36.6
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 5.5e-09 64.3 112 37.5
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 7.2e-09 63.9 112 36.6
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 9.4e-09 63.5 29 96.6
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 1.2e-08 63.2 112 35.7
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 1.2e-08 63.2 112 35.7
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 1.2e-08 63.2 112 35.7
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 1.6e-08 62.8 112 34.8
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 1.6e-08 62.8 124 33.9
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 2.1e-08 62.4 112 35.7
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 2.1e-08 62.4 112 35.7
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-08 62.4 29 89.7
SHI51484 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-08 62.4 54 61.1
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 2.1e-08 62.4 112 34.8
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 2.1e-08 62.4 112 35.7
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 3.6e-08 61.6 66 50.0
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 3.6e-08 61.6 66 50.0
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 7.9e-08 60.5 112 33.0
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 7.9e-08 60.5 34 79.4
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 1.4e-07 59.7 29 93.1
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 1.8e-07 59.3 108 36.1
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 3.0e-07 58.5 81 43.2
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 3.0e-07 58.5 112 33.0
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 5.1e-07 57.8 66 45.5
SHI34965 Sapria himalayana HOM05D000849 ORTHO05D003989 5.1e-07 57.8 26 92.3
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 8.8e-07 57.0 80 42.5
SHI19583 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-06 55.8 55 52.7
SHI49175 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-06 55.8 33 75.8
SHI06560 Sapria himalayana HOM05D000849 ORTHO05D003989 4.4e-06 54.7 32 75.0
Thhalv10002117m.g Eutrema salsugineum HOM05D000849 ORTHO05D003989 9.7e-06 53.5 62 46.8


User provided reference genes

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