Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36350 Sapria himalayana HOM05D001607 ORTHO05D010610 1.4e-29 132.1 60 100.0
SHI36760 Sapria himalayana HOM05D001607 ORTHO05D010610 1.6e-28 128.6 60 96.7
SHI51481 Sapria himalayana HOM05D001607 ORTHO05D010610 5.9e-28 126.7 59 94.9
SHI53323 Sapria himalayana HOM05D001607 ORTHO05D010610 5.0e-27 123.6 59 94.9
SHI53307 Sapria himalayana HOM05D001607 ORTHO05D010610 1.5e-26 122.1 60 91.7
SHI51257 Sapria himalayana HOM05D001607 ORTHO05D010610 1.2e-25 119.0 59 91.5
SHI51373 Sapria himalayana HOM05D001607 ORTHO05D010610 6.1e-25 116.7 59 89.8
SHI52825 Sapria himalayana HOM05D001607 ORTHO05D001893 1.8e-24 115.2 58 87.9
SHI27291 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-21 105.5 58 84.5
SHI50875 Sapria himalayana HOM05D001607 ORTHO05D010610 1.4e-21 105.5 59 81.4
SHI51659 Sapria himalayana HOM05D001607 ORTHO05D001893 3.2e-21 104.4 59 79.7
SHI51575 Sapria himalayana HOM05D001607 ORTHO05D001893 9.2e-21 102.8 58 82.8
SHI47040 Sapria himalayana HOM05D001607 ORTHO05D010610 2.0e-20 101.7 59 79.7
SHI52001 Sapria himalayana HOM05D001607 ORTHO05D010610 2.0e-20 101.7 59 79.7
SHI47121 Sapria himalayana HOM05D001607 ORTHO05D010610 4.6e-20 100.5 58 81.0
SHI51493 Sapria himalayana HOM05D001607 ORTHO05D001893 1.0e-19 99.4 58 82.8
SHI49988 Sapria himalayana HOM05D001607 ORTHO05D010610 1.7e-19 98.6 58 77.6
SHI51314 Sapria himalayana HOM05D001607 ORTHO05D010610 1.7e-19 98.6 58 77.6
SHI51363 Sapria himalayana HOM05D001607 ORTHO05D010610 3.0e-19 97.8 58 79.3
SHI50967 Sapria himalayana HOM05D001607 ORTHO05D010610 1.5e-18 95.5 56 82.1
SHI51100 Sapria himalayana HOM05D001607 ORTHO05D010610 3.3e-18 94.4 59 76.3
SHI50518 Sapria himalayana HOM05D001607 ORTHO05D010610 8.6e-11 69.7 45 71.1
SHI38909 Sapria himalayana HOM05D001607 ORTHO05D010610 5.6e-10 67.0 28 100.0
SHI19793 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-09 65.9 91 44.0
SHI51824 Sapria himalayana HOM05D001607 ORTHO05D010610 2.1e-09 65.1 28 92.9
SHI53343 Sapria himalayana HOM05D001607 ORTHO05D010610 2.8e-09 64.7 27 100.0
SHI54211 Sapria himalayana HOM05D001607 ORTHO05D010610 2.8e-09 64.7 27 100.0
SHI52576 Sapria himalayana HOM05D001607 ORTHO05D010610 8.1e-09 63.2 28 92.9
SHI53064 Sapria himalayana HOM05D001607 ORTHO05D010610 8.1e-09 63.2 27 96.3
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 1.1e-08 62.8 91 45.1
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 1.4e-08 62.4 84 47.6
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.8e-08 62.0 84 42.9
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 1.8e-08 62.0 84 42.9
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 1.8e-08 62.0 84 42.9
SHI50996 Sapria himalayana HOM05D001607 ORTHO05D010610 1.8e-08 62.0 28 92.9
SHI52823 Sapria himalayana HOM05D001607 ORTHO05D010610 1.8e-08 62.0 28 92.9
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 1.8e-08 62.0 85 43.5
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 2.3e-08 61.6 85 44.7
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 2.3e-08 61.6 84 42.9
SHI50834 Sapria himalayana HOM05D001607 ORTHO05D010610 2.3e-08 61.6 27 92.6
SHI52916 Sapria himalayana HOM05D001607 ORTHO05D010610 2.3e-08 61.6 27 92.6
SHI53240 Sapria himalayana HOM05D001607 ORTHO05D010610 2.3e-08 61.6 28 89.3
SHI54070 Sapria himalayana HOM05D001607 ORTHO05D010610 2.3e-08 61.6 28 89.3
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 3.1e-08 61.2 84 42.9
SHI52799 Sapria himalayana HOM05D001607 ORTHO05D010610 3.1e-08 61.2 27 96.3
SHI52897 Sapria himalayana HOM05D001607 ORTHO05D010610 3.1e-08 61.2 27 96.3
SHI53468 Sapria himalayana HOM05D001607 ORTHO05D001893 3.1e-08 61.2 27 92.6
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 4.0e-08 60.8 84 41.7
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 4.0e-08 60.8 84 41.7
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 4.0e-08 60.8 84 41.7
SHI51434 Sapria himalayana HOM05D001607 ORTHO05D010610 4.0e-08 60.8 27 96.3
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 4.0e-08 60.8 84 41.7
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 5.2e-08 60.5 84 41.7
SHI52836 Sapria himalayana HOM05D001607 ORTHO05D010610 5.2e-08 60.5 27 92.6
SHI52885 Sapria himalayana HOM05D001607 ORTHO05D010610 5.2e-08 60.5 28 89.3
SHI53663 Sapria himalayana HOM05D001607 ORTHO05D010610 5.2e-08 60.5 27 96.3
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 6.8e-08 60.1 85 43.5
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 6.8e-08 60.1 84 41.7
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 8.9e-08 59.7 84 41.7
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 8.9e-08 59.7 84 42.9
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 8.9e-08 59.7 91 42.9
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 8.9e-08 59.7 84 41.7
SHI53915 Sapria himalayana HOM05D001607 ORTHO05D010610 8.9e-08 59.7 27 92.6
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 1.2e-07 59.3 84 41.7
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 1.2e-07 59.3 84 41.7
SHI51502 Sapria himalayana HOM05D001607 ORTHO05D010610 1.2e-07 59.3 28 85.7
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.5e-07 58.9 84 40.5
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.5e-07 58.9 84 40.5
Ca_05502_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.5e-07 58.9 84 41.7
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 1.5e-07 58.9 84 42.9
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 1.5e-07 58.9 84 41.7
SHI20615 Sapria himalayana HOM05D001607 ORTHO05D010610 1.5e-07 58.9 27 92.6
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 2.0e-07 58.5 84 45.2
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 2.0e-07 58.5 72 45.8
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 2.0e-07 58.5 84 40.5
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 2.0e-07 58.5 84 39.3
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 2.0e-07 58.5 84 41.7
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 2.0e-07 58.5 84 40.5
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.6e-07 58.2 84 41.7
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.6e-07 58.2 84 41.7
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.6e-07 58.2 84 41.7
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 2.6e-07 58.2 85 42.4
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 3.4e-07 57.8 81 40.7
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 3.4e-07 57.8 84 40.5
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 3.4e-07 57.8 84 40.5
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 3.4e-07 57.8 84 40.5
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 3.4e-07 57.8 84 40.5
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 3.4e-07 57.8 84 41.7
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 3.4e-07 57.8 84 41.7
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 4.4e-07 57.4 85 42.4
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 4.4e-07 57.4 85 42.4
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 4.4e-07 57.4 84 41.7
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 4.4e-07 57.4 84 41.7
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 4.4e-07 57.4 84 40.5
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 4.4e-07 57.4 84 41.7
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 4.4e-07 57.4 84 40.5
Gohir.D08G110716 Gossypium hirsutum HOM05D001607 ORTHO05D001893 5.8e-07 57.0 84 40.5
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 5.8e-07 57.0 84 40.5
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 5.8e-07 57.0 84 40.5
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 5.8e-07 57.0 84 40.5
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 5.8e-07 57.0 84 40.5
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 5.8e-07 57.0 84 40.5
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 7.6e-07 56.6 81 39.5
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 7.6e-07 56.6 84 39.3
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 7.6e-07 56.6 84 40.5
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 7.6e-07 56.6 84 41.7
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 9.9e-07 56.2 81 40.7
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 1.3e-06 55.8 84 39.3
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 1.3e-06 55.8 84 40.5
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 1.3e-06 55.8 84 39.3
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 1.3e-06 55.8 84 39.3
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 1.7e-06 55.5 84 40.5
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 2.2e-06 55.1 84 38.1
SHI42267 Sapria himalayana HOM05D000648 ORTHO05D001893 2.2e-06 55.1 33 72.7
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 2.9e-06 54.7 84 40.5
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 2.9e-06 54.7 84 40.5
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 2.9e-06 54.7 84 39.3
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 3.7e-06 54.3 84 39.3
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 3.7e-06 54.3 84 39.3
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 4.9e-06 53.9 85 41.2
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 4.9e-06 53.9 84 38.1
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 4.9e-06 53.9 84 39.3
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 6.4e-06 53.5 85 42.4
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 6.4e-06 53.5 84 39.3
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 8.4e-06 53.1 85 41.2
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 8.4e-06 53.1 84 39.3
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 8.4e-06 53.1 84 36.9
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 8.4e-06 53.1 84 38.1


User provided reference genes

Program Settings