Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 0.0e+00 1156.0 573 100.0
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 9.5e-192 674.1 600 64.7
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-180 636.3 607 61.8
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-172 609.8 542 64.8
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-106 391.3 423 57.2
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 4.7e-98 362.8 562 45.2
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-95 354.4 419 53.0
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-92 344.7 623 42.2
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 6.8e-89 332.4 312 61.9
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 7.0e-86 322.4 256 68.8
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-85 320.1 359 53.8
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 4.9e-71 273.1 235 66.4
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-70 271.6 305 55.4
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-68 265.4 513 40.0
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-68 264.2 258 60.1
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 2.4e-65 254.2 374 45.7
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 6.9e-65 252.7 181 75.7
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-59 235.3 256 55.9
SHI38034 Sapria himalayana HOM05D001560 ORTHO05D366272 2.5e-59 234.2 144 82.6
SHI35324 Sapria himalayana HOM05D008435 ORTHO05D366693 5.6e-59 233.0 143 85.3
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-57 228.0 232 55.6
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-56 225.3 259 54.4
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-48 196.4 174 64.9
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-46 189.9 221 55.7
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-45 188.3 193 58.0
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-44 185.7 182 59.3
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-38 164.1 140 64.3
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-38 164.1 140 64.3
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-37 160.6 287 42.5
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 4.3e-35 153.7 102 78.4
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-33 147.5 220 45.5
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-31 139.4 261 39.1
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-30 137.9 120 63.3
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-23 113.2 149 47.7
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-23 113.2 149 47.7
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 5.1e-20 103.6 94 58.5
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-19 101.3 112 51.8
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 5.7e-19 100.1 90 60.0
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 4.8e-18 97.1 116 47.4
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-17 95.9 100 53.0
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-17 95.1 112 50.9
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-17 94.7 122 45.9
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 4.1e-17 94.0 111 49.5
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 5.3e-17 93.6 109 49.5
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 9.1e-17 92.8 111 48.6
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 9.1e-17 92.8 111 48.6
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.5e-16 92.0 111 49.5
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 2.0e-16 91.7 111 48.6
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 2.6e-16 91.3 111 47.7
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 2.6e-16 91.3 111 48.6
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 2.6e-16 91.3 111 48.6
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 2.6e-16 91.3 111 48.6
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 2.6e-16 91.3 111 47.7
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 2.6e-16 91.3 111 48.6
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.9e-16 90.1 112 47.3
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.9e-16 90.1 112 47.3
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.9e-16 90.1 112 47.3
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 5.9e-16 90.1 111 47.7
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 5.9e-16 90.1 111 47.7
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 7.7e-16 89.7 89 57.3
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.0e-15 89.4 111 47.7
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.0e-15 89.4 111 47.7
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.0e-15 89.4 111 47.7
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.0e-15 89.4 111 47.7
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.0e-15 89.4 111 47.7
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-15 89.0 112 46.4
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 1.7e-15 88.6 111 47.7
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 2.2e-15 88.2 111 47.7
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.9e-15 87.8 108 47.2
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 5.0e-15 87.0 111 47.7
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 5.0e-15 87.0 111 46.8
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-14 85.9 112 46.4
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 1.1e-14 85.9 111 45.9
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 2.5e-14 84.7 111 45.9
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-13 81.6 106 48.1
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 6.1e-13 80.1 105 49.5
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 6.1e-13 80.1 105 49.5
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 1.0e-12 79.3 51 72.5
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-12 77.8 99 46.5
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-12 77.8 64 64.1
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-12 77.0 99 46.5
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.0e-11 75.1 85 51.8
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-10 72.0 112 43.8
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 1.1e-09 69.3 66 54.5
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 9.1e-09 66.2 34 91.2
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 4.5e-08 63.9 94 42.6
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-08 63.9 31 90.3
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 7.7e-08 63.2 29 93.1
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-07 62.8 30 90.0
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-07 62.8 29 93.1
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.3e-07 62.4 107 33.6
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-07 62.4 29 89.7
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 2.2e-07 61.6 33 87.9
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 2.2e-07 61.6 33 87.9
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-07 61.6 29 89.7
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-07 61.2 29 89.7
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.9e-07 61.2 41 70.7
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-07 60.8 30 86.7
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-07 60.8 31 83.9
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 5.0e-07 60.5 103 38.8
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 6.5e-07 60.1 30 86.7
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 6.5e-07 60.1 33 84.8
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 6.5e-07 60.1 29 89.7
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-07 59.7 29 86.2
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-06 59.3 29 86.2
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 1.1e-06 59.3 34 82.4
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 1.1e-06 59.3 33 84.8
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.5e-06 58.9 106 33.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-06 58.9 29 86.2
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-06 58.9 103 35.9
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 1.9e-06 58.5 29 86.2
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.9e-06 58.5 29 86.2
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 1.9e-06 58.5 29 86.2
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 1.9e-06 58.5 29 86.2
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 1.9e-06 58.5 29 86.2
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 1.9e-06 58.5 29 86.2
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 2.5e-06 58.2 29 86.2
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.5e-06 58.2 29 82.8
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-06 57.0 29 86.2
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.2e-06 56.6 27 88.9
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.2e-06 56.6 29 86.2


User provided reference genes

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