Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-116 420.6 203 100.0
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-79 298.9 250 66.0
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 8.6e-79 297.4 242 67.4
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-78 296.6 253 65.2
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 5.6e-78 294.7 252 65.1
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-74 283.5 243 65.0
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-70 268.9 243 63.0
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-66 255.8 241 60.6
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-64 249.2 176 73.9
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-64 249.2 176 73.9
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-62 241.1 253 56.1
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 5.8e-59 231.5 261 54.0
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-59 231.1 202 63.9
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-57 226.9 265 51.7
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-57 224.6 214 60.7
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-55 218.4 214 58.4
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-54 217.2 152 73.0
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-54 217.2 152 73.0
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-54 216.5 195 62.1
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-53 211.8 197 58.4
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-50 202.6 185 61.6
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-49 199.5 242 50.8
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-49 198.7 217 54.8
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-48 197.2 225 54.7
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 6.0e-48 194.9 196 58.7
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-47 192.6 290 45.5
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-45 185.3 182 59.3
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-45 184.9 130 76.2
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-43 178.7 133 68.4
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.4e-41 173.7 136 64.7
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.9e-41 173.3 111 76.6
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 6.0e-40 168.3 110 75.5
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-40 168.3 147 60.5
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 5.1e-39 165.2 132 64.4
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 5.1e-39 165.2 132 64.4
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 5.1e-39 165.2 132 64.4
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.1e-39 165.2 132 64.4
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-39 165.2 203 51.7
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 5.1e-39 165.2 132 64.4
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 8.7e-39 164.5 132 64.4
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 8.7e-39 164.5 132 64.4
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.1e-38 164.1 132 63.6
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.1e-38 164.1 132 63.6
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 2.5e-38 162.9 132 63.6
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 2.5e-38 162.9 132 63.6
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 3.3e-38 162.5 132 63.6
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-38 162.5 128 67.2
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 4.3e-38 162.2 132 63.6
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 4.3e-38 162.2 146 59.6
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 4.3e-38 162.2 146 59.6
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 4.3e-38 162.2 132 63.6
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 4.3e-38 162.2 145 60.0
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 4.3e-38 162.2 145 60.0
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 4.3e-38 162.2 145 60.0
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 5.6e-38 161.8 146 59.6
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 7.4e-38 161.4 132 63.6
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 7.4e-38 161.4 132 63.6
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 7.4e-38 161.4 132 63.6
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 7.4e-38 161.4 132 63.6
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.6e-37 160.2 145 59.3
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.6e-37 160.2 132 62.1
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 2.1e-37 159.8 142 58.5
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 2.1e-37 159.8 132 62.9
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 2.8e-37 159.5 146 58.9
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 2.8e-37 159.5 132 62.1
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 2.8e-37 159.5 147 57.8
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 3.7e-37 159.1 104 75.0
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 4.8e-37 158.7 132 62.1
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 4.8e-37 158.7 132 62.1
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 6.2e-37 158.3 132 62.1
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.2e-37 158.3 145 58.6
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 8.1e-37 157.9 129 62.8
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.1e-36 157.5 132 62.1
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.1e-36 157.5 132 62.1
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-36 157.1 133 62.4
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.8e-36 156.8 145 57.9
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.8e-36 156.8 145 57.9
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 2.4e-36 156.4 132 62.1
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 2.4e-36 156.4 132 62.1
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 3.1e-36 156.0 148 58.1
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 6.9e-36 154.8 132 61.4
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 9.0e-36 154.5 148 56.8
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.2e-35 154.1 104 74.0
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.8e-35 151.8 133 60.2
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.2e-33 145.6 140 57.1
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 5.5e-33 145.2 73 91.8
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 9.3e-33 144.4 73 91.8
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 4.6e-32 142.1 73 90.4
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 4.6e-32 142.1 73 90.4
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 4.6e-32 142.1 73 90.4
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 4.6e-32 142.1 73 90.4
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 7.9e-32 141.4 73 90.4
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.0e-31 141.0 73 89.0
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.3e-31 139.8 73 89.0
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.7e-31 138.3 73 89.0
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-31 137.9 68 94.1
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 7.4e-30 134.8 68 92.6
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 9.6e-30 134.4 68 92.6
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 9.6e-30 134.4 68 91.2
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-29 134.0 68 91.2
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-29 134.0 68 91.2
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-29 134.0 127 56.7
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.6e-29 133.7 73 86.3
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-29 131.3 68 89.7
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-28 131.0 72 87.5
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.8e-28 130.2 147 46.9
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-28 130.2 64 93.8
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-28 130.2 68 89.7
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-28 129.8 68 91.2
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 4.1e-28 129.0 121 57.0
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-28 129.0 147 51.0
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 6.9e-28 128.3 68 88.2
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 6.9e-28 128.3 68 88.2
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-27 127.1 68 89.7
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-27 126.7 124 55.6
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 2.6e-27 126.3 68 86.8
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-27 125.9 68 88.2
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 4.5e-27 125.6 68 86.8
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 4.5e-27 125.6 68 86.8
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 4.5e-27 125.6 68 86.8
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 4.5e-27 125.6 68 86.8
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 5.9e-27 125.2 112 59.8
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 8.4e-26 121.3 64 89.1
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.4e-25 120.6 68 83.8
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-25 120.6 68 85.3
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.9e-25 120.2 112 58.0
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.9e-25 120.2 73 79.5
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 7.2e-25 118.2 73 72.6
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-24 117.5 94 64.9
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 6.1e-24 115.2 131 51.1
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.9e-24 114.8 68 79.4
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-23 112.1 110 55.5
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.7e-23 111.3 67 77.6
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 9.7e-22 107.8 113 52.2
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-18 95.1 68 70.6
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.7e-16 89.7 58 74.1
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-15 85.9 52 80.8
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 2.0e-14 83.6 44 86.4
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 5.7e-14 82.0 48 79.2
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-13 79.7 117 44.4
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 2.8e-13 79.7 87 47.1
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-12 77.8 188 37.8
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.9e-12 75.1 36 91.7
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.0e-10 71.2 50 68.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-10 70.1 48 72.9
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.8e-10 69.3 39 82.1
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 9.4e-09 64.7 106 37.7
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-08 62.0 37 81.1
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.4e-07 60.8 53 60.4
SHI42054 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-07 58.5 27 96.3
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.0e-06 57.0 31 83.9


User provided reference genes

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