Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI36048 Sapria himalayana HOM05D003666 ORTHO05D004770 1.1e-59 233.0 116 100.0
SHI21046 Sapria himalayana HOM05D003666 ORTHO05D004770 7.0e-33 144.1 87 85.1
SHI36045 Sapria himalayana HOM05D003666 ORTHO05D004770 3.5e-24 115.2 160 46.9
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.8e-10 68.9 38 81.6
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.8e-10 68.9 38 81.6
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.8e-10 68.9 38 81.6
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.8e-10 68.9 38 81.6
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 6.3e-10 67.8 37 81.1
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 6.3e-10 67.8 37 81.1
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 6.3e-10 67.8 37 81.1
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 6.3e-10 67.8 37 81.1
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 6.3e-10 67.8 37 81.1
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 8.3e-10 67.4 37 81.1
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 8.3e-10 67.4 37 81.1
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 8.3e-10 67.4 37 81.1
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 8.3e-10 67.4 37 81.1
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 1.8e-09 66.2 37 78.4
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 1.8e-09 66.2 37 78.4
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
BolSC28t60438H Brassica oleracea HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
BraSC48t46269Z Brassica rapa HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 3.1e-09 65.5 37 78.4
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 4.1e-09 65.1 37 78.4
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 4.1e-09 65.1 37 78.4
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 4.1e-09 65.1 37 78.4
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 5.4e-09 64.7 37 75.7
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 5.4e-09 64.7 37 75.7
BcaC05g26875 Brassica carinata HOM05D003666 ORTHO05D004770 5.4e-09 64.7 37 78.4
CARHR288310 Cardamine hirsuta HOM05D003666 ORTHO05D004770 7.0e-09 64.3 37 75.7
BolC6t36214H Brassica oleracea HOM05D003666 ORTHO05D004770 9.1e-09 63.9 37 78.4
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.2e-08 63.5 38 76.3
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.2e-08 63.5 38 76.3
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 2.0e-08 62.8 37 75.7
Thhalv10015926m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 4.5e-08 61.6 37 75.7
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.5e-08 61.6 38 73.7
SHI04382 Sapria himalayana HOM05D003666 ORTHO05D004770 5.9e-08 61.2 37 78.4
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.3e-07 59.3 38 73.7
Eucgr.E01604 Eucalyptus grandis HOM05D058756 ORTHO05D045342 1.9e-06 56.2 63 49.2


User provided reference genes

Program Settings