Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI35925 Sapria himalayana HOM05D014941 ORTHO05D003213 7.6e-61 236.9 112 100.0
SHI49412 Sapria himalayana HOM05D014941 ORTHO05D003213 3.2e-51 204.9 114 88.6
SHI46859 Sapria himalayana HOM05D000107 ORTHO05D000062 4.3e-48 194.5 122 77.9
SHI41980 Sapria himalayana HOM05D014941 ORTHO05D003213 8.2e-47 190.3 114 84.2
SHI03580 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-44 183.0 122 75.4
SHI29589 Sapria himalayana HOM05D000107 ORTHO05D003213 2.0e-37 159.1 104 75.0
SHI10721 Sapria himalayana HOM05D000107 ORTHO05D000062 3.4e-29 131.7 109 65.1
SHI06149 Sapria himalayana HOM05D000107 ORTHO05D000062 2.4e-22 109.0 112 53.6
Rhsim01G0019000 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-18 95.9 128 39.8
Atru.chr6.157 Acer truncatum HOM05D000107 ORTHO05D000062 6.7e-17 90.9 123 38.2
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.7e-17 90.9 128 39.1
RhsimUnG0032800 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.7e-17 90.9 128 39.1
Atru.chr4.1235 Acer truncatum HOM05D000107 ORTHO05D000062 4.4e-16 88.2 123 38.2
Rhsim09G0096400 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-16 88.2 128 42.2
Atru.chr1.1855 Acer truncatum HOM05D000107 ORTHO05D000062 1.1e-14 83.6 123 37.4
SHI37545 Sapria himalayana HOM05D014941 ORTHO05D003213 1.4e-14 83.2 45 91.1
SHI35943 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-14 82.8 45 86.7
SHI38857 Sapria himalayana HOM05D000616 ORTHO05D000233 4.1e-14 81.6 45 84.4
RcHm_v2.0_Chr1g0331761 Rosa chinensis HOM05D000107 ORTHO05D003213 5.3e-14 81.3 110 39.1
SHI12282 Sapria himalayana HOM05D000616 ORTHO05D000233 5.3e-14 81.3 58 69.0
SHI23009 Sapria himalayana HOM05D000107 ORTHO05D000062 1.6e-13 79.7 48 81.2
SHI28597 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-13 79.3 44 79.5
Atru.chr4.455 Acer truncatum HOM05D000107 ORTHO05D000062 1.3e-12 76.6 66 51.5
CANSAT54G0700 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-12 76.6 124 34.7
CANSAT80G0350 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-12 76.6 124 34.7
SHI39811 Sapria himalayana HOM05D000616 ORTHO05D000062 1.3e-12 76.6 43 83.7
Rhsim02G0154800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-12 75.5 66 51.5
Hma1.2p1_1033F.1_g250230 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 6.5e-12 74.3 66 48.5
MELO3C034551.2 Cucumis melo HOM05D007110 ORTHO05D000233 1.9e-11 72.8 124 34.7
FvH4_2g18191 Fragaria vesca HOM05D000539 ORTHO05D000233 7.2e-11 70.9 64 48.4
TWI32G1228 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.6e-10 69.7 122 31.1
CsaV3_1G024200 Cucumis sativus L. HOM05D000107 ORTHO05D000062 2.1e-10 69.3 120 30.8
CANSAT54G2061 Cannabis sativa HOM05D000107 ORTHO05D000062 2.7e-10 68.9 124 30.6
CANSAT64G3014 Cannabis sativa HOM05D000107 ORTHO05D000062 2.7e-10 68.9 124 30.6
CANSAT21G1204 Cannabis sativa HOM05D000107 ORTHO05D000062 6.1e-10 67.8 66 45.5
CsaV3_6G019030 Cucumis sativus L. HOM05D000107 ORTHO05D003213 6.1e-10 67.8 111 32.4
FvH4_1g29805 Fragaria vesca HOM05D000107 ORTHO05D000062 6.1e-10 67.8 64 48.4
RcHm_v2.0_Chr3g0495641 Rosa chinensis HOM05D000107 ORTHO05D003213 8.0e-10 67.4 68 48.5
CsaV3_1G029970 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.0e-09 67.0 66 42.4
CsaV3_1G031320 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.0e-09 67.0 66 42.4
CsaV3_5G015090 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.0e-09 67.0 66 42.4
CsaV3_6G032210 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.0e-09 67.0 66 42.4
AUR62026574 Chenopodium quinoa HOM05D002644 ORTHO05D000233 1.4e-09 66.6 65 44.6
MBI06_g42454_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 1.4e-09 66.6 66 45.5
CANSAT54G0813 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-09 66.2 66 43.9
CANSAT78G1485 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-09 66.2 124 31.5
CANSAT78G2361 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-09 66.2 66 43.9
FvH4_3g31743 Fragaria vesca HOM05D000107 ORTHO05D000062 1.8e-09 66.2 64 46.9
ECA232G3917 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.3e-09 65.9 68 42.6
CANSAT35G1642 Cannabis sativa HOM05D000107 ORTHO05D000062 3.0e-09 65.5 66 43.9
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 3.0e-09 65.5 96 36.5
FvH4_4g09213 Fragaria vesca HOM05D000107 ORTHO05D000062 3.0e-09 65.5 110 36.4
MBI18_g23349_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 5.2e-09 64.7 85 36.5
AUR62028503 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.8e-09 64.3 96 35.4
Ciclev10010251m.g Citrus clementina HOM05D000107 ORTHO05D003213 8.8e-09 63.9 64 40.6
Prupe.6G136200 Prunus persica HOM05D000107 ORTHO05D000062 8.8e-09 63.9 114 35.1
ECA246G2093 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-08 63.2 65 43.1
ECA246G5051 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-08 63.2 65 43.1
CsaV3_7G011410 Cucumis sativus L. HOM05D000107 ORTHO05D003213 2.0e-08 62.8 66 39.4
CANSAT80G1197 Cannabis sativa HOM05D000107 ORTHO05D000062 2.6e-08 62.4 66 40.9
Rhsim01G0178900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-08 62.4 65 43.1
Ciclev10003481m.g Citrus clementina HOM05D000107 ORTHO05D003213 3.4e-08 62.0 68 41.2
FvH4_4g08648 Fragaria vesca HOM05D000107 ORTHO05D000062 3.4e-08 62.0 64 45.3
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 3.4e-08 62.0 66 42.4
ECA232G2916 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.4e-08 61.6 65 43.1
FvH4_2g07753 Fragaria vesca HOM05D000107 ORTHO05D003213 4.4e-08 61.6 63 44.4
Rhsim10G0126500 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-08 61.6 64 46.9
RcHm_v2.0_Chr4g0417061 Rosa chinensis HOM05D000107 ORTHO05D000062 4.4e-08 61.6 62 45.2
Aqoxy3G01844 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 5.7e-08 61.2 128 30.5
FvH4_1g23803 Fragaria vesca HOM05D000107 ORTHO05D000062 5.7e-08 61.2 65 41.5
FvH4_5g18422 Fragaria vesca HOM05D000107 ORTHO05D000062 5.7e-08 61.2 63 44.4
CANSAT11G0105 Cannabis sativa HOM05D000107 ORTHO05D000062 9.8e-08 60.5 103 34.0
MBI08_g15727_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D003213 9.8e-08 60.5 65 43.1
MBI11_g22671_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.8e-08 60.5 65 41.5
PSO781G0225 Papaver somniferum HOM05D000107 ORTHO05D000062 9.8e-08 60.5 141 29.1
CANSAT01G1821 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-07 60.1 66 42.4
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-07 60.1 65 40.0
Rhsim06G0126900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 60.1 64 46.9
Rhsim11G0005900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 60.1 64 46.9
CsaV3_3G021750 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.7e-07 59.7 63 41.3
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 1.7e-07 59.7 67 41.8
CANSAT56G2720 Cannabis sativa HOM05D000107 ORTHO05D000062 2.2e-07 59.3 65 40.0
CANSAT21G0166 Cannabis sativa HOM05D000107 ORTHO05D000062 2.8e-07 58.9 66 37.9
CANSAT21G2308 Cannabis sativa HOM05D000107 ORTHO05D000062 2.8e-07 58.9 66 37.9
FvH4_3g30443 Fragaria vesca HOM05D000107 ORTHO05D000062 2.8e-07 58.9 63 41.3
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.8e-07 58.9 56 46.4
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-07 58.9 67 41.8
Ah.03g145030 Amaranthus hybridus HOM05D000107 ORTHO05D000568 3.7e-07 58.5 67 37.3
CANSAT80G1543 Cannabis sativa HOM05D000107 ORTHO05D000062 3.7e-07 58.5 66 33.3
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-07 58.5 64 40.6
RhsimUnG0068500 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-07 58.5 66 37.9
AUR62038926 Chenopodium quinoa HOM05D007123 ORTHO05D010541 6.3e-07 57.8 67 40.3
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.3e-07 57.8 65 36.9
ATR1201G001 Amborella trichopoda HOM05D000107 ORTHO05D003213 8.3e-07 57.4 67 40.3
CANSAT11G1794 Cannabis sativa HOM05D000107 ORTHO05D000062 8.3e-07 57.4 67 40.3
CANSAT80G1036 Cannabis sativa HOM05D000107 ORTHO05D000062 8.3e-07 57.4 66 31.8
AUR62024141 Chenopodium quinoa HOM05D007123 ORTHO05D003213 8.3e-07 57.4 68 38.2
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.3e-07 57.4 67 40.3
PSO566G0169 Papaver somniferum HOM05D000107 ORTHO05D000062 8.3e-07 57.4 141 28.4
PSO339G6471 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.0 139 28.1
TAR193G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.1e-06 57.0 97 34.0
CANSAT21G0908 Cannabis sativa HOM05D000107 ORTHO05D000062 1.4e-06 56.6 67 40.3
Nn5g28212 Nelumbo nucifera HOM05D000746 ORTHO05D000573 1.4e-06 56.6 47 46.8
Os07g0516500 Oryza sativa ssp. japonica HOM05D032447 ORTHO05D003213 1.4e-06 56.6 62 41.9
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.4e-06 56.6 62 40.3
CANSAT54G2011 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-06 56.2 66 31.8
CANSAT56G2540 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-06 56.2 66 31.8
AUR62040393 Chenopodium quinoa HOM05D007123 ORTHO05D000233 1.8e-06 56.2 67 41.8
PSO675G7458 Papaver somniferum HOM05D000107 ORTHO05D000062 1.8e-06 56.2 141 28.4
RcHm_v2.0_Chr6g0250691 Rosa chinensis HOM05D000539 ORTHO05D000592 1.8e-06 56.2 62 41.9
TWI15G0534 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.8e-06 56.2 65 43.1
TAR165G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.8e-06 56.2 97 35.1
AUR62042301 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.4e-06 55.8 67 41.8
Oeu027214.1 Olea europaea HOM05D000107 ORTHO05D003213 2.4e-06 55.8 104 30.8
TPR.G25200 Trifolium pratense HOM05D000107 ORTHO05D003213 2.4e-06 55.8 67 40.3
Ca_02256_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.1e-06 55.5 66 40.9
Ca_14973_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.1e-06 55.5 66 40.9
MELO3C033501.2 Cucumis melo HOM05D000539 ORTHO05D003213 3.1e-06 55.5 55 45.5
FvH4_2g21542 Fragaria vesca HOM05D000107 ORTHO05D000062 3.1e-06 55.5 64 34.4
PSO478G4396 Papaver somniferum HOM05D000107 ORTHO05D000062 3.1e-06 55.5 72 34.7
EL10Ac7g17430 Beta vulgaris HOM05D007123 ORTHO05D000233 4.1e-06 55.1 67 40.3
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-06 55.1 67 40.3
RhsimUnG0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-06 55.1 67 40.3
CANSAT25G3769 Cannabis sativa HOM05D000107 ORTHO05D000062 5.4e-06 54.7 67 38.8
FvH4_4g10051 Fragaria vesca HOM05D000107 ORTHO05D003213 5.4e-06 54.7 63 39.7
RcHm_v2.0_Chr5g0024741 Rosa chinensis HOM05D000107 ORTHO05D003213 5.4e-06 54.7 107 30.8
EL10Ac8g19929 Beta vulgaris HOM05D007123 ORTHO05D003213 7.0e-06 54.3 67 40.3
AUR62038710 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.0e-06 54.3 70 35.7
FvH4_2g04944 Fragaria vesca HOM05D000107 ORTHO05D000062 7.0e-06 54.3 107 31.8
Hma1.2p1_0154F.1_g068115 Hydrangea macrophylla HOM05D008315 ORTHO05D009452 7.0e-06 54.3 64 40.6
Hma1.2p1_0160F.1_g070785 Hydrangea macrophylla HOM05D008315 ORTHO05D009452 7.0e-06 54.3 64 40.6
PSO384G2963 Papaver somniferum HOM05D000107 ORTHO05D000062 7.0e-06 54.3 72 36.1
Rhsim10G0071800 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.0e-06 54.3 67 38.8
Rhsim12G0007200 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.0e-06 54.3 64 39.1
VMungo0251G1618 Vigna mungo HOM05D010139 ORTHO05D011906 7.0e-06 54.3 63 42.9
Ca_23983_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.1e-06 53.9 43 48.8
PSO017G0018 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO017G3036 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO017G3574 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO017G4888 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO063G6357 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO170G2938 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO170G5037 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO210G4007 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO210G7634 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO339G1393 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO339G1437 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO339G2651 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO339G6051 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO384G2035 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO384G3206 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO421G0292 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO423G0095 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO675G0159 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO675G2751 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO675G7509 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO675G7986 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO724G0904 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO781G0202 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO782G4565 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 65 35.4
PSO832G4110 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7
PSO832G4442 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 53.9 72 34.7


User provided reference genes

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