Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI35822 Sapria himalayana HOM05D010923 ORTHO05D003989 1.3e-63 246.1 117 100.0
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-28 129.0 77 81.8
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 2.4e-25 119.0 69 82.6
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 9.2e-25 117.1 77 75.3
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 2.5e-22 109.0 67 77.6
SHI40238 Sapria himalayana HOM05D010923 ORTHO05D003989 3.7e-18 95.1 67 73.1
SHI40091 Sapria himalayana HOM05D010923 ORTHO05D367824 1.1e-17 93.6 50 78.0
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-17 93.2 86 59.3
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 2.3e-15 85.9 94 54.3
SHI37256 Sapria himalayana HOM05D010923 ORTHO05D001219 8.6e-15 84.0 76 59.2
SHI46441 Sapria himalayana HOM05D010923 ORTHO05D003989 4.3e-14 81.6 56 75.0
SHI43902 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-12 75.9 40 87.5
SHI44502 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-12 75.9 40 87.5
SHI47575 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-12 75.9 40 87.5
SHI48148 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-12 75.9 40 87.5
SHI35267 Sapria himalayana HOM05D000849 ORTHO05D001857 5.2e-12 74.7 67 56.7
SHI35683 Sapria himalayana HOM05D000558 ORTHO05D001857 1.3e-10 70.1 59 61.0
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 4.9e-10 68.2 47 70.2
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 7.1e-09 64.3 52 65.4
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 7.1e-09 64.3 52 65.4
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 2.7e-08 62.4 37 73.0
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 4.6e-08 61.6 111 36.0
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
SHI33029 Sapria himalayana HOM05D000849 ORTHO05D003989 7.8e-08 60.8 52 59.6
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 7.8e-08 60.8 74 44.6
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 1.0e-07 60.5 74 44.6
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 1.0e-07 60.5 74 44.6
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 1.0e-07 60.5 74 44.6
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 1.0e-07 60.5 74 44.6
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 1.0e-07 60.5 74 43.2
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 1.0e-07 60.5 74 44.6
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 1.3e-07 60.1 74 43.2
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 1.7e-07 59.7 74 43.2
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 1.7e-07 59.7 74 43.2
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 1.7e-07 59.7 74 43.2
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 1.7e-07 59.7 74 43.2
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 1.7e-07 59.7 74 43.2
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 1.7e-07 59.7 74 43.2
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 2.3e-07 59.3 27 96.3
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 2.3e-07 59.3 27 96.3
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 3.0e-07 58.9 61 50.8
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 3.9e-07 58.5 74 41.9
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 3.9e-07 58.5 74 41.9
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 3.9e-07 58.5 74 41.9
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 3.9e-07 58.5 74 41.9
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 3.9e-07 58.5 74 41.9
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 3.9e-07 58.5 74 43.2
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 3.9e-07 58.5 74 43.2
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 3.9e-07 58.5 74 43.2
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 44.6
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 41.9
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 44.6
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 44.6
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 41.9
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 41.9
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 41.9
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 41.9
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 44.6
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 5.1e-07 58.2 74 43.2
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 6.6e-07 57.8 74 43.2
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 6.6e-07 57.8 74 43.2
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 8.6e-07 57.4 74 43.2
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 8.6e-07 57.4 74 43.2
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 8.6e-07 57.4 74 43.2
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 8.6e-07 57.4 74 43.2
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 8.6e-07 57.4 74 43.2
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 8.6e-07 57.4 74 41.9
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 1.1e-06 57.0 74 43.2
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.1e-06 57.0 74 43.2
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 1.1e-06 57.0 74 43.2
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 1.1e-06 57.0 74 43.2
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 1.1e-06 57.0 74 43.2
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 1.1e-06 57.0 74 43.2
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 1.1e-06 57.0 74 43.2
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 1.5e-06 56.6 64 48.4
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 1.5e-06 56.6 54 55.6
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 1.9e-06 56.2 74 43.2
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 1.9e-06 56.2 74 40.5
SHI34965 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-06 56.2 26 92.3
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 43.2
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 41.9
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 41.9
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 41.9
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 41.9
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 41.9
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 41.9
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 40.5
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 2.5e-06 55.8 27 88.9
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 41.9
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 2.5e-06 55.8 74 41.9
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 39.2
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 41.9
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 41.9
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 41.9
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 40.5
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 40.5
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 41.9
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 41.9
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 41.9
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 3.3e-06 55.5 74 41.9
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 43.2
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 41.9
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 41.9
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 40.5
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 4.3e-06 55.1 75 42.7
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 4.3e-06 55.1 75 42.7
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 4.3e-06 55.1 75 42.7
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 4.3e-06 55.1 75 42.7
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 4.3e-06 55.1 75 42.7
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 41.9
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 43.2
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 43.2
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 43.2
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 41.9
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 41.9
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 40.5
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 4.3e-06 55.1 74 41.9
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 5.6e-06 54.7 74 40.5
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 5.6e-06 54.7 74 43.2
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 5.6e-06 54.7 74 40.5
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 7.3e-06 54.3 74 40.5
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 7.3e-06 54.3 74 40.5
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 7.3e-06 54.3 74 39.2
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 7.3e-06 54.3 74 39.2
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 9.5e-06 53.9 74 40.5
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 9.5e-06 53.9 64 43.8


User provided reference genes

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