Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI35478 Sapria himalayana HOM05D006604 ORTHO05D007974 2.4e-81 305.4 155 100.0
SHI35759 Sapria himalayana HOM05D006604 ORTHO05D007974 1.1e-65 253.4 141 93.6
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-61 238.8 124 96.8
SHI35295 Sapria himalayana HOM05D006604 ORTHO05D007974 9.2e-57 223.8 116 97.4
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 2.1e-48 196.1 111 89.2
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 9.6e-46 187.2 104 92.3
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 5.3e-44 181.4 105 86.7
DCAR_031658 Daucus carota HOM05D006604 ORTHO05D007974 9.0e-44 180.6 111 83.8
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 2.0e-43 179.5 104 88.5
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 1.7e-42 176.4 108 82.4
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 3.8e-42 175.3 104 85.6
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 1.1e-41 173.7 113 80.5
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 1.1e-41 173.7 104 84.6
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 1.9e-41 172.9 108 81.5
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 2.4e-41 172.6 120 75.8
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 2.4e-41 172.6 104 84.6
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 7.8e-40 167.5 91 92.3
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 2.3e-39 166.0 108 76.9
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 2.3e-39 166.0 108 76.9
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 2.3e-39 166.0 108 76.9
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 2.3e-39 166.0 108 76.9
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 2.3e-39 166.0 108 76.9
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 2.3e-39 166.0 108 76.9
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 2.3e-39 166.0 104 80.8
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 6.6e-39 164.5 136 65.4
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 8.7e-39 164.1 104 79.8
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 8.7e-39 164.1 104 79.8
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 8.7e-39 164.1 104 79.8
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 8.7e-39 164.1 104 79.8
unitig_87.g28014 Utricularia gibba HOM05D006604 ORTHO05D007974 8.7e-39 164.1 114 75.4
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 2.1e-37 159.5 91 89.0
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 4.8e-37 158.3 139 65.5
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 6.2e-37 157.9 91 87.9
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 6.2e-37 157.9 91 87.9
BolC1t03444H Brassica oleracea HOM05D006604 ORTHO05D007974 1.8e-36 156.4 97 79.4
arahy.Tifrunner.gnm1.ann1.I4ZC3D Arachis hypogaea HOM05D006604 ORTHO05D007974 5.3e-36 154.8 106 73.6
arahy.Tifrunner.gnm1.ann1.NC5V37 Arachis hypogaea HOM05D006604 ORTHO05D007974 5.3e-36 154.8 106 73.6
Lj2P1232T107 Lonicera japonica HOM05D006604 ORTHO05D007974 6.9e-36 154.5 91 86.8
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 2.0e-35 152.9 116 65.5
GSVIVG01023423001 Vitis vinifera HOM05D006604 ORTHO05D007974 4.5e-35 151.8 89 86.5
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 5.8e-35 151.4 115 70.4
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 5.8e-35 151.4 115 70.4
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 7.6e-35 151.0 91 84.6
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 7.6e-35 151.0 117 70.9
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 2.2e-34 149.4 91 83.5
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 3.2e-33 145.6 75 97.3
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 9.3e-33 144.1 75 96.0
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 9.3e-33 144.1 75 96.0
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 1.2e-32 143.7 106 70.8
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.2e-32 143.7 103 73.8
Nitab4.5_0002404g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.8e-31 139.8 107 70.1
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 1.5e-30 136.7 91 78.0
SHI51349 Sapria himalayana HOM05D006604 ORTHO05D007974 2.5e-30 136.0 71 93.0
Aa31csc464G30 Aethionema arabicum HOM05D006604 ORTHO05D007974 1.6e-29 133.3 102 67.6
ClCG00G004290 Citrullus lanatus HOM05D006604 ORTHO05D007974 4.8e-29 131.7 75 89.3
Os12g0424180 Oryza sativa ssp. japonica HOM05D006604 ORTHO05D007974 9.0e-28 127.5 105 66.7
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 2.6e-27 125.9 75 85.3
SHI33922 Sapria himalayana HOM05D006604 ORTHO05D007974 4.5e-27 125.2 90 72.2
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 1.4e-25 120.2 71 85.9
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.9e-25 119.8 95 66.3
C01p34770 Brassica napus HOM05D013555 ORTHO05D016062 3.5e-24 115.5 72 77.8
C01p34870 Brassica napus HOM05D013555 ORTHO05D016062 7.9e-24 114.4 71 78.9
EL10Ac2g04656 Beta vulgaris HOM05D001314 ORTHO05D001165 2.5e-22 109.4 69 78.3
SHI37140 Sapria himalayana HOM05D006604 ORTHO05D007974 3.3e-22 109.0 53 96.2
Nitab4.5_0002418g0200 Nicotiana tabacum HOM05D006604 ORTHO05D007974 4.3e-22 108.6 67 80.6
Nn6g31985 Nelumbo nucifera HOM05D006604 ORTHO05D007974 2.1e-21 106.3 63 87.3
SHI35935 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-21 105.9 90 66.7
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 4.8e-21 105.1 75 74.7
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 1.4e-20 103.6 84 61.9
Glyma.01G103450 Glycine max HOM05D006604 ORTHO05D007974 6.9e-20 101.3 74 74.3
MELO3C034885.2 Cucumis melo HOM05D006604 ORTHO05D007974 7.6e-19 97.8 60 80.0
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 7.6e-19 97.8 60 81.7
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 2.5e-17 92.8 44 97.7
SHI36463 Sapria himalayana HOM05D006604 ORTHO05D007974 1.2e-16 90.5 45 95.6
Nitab4.5_0005246g0050 Nicotiana tabacum HOM05D006604 ORTHO05D007974 8.2e-13 77.8 96 49.0
SHI01303 Sapria himalayana HOM05D006604 ORTHO05D007974 1.4e-12 77.0 57 73.7
SHI27524 Sapria himalayana HOM05D006604 ORTHO05D007974 5.3e-12 75.1 69 59.4
Medtr0082s0160 Medicago truncatula HOM05D005794 ORTHO05D006814 1.2e-11 73.9 46 78.3
Medtr8g077470 Medicago truncatula HOM05D006604 ORTHO05D007974 5.9e-11 71.6 54 66.7
SHI42030 Sapria himalayana HOM05D006604 ORTHO05D007974 3.8e-10 68.9 36 94.4
SHI12109 Sapria himalayana HOM05D006604 ORTHO05D007974 1.4e-09 67.0 47 72.3
Eucgr.D01303 Eucalyptus grandis HOM05D006604 ORTHO05D007974 5.5e-09 65.1 40 75.0
SHI12053 Sapria himalayana HOM05D006604 ORTHO05D007974 1.4e-07 60.5 42 76.2
CARHR288260 Cardamine hirsuta HOM05D006604 ORTHO05D007974 6.7e-07 58.2 50 60.0
SHI36366 Sapria himalayana HOM05D006604 ORTHO05D007974 6.7e-07 58.2 32 93.8
MELO3C000965.2 Cucumis melo HOM05D006604 ORTHO05D007974 4.3e-06 55.5 33 84.8
Eucgr.L00375 Eucalyptus grandis HOM05D000743 ORTHO05D000580 5.7e-06 55.1 35 80.0


User provided reference genes

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