Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-61 237.7 111 100.0
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-20 102.8 52 92.3
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-20 101.7 58 84.5
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-19 100.1 58 82.8
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-19 99.8 58 82.8
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-19 99.4 56 85.7
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-19 99.4 56 85.7
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-19 99.0 56 85.7
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 2.5e-19 99.0 58 82.8
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-19 99.0 58 82.8
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-19 98.6 58 81.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-19 98.6 58 81.0
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-19 98.2 58 81.0
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 4.2e-19 98.2 58 81.0
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-19 98.2 58 81.0
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-18 96.7 55 83.6
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-18 96.7 55 80.0
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-18 96.7 55 83.6
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-18 95.9 56 82.1
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-18 95.9 56 82.1
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-18 95.5 58 79.3
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-18 95.5 58 79.3
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 4.6e-18 94.7 58 77.6
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 4.6e-18 94.7 56 82.1
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-18 94.4 56 80.4
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-18 94.4 58 77.6
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-18 94.4 58 77.6
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-17 93.6 58 77.6
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-17 93.6 55 83.6
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.3e-17 93.2 58 77.6
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-17 93.2 56 80.4
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-17 92.8 53 83.0
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-17 92.8 53 83.0
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 1.8e-17 92.8 58 77.6
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-17 92.4 58 77.6
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 3.0e-17 92.0 58 77.6
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 3.9e-17 91.7 58 75.9
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 3.9e-17 91.7 58 75.9
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 3.9e-17 91.7 58 75.9
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 3.9e-17 91.7 58 75.9
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-17 91.7 52 82.7
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-17 91.7 55 78.2
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 5.1e-17 91.3 58 75.9
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 5.1e-17 91.3 58 75.9
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 5.1e-17 91.3 58 75.9
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 5.1e-17 91.3 58 75.9
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 5.1e-17 91.3 58 75.9
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 6.7e-17 90.9 58 75.9
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 6.7e-17 90.9 58 75.9
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 6.7e-17 90.9 52 84.6
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 6.7e-17 90.9 52 84.6
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-17 90.9 58 77.6
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-16 90.1 58 75.9
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.5e-16 89.7 58 75.9
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.5e-16 89.7 58 72.4
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.9e-16 89.4 56 76.8
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.9e-16 89.4 56 76.8
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 1.9e-16 89.4 56 76.8
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 1.9e-16 89.4 56 76.8
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-16 89.4 55 78.2
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-16 89.4 52 80.8
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 2.5e-16 89.0 58 75.9
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 2.5e-16 89.0 58 75.9
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 4.3e-16 88.2 56 78.6
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 5.7e-16 87.8 56 75.0
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 9.7e-16 87.0 58 72.4
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 9.7e-16 87.0 56 76.8
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 1.3e-15 86.7 56 75.0
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-15 86.7 56 73.2
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 2.2e-15 85.9 55 74.5
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.2e-15 85.9 58 70.7
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-15 85.9 52 80.8
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.2e-15 85.9 58 72.4
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.7e-15 85.1 55 72.7
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.7e-15 85.1 55 72.7
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.7e-15 85.1 55 72.7
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 3.7e-15 85.1 55 72.7
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-15 84.7 50 82.0
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-15 84.7 45 88.9
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-15 84.3 58 72.4
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 8.2e-15 84.0 52 76.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 8.2e-15 84.0 52 76.9
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 8.2e-15 84.0 52 76.9
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 8.2e-15 84.0 52 76.9
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 8.2e-15 84.0 52 76.9
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 1.1e-14 83.6 54 74.1
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-14 82.8 52 76.9
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.9e-14 80.9 49 73.5
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.0e-12 77.0 64 62.5
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.7e-12 76.3 47 76.6
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-12 75.1 37 89.2
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.1e-11 73.6 44 79.5
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 9.4e-11 70.5 52 61.5
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 1.2e-10 70.1 42 78.6
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-10 69.7 35 91.4
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-10 69.7 35 91.4
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 6.7e-09 64.3 52 55.8
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-07 59.3 34 85.3
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-07 58.5 29 86.2
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 8.2e-07 57.4 41 65.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 4.1e-06 55.1 30 83.3
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-06 54.7 43 65.1
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 9.1e-06 53.9 30 80.0


User provided reference genes

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