Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-133 476.9 226 100.0
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-95 352.4 182 92.3
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-86 323.6 174 88.5
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-86 321.2 170 90.6
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-85 318.2 166 90.4
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.3e-83 313.5 166 90.4
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-83 312.0 163 91.4
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 8.4e-83 310.8 177 84.2
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 8.4e-83 310.8 177 84.2
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 8.4e-83 310.8 177 84.2
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 8.4e-83 310.8 177 84.2
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.9e-82 309.7 177 83.6
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.9e-82 309.7 177 83.6
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 4.2e-82 308.5 178 82.6
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 5.4e-82 308.1 177 83.6
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 1.2e-81 307.0 178 82.0
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.1e-81 306.2 177 83.6
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 3.5e-81 305.4 170 85.9
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 4.6e-81 305.1 170 85.9
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.7e-80 303.1 177 82.5
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.7e-80 303.1 177 81.9
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-80 302.0 169 86.4
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.1e-80 301.6 170 85.3
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 6.6e-80 301.2 177 81.9
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 6.6e-80 301.2 177 81.9
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 8.7e-80 300.8 167 85.6
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 8.7e-80 300.8 177 81.9
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.5e-79 300.1 177 81.9
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.5e-79 300.1 177 81.4
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 1.9e-79 299.7 177 81.9
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 1.9e-79 299.7 177 81.9
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 1.9e-79 299.7 177 81.9
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 4.3e-79 298.5 177 81.4
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 5.6e-79 298.1 177 81.9
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 9.6e-79 297.4 177 81.4
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 9.6e-79 297.4 177 81.4
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 1.3e-78 297.0 170 83.5
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 1.3e-78 297.0 170 83.5
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 2.1e-78 296.2 170 84.1
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 2.8e-78 295.8 170 83.5
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 3.6e-78 295.4 175 81.7
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-78 294.7 164 87.2
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 8.1e-78 294.3 177 80.8
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 8.1e-78 294.3 177 80.8
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-77 293.9 174 81.0
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-77 293.9 174 81.0
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.4e-77 293.5 170 83.5
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.4e-77 293.5 170 83.5
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.5e-76 290.0 177 79.1
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 2.0e-76 289.7 168 83.3
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 3.4e-76 288.9 165 84.2
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 3.4e-76 288.9 170 82.4
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 7.6e-76 287.7 165 82.4
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 7.6e-76 287.7 165 82.4
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-76 287.7 145 94.5
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 1.3e-75 287.0 168 82.7
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 1.3e-75 287.0 178 79.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.3e-75 287.0 177 80.2
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 6.4e-75 284.6 170 81.2
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-74 283.9 168 81.5
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.4e-74 283.5 174 79.3
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 1.0e-72 277.3 170 79.4
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.7e-72 276.6 169 79.9
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 1.7e-72 276.6 177 76.8
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-71 273.9 192 71.9
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-70 269.2 150 87.3
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-69 265.0 139 91.4
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 4.5e-68 261.9 152 82.2
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-67 260.4 174 73.6
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-67 257.7 136 89.7
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-66 256.1 150 83.3
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-65 251.5 139 87.1
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-65 251.5 139 87.1
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 7.9e-65 251.1 151 80.8
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-64 250.0 148 81.8
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-64 249.6 133 88.7
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 3.9e-64 248.8 167 75.4
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 3.9e-64 248.8 170 72.4
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.9e-64 248.8 141 85.1
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.9e-64 248.8 141 85.1
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.9e-63 246.5 171 70.8
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 9.6e-63 244.2 153 78.4
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-62 242.3 131 87.8
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.8e-61 240.0 135 85.2
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 3.4e-60 235.7 177 68.4
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-60 235.0 137 83.9
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-59 233.0 139 84.9
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 7.9e-57 224.6 179 65.9
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 7.9e-57 224.6 137 82.5
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 4.3e-55 218.8 141 78.7
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-53 211.8 114 87.7
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 9.0e-53 211.1 130 80.0
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 3.4e-52 209.1 172 65.7
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-51 207.6 100 96.0
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-48 196.4 112 85.7
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.1e-47 194.1 147 67.3
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 9.7e-47 191.0 105 86.7
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 4.8e-46 188.7 109 83.5
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 3.1e-45 186.0 100 87.0
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 4.5e-44 182.2 99 86.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 5.9e-44 181.8 111 80.2
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 1.7e-43 180.3 97 86.6
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 5.0e-43 178.7 149 55.0
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 6.5e-43 178.3 132 69.7
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-43 178.3 94 89.4
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-42 176.8 174 56.9
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 3.2e-42 176.0 103 81.6
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 2.1e-41 173.3 132 68.9
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 3.6e-41 172.6 153 52.9
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 7.9e-41 171.4 99 81.8
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.8e-40 170.2 107 75.7
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 3.0e-40 169.5 122 69.7
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-39 166.4 87 86.2
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-39 166.4 87 86.2
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-39 166.0 147 60.5
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.7e-38 163.7 134 63.4
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.3e-38 161.8 109 72.5
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 4.1e-37 159.1 136 62.5
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 1.2e-36 157.5 120 68.3
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-36 156.0 74 95.9
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 4.5e-36 155.6 80 87.5
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-35 154.1 80 88.8
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-35 154.1 74 93.2
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 8.5e-35 151.4 96 76.0
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-34 149.4 74 91.9
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-34 147.9 74 91.9
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 7.9e-33 144.8 74 89.2
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-32 143.7 72 91.7
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-32 143.3 81 86.4
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-32 142.5 74 89.2
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-32 141.4 74 89.2
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-31 141.0 71 91.5
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 2.0e-31 140.2 171 47.4
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-31 139.8 72 88.9
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-30 137.5 70 90.0
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.7e-30 137.1 98 68.4
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.2e-30 136.7 146 52.7
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 2.8e-30 136.3 74 83.8
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-30 135.6 137 56.9
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-30 135.6 137 56.9
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 6.3e-30 135.2 74 85.1
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 6.3e-30 135.2 74 85.1
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-30 134.8 74 86.5
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 2.4e-29 133.3 74 85.1
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 2.4e-29 133.3 74 85.1
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 2.4e-29 133.3 74 85.1
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 2.4e-29 133.3 74 85.1
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.6e-28 130.6 72 81.9
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-28 129.4 74 83.8
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 1.0e-27 127.9 71 83.1
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.9e-27 126.3 129 52.7
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.6e-25 120.6 74 75.7
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 4.7e-25 119.0 143 44.1
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 4.4e-23 112.5 64 84.4
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 2.7e-20 103.2 64 75.0
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-19 100.1 60 83.3
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.9e-18 97.1 57 77.2
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-18 96.7 46 93.5
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.2e-17 94.4 69 69.6
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-17 94.0 58 77.6
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 4.7e-17 92.4 54 77.8
SHI41650 Sapria himalayana HOM05D000743 ORTHO05D000580 6.1e-17 92.0 45 95.6
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 2.6e-15 86.7 58 77.6
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-15 86.7 112 46.4
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 9.8e-15 84.7 50 76.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-13 79.3 48 77.1
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 9.1e-13 78.2 101 49.5
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.7e-12 75.1 44 77.3
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.9e-11 73.2 50 70.0
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 1.9e-10 70.5 43 74.4
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-09 65.9 34 88.2
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 3.4e-07 59.7 59 49.2
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 7.5e-07 58.5 29 89.7
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.2e-06 57.0 43 65.1
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 2.2e-06 57.0 30 83.3
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-06 56.2 34 79.4


User provided reference genes

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