Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 6.6e-287 989.9 479 100.0
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 1.4e-140 503.8 629 49.6
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 5.4e-140 501.9 662 47.7
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 4.6e-139 498.8 659 48.0
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 2.3e-138 496.5 659 47.8
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 2.3e-138 496.5 659 47.8
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 2.3e-138 496.5 659 47.8
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 2.3e-138 496.5 659 47.8
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 2.3e-138 496.5 659 47.8
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 5.6e-137 491.9 659 47.8
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 2.8e-136 489.6 659 47.5
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 3.6e-136 489.2 659 47.3
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 4.0e-135 485.7 659 47.5
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 3.8e-133 479.2 658 47.3
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 8.4e-133 478.0 658 47.0
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 1.2e-131 474.2 659 46.7
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 1.2e-131 474.2 659 46.7
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 1.2e-131 474.2 659 46.7
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 6.6e-130 468.4 659 46.7
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 3.3e-129 466.1 659 46.6
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 3.3e-129 466.1 659 46.6
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 8.1e-128 461.5 659 46.3
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 1.8e-127 460.3 659 45.8
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.7e-125 453.8 611 48.0
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 3.2e-124 449.5 606 48.0
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.0e-122 444.5 595 47.2
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 2.3e-122 443.4 549 50.1
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 3.0e-122 443.0 631 46.0
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 1.3e-120 437.6 635 46.0
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 8.1e-120 434.9 583 47.2
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 1.4e-119 434.1 583 47.5
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 2.4e-119 433.3 549 49.4
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 6.9e-119 431.8 583 47.3
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 6.9e-119 431.8 583 47.3
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 6.9e-119 431.8 583 47.3
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.2e-118 431.0 622 45.8
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 2.0e-118 430.3 583 47.3
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 2.5e-116 423.3 583 46.8
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 3.0e-114 416.4 505 51.5
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 3.7e-112 409.5 552 47.8
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 3.7e-112 409.5 523 48.9
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 1.1e-111 407.9 567 47.1
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.1e-111 406.0 525 48.2
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 7.6e-110 401.7 632 42.2
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 1.0e-106 391.3 415 54.2
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 2.3e-106 390.2 657 41.4
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 5.3e-103 379.0 558 45.5
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 5.3e-103 379.0 530 47.0
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 3.6e-99 366.3 502 46.8
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.6e-99 365.9 421 50.8
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.8e-98 364.0 278 70.1
Ah.01g011750 Amaranthus hybridus HOM05D004537 ORTHO05D005492 6.7e-98 362.1 521 45.1
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.5e-97 360.9 277 69.7
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 6.3e-96 355.5 455 48.6
SHI26645 Sapria himalayana HOM05D004537 ORTHO05D005492 3.1e-95 353.2 449 48.6
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 5.9e-94 349.0 537 44.1
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 5.9e-94 349.0 537 44.1
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 5.0e-93 345.9 539 44.3
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 1.9e-92 344.0 442 49.3
Ah.14g079610 Amaranthus hybridus HOM05D004537 ORTHO05D005492 7.5e-81 305.4 247 66.0
COL.COLO4_04173 Corchorus olitorius HOM05D004537 ORTHO05D005492 1.1e-79 301.6 496 42.3
Pp3c4_28940 Physcomitrium patens HOM05D004537 ORTHO05D005492 2.7e-78 297.0 274 60.6
Pp3c4_28946 Physcomitrium patens HOM05D004537 ORTHO05D005492 2.7e-78 297.0 274 60.6
unitig_87.g28000 Utricularia gibba HOM05D004537 ORTHO05D005492 1.3e-77 294.7 248 64.9
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 1.5e-76 291.2 499 42.1
HanXRQChr08g0236111 Helianthus annuus HOM05D004537 ORTHO05D005492 4.7e-75 286.2 248 63.7
Psat0s12108g0080 Pisum sativum HOM05D004537 ORTHO05D005492 2.2e-72 277.3 248 62.9
SGA_v2.0_scaffold400G50927 Striga asiatica HOM05D004537 ORTHO05D005492 4.0e-66 256.5 343 49.3
Nitab4.5_0000019g0180 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.8e-63 247.7 388 42.5
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 8.6e-61 238.8 431 40.4
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.1e-59 234.2 235 57.9
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 2.6e-57 227.3 374 42.5
RcHm_v2.0_MTg0498781 Rosa chinensis HOM05D004537 ORTHO05D005492 2.6e-57 227.3 169 68.6
Solyc08g029280.2 Solanum lycopersicum HOM05D004537 ORTHO05D005492 9.8e-57 225.3 228 55.7
Nn003s41396 Nelumbo nucifera HOM05D004537 ORTHO05D005492 8.3e-56 222.2 169 68.6
Nn1g09964 Nelumbo nucifera HOM05D004537 ORTHO05D005492 8.3e-56 222.2 169 68.6
Nn1g10125 Nelumbo nucifera HOM05D004537 ORTHO05D005492 8.3e-56 222.2 169 68.6
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.6e-54 218.0 384 40.4
HanXRQChr04g0127211 Helianthus annuus HOM05D004537 ORTHO05D005492 5.0e-53 213.0 181 62.4
BraSC48t46324Z Brassica rapa HOM05D004537 ORTHO05D005492 4.3e-52 209.9 174 67.2
Nitab4.5_0000866g0210 Nicotiana tabacum HOM05D004537 ORTHO05D005492 2.3e-50 204.1 393 39.7
SHI27475 Sapria himalayana HOM05D004537 ORTHO05D005492 2.3e-50 204.1 147 70.1
CAN.G416.37 Capsicum annuum HOM05D004537 ORTHO05D005492 4.1e-47 193.4 175 60.0
Haze_27145 Corylus avellana HOM05D004537 ORTHO05D005492 8.1e-43 179.1 459 34.4
SHI36146 Sapria himalayana HOM05D004537 ORTHO05D005492 2.3e-42 177.6 86 91.9
SHI26667 Sapria himalayana HOM05D004537 ORTHO05D005492 3.1e-42 177.2 190 57.9
Nitab4.5_0000592g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.0e-42 176.8 408 36.5
CARHR288190 Cardamine hirsuta HOM05D004537 ORTHO05D005492 9.8e-41 172.2 92 85.9
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 9.8e-41 172.2 546 30.6
SalBow1G2743 Salvia bowleyana HOM05D004537 ORTHO05D005492 1.7e-40 171.4 273 39.2
CAN.G61.11 Capsicum annuum HOM05D004537 ORTHO05D005492 2.7e-38 164.1 145 58.6
SHI26666 Sapria himalayana HOM05D004537 ORTHO05D005492 2.7e-38 164.1 201 48.8
Aa31csc464G10 Aethionema arabicum HOM05D004537 ORTHO05D005492 7.8e-38 162.5 85 87.1
Lalb_Chr11g0071071 Lupinus albus HOM05D004537 ORTHO05D005492 1.5e-36 158.3 251 41.4
Migut.E01634 Erythranthe guttata HOM05D004537 ORTHO05D005492 4.3e-36 156.8 81 93.8
Migut.E00896 Erythranthe guttata HOM05D004537 ORTHO05D005492 2.8e-35 154.1 81 92.6
RcHm_v2.0_MTg0498791 Rosa chinensis HOM05D004537 ORTHO05D005492 1.1e-34 152.1 235 43.8
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 4.0e-34 150.2 227 44.9
HanXRQChr04g0127221 Helianthus annuus HOM05D004537 ORTHO05D005492 6.8e-34 149.4 350 35.7
AUR62044038 Chenopodium quinoa HOM05D004537 ORTHO05D005492 4.4e-33 146.7 528 27.5
Lsat_1_v5_gn_8_134521 Lactuca sativa HOM05D004537 ORTHO05D005492 1.3e-32 145.2 94 71.3
Haze_27101 Corylus avellana HOM05D004537 ORTHO05D005492 6.4e-32 142.9 280 33.2
TPR.G4012 Trifolium pratense HOM05D004537 ORTHO05D005492 1.9e-31 141.4 161 53.4
MELO3C021523.2 Cucumis melo HOM05D004537 ORTHO05D005492 5.4e-31 139.8 136 60.3
BraSC48t46325Z Brassica rapa HOM05D004537 ORTHO05D005492 4.6e-30 136.7 186 48.9
Lsat_1_v5_gn_4_114400 Lactuca sativa HOM05D004537 ORTHO05D005492 4.6e-30 136.7 85 76.5
SHI27477 Sapria himalayana HOM05D004537 ORTHO05D005492 6.0e-30 136.3 172 51.2
SalBow8G0065 Salvia bowleyana HOM05D047022 ORTHO05D005492 1.7e-29 134.8 148 50.7
SHI27476 Sapria himalayana HOM05D004537 ORTHO05D005492 1.5e-28 131.7 82 79.3
CAN.G60.10 Capsicum annuum HOM05D004537 ORTHO05D005492 8.9e-26 122.5 78 82.1
SHI20135 Sapria himalayana HOM05D004537 ORTHO05D005492 1.5e-25 121.7 156 44.9
MELO3C027747.2 Cucumis melo HOM05D004537 ORTHO05D005492 9.9e-25 119.0 107 62.6
Medtr8g106255 Medicago truncatula HOM05D004537 ORTHO05D005492 9.9e-25 119.0 228 36.8
CAN.G999.40 Capsicum annuum HOM05D004537 ORTHO05D005492 2.2e-24 117.9 70 84.3
PGR071G0006 Punica granatum HOM05D004537 ORTHO05D005492 1.9e-23 114.8 105 59.0
TAR022G0004 Trochodendron aralioides HOM05D004537 ORTHO05D005492 2.1e-22 111.3 125 48.0
SHI01747 Sapria himalayana HOM05D004537 ORTHO05D005492 1.3e-21 108.6 165 46.7
Mapoly0006s0021 Marchantia polymorpha HOM05D004537 ORTHO05D005492 3.9e-21 107.1 56 91.1
Ah.10g027900 Amaranthus hybridus HOM05D004537 ORTHO05D005492 4.3e-20 103.6 131 47.3
Ah.10g028280 Amaranthus hybridus HOM05D004537 ORTHO05D005492 4.3e-20 103.6 131 47.3
HanXRQChr05g0159721 Helianthus annuus HOM05D004537 ORTHO05D005492 5.6e-20 103.2 109 54.1
SalBow8G1414 Salvia bowleyana HOM05D047022 ORTHO05D005492 1.3e-19 102.1 88 62.5
Solyc02g021770.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 8.1e-19 99.4 148 45.3
Glyma.03G094400 Glycine max HOM05D004537 ORTHO05D005492 6.9e-18 96.3 218 33.9
CAN.G1103.8 Capsicum annuum HOM05D004537 ORTHO05D005492 9.0e-18 95.9 53 79.2
SMO053G0009 Selaginella moellendorffii HOM05D004537 ORTHO05D005492 1.2e-17 95.5 217 35.9
Haze_27411 Corylus avellana HOM05D004537 ORTHO05D005492 9.9e-17 92.4 155 40.0
Nitab4.5_0000074g0200 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.7e-16 91.7 100 50.0
GSVIVG01020676001 Vitis vinifera HOM05D004537 ORTHO05D005492 3.8e-16 90.5 59 78.0
ClCG09G001530 Citrullus lanatus HOM05D004537 ORTHO05D005492 1.4e-15 88.6 52 86.5
HPP92_007209 Vanilla planifolia HOM05D004537 ORTHO05D005492 2.1e-14 84.7 92 53.3
SHI20134 Sapria himalayana HOM05D004537 ORTHO05D005492 2.7e-14 84.3 50 82.0
CAN.G889.6 Capsicum annuum HOM05D004537 ORTHO05D005492 3.5e-14 84.0 86 55.8
Eucgr.E01613 Eucalyptus grandis HOM05D004537 ORTHO05D005492 1.3e-13 82.0 86 57.0
Lalb_Chr00c21g0405811 Lupinus albus HOM05D004537 ORTHO05D005492 3.0e-13 80.9 39 94.9
EL10Ac5g12760 Beta vulgaris HOM05D004537 ORTHO05D005492 3.9e-13 80.5 56 75.0
MD13G1127000 Malus domestica HOM05D004537 ORTHO05D005492 5.1e-13 80.1 322 30.7
SHI30018 Sapria himalayana HOM05D004537 ORTHO05D005492 1.5e-12 78.6 55 67.3
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.3e-11 75.5 78 55.1
Medtr0024s0110 Medicago truncatula HOM05D004537 ORTHO05D005492 3.6e-11 73.9 92 51.1
SHI20133 Sapria himalayana HOM05D004537 ORTHO05D005492 3.6e-11 73.9 52 67.3
Nitab4.5_0001127g0350 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.8e-11 73.6 38 89.5
GSVIVG01012277001 Vitis vinifera HOM05D004537 ORTHO05D005492 4.8e-11 73.6 138 36.2
Ah.03g142980 Amaranthus hybridus HOM05D001159 ORTHO05D005492 6.2e-11 73.2 43 86.0
Lalb_Chr20g0115011 Lupinus albus HOM05D004537 ORTHO05D005492 1.1e-10 72.4 90 50.0
ATR1125G006 Amborella trichopoda HOM05D004537 ORTHO05D005492 5.3e-10 70.1 32 96.9
BolC4t24790H Brassica oleracea HOM05D004537 ORTHO05D005492 1.5e-09 68.6 48 68.8
TPR.G39033 Trifolium pratense HOM05D004537 ORTHO05D005492 7.6e-09 66.2 39 79.5
TPR.G9938 Trifolium pratense HOM05D004537 ORTHO05D005492 1.4e-07 62.0 46 65.2
CAN.G505.7 Capsicum annuum HOM05D004537 ORTHO05D005492 2.4e-07 61.2 125 38.4
C04p32420 Brassica napus HOM05D004537 ORTHO05D005492 1.6e-06 58.5 31 83.9


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