Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 1.7e-64 249.2 129 100.0
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 1.1e-42 176.8 142 69.0
SHI35501 Sapria himalayana HOM05D004479 ORTHO05D005597 8.0e-30 134.0 73 91.8
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 5.2e-29 131.3 115 67.8
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 3.8e-24 115.2 123 54.5
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 2.8e-22 109.0 88 67.0
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 2.2e-19 99.4 78 67.9
SHI37143 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-19 98.6 81 70.4
SHI38762 Sapria himalayana HOM05D023003 ORTHO05D005597 2.1e-14 82.8 66 74.2
SHI37442 Sapria himalayana HOM05D023003 ORTHO05D005597 5.8e-12 74.7 66 66.7
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 7.5e-12 74.3 110 43.6
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 1.3e-11 73.6 107 43.0
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 1.7e-11 73.2 121 39.7
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 2.2e-11 72.8 257 28.8
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 2.9e-11 72.4 256 28.5
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 2.9e-11 72.4 107 44.9
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 3.7e-11 72.0 254 28.7
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 4.9e-11 71.6 110 41.8
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 8.3e-11 70.9 116 41.4
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 8.3e-11 70.9 119 39.5
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 8.3e-11 70.9 119 39.5
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 1.4e-10 70.1 255 28.2
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 1.4e-10 70.1 107 43.0
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 1.9e-10 69.7 119 38.7
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 1.9e-10 69.7 255 28.2
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 1.9e-10 69.7 119 38.7
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.9e-10 69.7 119 38.7
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 2.4e-10 69.3 152 35.5
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 2.4e-10 69.3 119 38.7
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 3.2e-10 68.9 256 28.1
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 3.2e-10 68.9 252 28.2
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 3.2e-10 68.9 252 28.2
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 3.2e-10 68.9 110 40.9
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 4.1e-10 68.6 252 28.6
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 4.1e-10 68.6 107 43.9
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 5.4e-10 68.2 110 40.9
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 5.4e-10 68.2 119 38.7
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 5.4e-10 68.2 255 27.8
SHI36674 Sapria himalayana HOM05D023003 ORTHO05D365753 5.4e-10 68.2 40 87.5
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 7.0e-10 67.8 107 42.1
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 7.0e-10 67.8 110 40.0
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 9.2e-10 67.4 119 38.7
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 9.2e-10 67.4 251 28.7
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.2e-09 67.0 107 43.0
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 1.2e-09 67.0 107 43.0
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 1.6e-09 66.6 115 40.9
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 1.6e-09 66.6 49 69.4
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 1.6e-09 66.6 251 27.1
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 2.0e-09 66.2 252 27.8
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 2.7e-09 65.9 110 40.0
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 2.7e-09 65.9 110 40.0
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 2.7e-09 65.9 107 41.1
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 3.5e-09 65.5 107 40.2
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 3.5e-09 65.5 116 37.1
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 3.5e-09 65.5 254 28.0
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 3.5e-09 65.5 119 37.8
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 4.6e-09 65.1 118 37.3
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 4.6e-09 65.1 107 43.0
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 4.6e-09 65.1 107 40.2
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 6.0e-09 64.7 255 27.8
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 6.0e-09 64.7 255 27.8
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 6.0e-09 64.7 116 39.7
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 6.0e-09 64.7 253 27.3
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 6.0e-09 64.7 107 41.1
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 7.8e-09 64.3 107 42.1
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 7.8e-09 64.3 110 40.9
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.0e-08 63.9 107 40.2
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 1.0e-08 63.9 110 39.1
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 1.0e-08 63.9 109 39.4
SHI37441 Sapria himalayana HOM05D004479 ORTHO05D005597 1.0e-08 63.9 36 86.1
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 1.0e-08 63.9 118 37.3
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 1.3e-08 63.5 118 37.3
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 1.3e-08 63.5 107 40.2
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 1.7e-08 63.2 248 27.0
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 1.7e-08 63.2 110 39.1
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 1.7e-08 63.2 110 39.1
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 1.7e-08 63.2 115 39.1
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 3.9e-08 62.0 116 36.2
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 3.9e-08 62.0 107 39.3
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 3.9e-08 62.0 118 39.8
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 5.0e-08 61.6 115 37.4
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 6.6e-08 61.2 119 35.3
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 6.6e-08 61.2 127 37.0
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 6.6e-08 61.2 117 37.6
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 6.6e-08 61.2 107 38.3
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 8.6e-08 60.8 116 38.8
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 8.6e-08 60.8 126 36.5
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 1.1e-07 60.5 121 36.4
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 1.5e-07 60.1 116 37.1
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 1.9e-07 59.7 107 39.3
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 4.3e-07 58.5 107 36.4
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 7.3e-07 57.8 107 33.6
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 1.2e-06 57.0 148 33.8
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 1.6e-06 56.6 102 39.2
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 1.6e-06 56.6 110 34.5
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 2.1e-06 56.2 151 33.1
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 2.1e-06 56.2 107 36.4
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 2.8e-06 55.8 132 31.8
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 3.6e-06 55.5 107 36.4
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 4.7e-06 55.1 107 36.4
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 6.2e-06 54.7 107 35.5
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 6.2e-06 54.7 107 36.4
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 8.1e-06 54.3 107 36.4
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 8.1e-06 54.3 105 39.0
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 8.1e-06 54.3 105 39.0
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 8.1e-06 54.3 166 30.7


User provided reference genes

Program Settings