Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34965 Sapria himalayana HOM05D000849 ORTHO05D003989 1.3e-51 206.1 100 100.0
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 1.6e-33 146.0 76 92.1
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 4.6e-33 144.4 77 92.2
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 3.0e-32 141.7 76 89.5
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-31 139.8 80 87.5
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-31 139.8 80 87.5
SHI33029 Sapria himalayana HOM05D000849 ORTHO05D003989 1.3e-27 126.3 79 82.3
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 5.4e-26 120.9 73 83.6
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-25 119.8 73 82.2
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-25 119.8 73 82.2
SHI43632 Sapria himalayana HOM05D000558 ORTHO05D001857 1.1e-21 106.7 75 76.0
SHI20141 Sapria himalayana HOM05D000849 ORTHO05D003989 1.4e-21 106.3 86 65.1
SHI49175 Sapria himalayana HOM05D000849 ORTHO05D003989 1.3e-19 99.8 76 67.1
SHI35260 Sapria himalayana HOM05D000558 ORTHO05D001857 1.0e-16 90.1 46 93.5
SHI34978 Sapria himalayana HOM05D000849 ORTHO05D003989 4.5e-12 74.7 46 84.8
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 1.3e-11 73.2 81 49.4
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 4.9e-11 71.2 77 49.4
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 4.9e-11 71.2 77 49.4
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 4.9e-11 71.2 77 49.4
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 6.5e-11 70.9 77 48.1
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 6.5e-11 70.9 77 48.1
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 6.5e-11 70.9 77 48.1
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 6.5e-11 70.9 77 48.1
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 8.4e-11 70.5 76 50.0
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.1e-10 70.1 76 48.7
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 1.1e-10 70.1 77 49.4
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 1.1e-10 70.1 76 50.0
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 1.4e-10 69.7 76 50.0
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 1.4e-10 69.7 76 50.0
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 1.4e-10 69.7 76 50.0
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 1.4e-10 69.7 76 50.0
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 1.4e-10 69.7 76 50.0
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 48.7
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 1.9e-10 69.3 76 50.0
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 2.5e-10 68.9 71 52.1
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 2.5e-10 68.9 78 50.0
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 2.5e-10 68.9 76 48.7
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 2.5e-10 68.9 76 48.7
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 2.5e-10 68.9 76 48.7
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 2.5e-10 68.9 76 48.7
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 2.5e-10 68.9 76 48.7
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 2.5e-10 68.9 76 48.7
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 2.5e-10 68.9 76 50.0
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 3.2e-10 68.6 78 48.7
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 3.2e-10 68.6 76 48.7
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 3.2e-10 68.6 76 48.7
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 3.2e-10 68.6 76 47.4
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 3.2e-10 68.6 76 48.7
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 3.2e-10 68.6 76 47.4
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 4.2e-10 68.2 76 48.7
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 4.2e-10 68.2 76 48.7
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 4.2e-10 68.2 76 48.7
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 4.2e-10 68.2 78 47.4
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 4.2e-10 68.2 76 48.7
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 4.2e-10 68.2 76 46.1
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 4.2e-10 68.2 76 46.1
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 47.4
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 5.5e-10 67.8 78 48.7
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 5.5e-10 67.8 76 48.7
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 7.1e-10 67.4 76 48.7
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 9.3e-10 67.0 77 45.5
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 9.3e-10 67.0 76 48.7
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 47.4
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 47.4
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 44.7
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 1.2e-09 66.6 77 48.1
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 1.2e-09 66.6 77 48.1
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 1.2e-09 66.6 77 48.1
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 1.2e-09 66.6 77 48.1
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 1.2e-09 66.6 77 48.1
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 47.4
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 1.2e-09 66.6 77 46.8
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 47.4
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 46.1
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 47.4
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 47.4
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 1.2e-09 66.6 76 47.4
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 1.6e-09 66.2 76 47.4
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 1.6e-09 66.2 76 50.0
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 1.6e-09 66.2 77 45.5
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.6e-09 66.2 77 45.5
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 1.6e-09 66.2 76 50.0
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 1.6e-09 66.2 76 50.0
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 1.6e-09 66.2 76 50.0
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 1.6e-09 66.2 76 47.4
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 1.6e-09 66.2 76 50.0
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 1.6e-09 66.2 76 47.4
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 2.1e-09 65.9 76 47.4
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 2.1e-09 65.9 76 47.4
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 2.1e-09 65.9 76 46.1
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 2.1e-09 65.9 77 48.1
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 2.7e-09 65.5 32 87.5
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 2.7e-09 65.5 76 47.4
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 3.5e-09 65.1 76 47.4
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 3.5e-09 65.1 76 47.4
SHI52965 Sapria himalayana HOM05D000849 ORTHO05D003989 3.5e-09 65.1 46 71.7
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 3.5e-09 65.1 76 44.7
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 4.6e-09 64.7 60 53.3
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 4.6e-09 64.7 60 53.3
SHI35683 Sapria himalayana HOM05D000558 ORTHO05D001857 7.9e-09 63.9 65 58.5
Thhalv10002117m.g Eutrema salsugineum HOM05D000849 ORTHO05D003989 1.3e-08 63.2 59 52.5
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 1.8e-08 62.8 41 70.7
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 6.7e-08 60.8 32 81.2
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 8.7e-08 60.5 76 43.4
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-07 60.1 33 78.8
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 1.1e-07 60.1 76 42.1
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 1.5e-07 59.7 26 96.2
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 1.9e-07 59.3 78 42.3
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 3.3e-07 58.5 26 96.2
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 3.3e-07 58.5 26 96.2
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 4.3e-07 58.2 26 92.3
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 5.7e-07 57.8 76 42.1
SHI40091 Sapria himalayana HOM05D010923 ORTHO05D367824 7.4e-07 57.4 28 92.9
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 9.6e-07 57.0 47 61.7
SHI35822 Sapria himalayana HOM05D010923 ORTHO05D003989 1.3e-06 56.6 26 92.3
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 1.3e-06 56.6 26 92.3
SHI33597 Sapria himalayana HOM05D000849 ORTHO05D003989 1.6e-06 56.2 38 71.1
SHI35267 Sapria himalayana HOM05D000849 ORTHO05D001857 2.1e-06 55.8 24 95.8
Cre07.g330950 Chlamydomonas reinhardtii HOM05D000849 ORTHO05D003989 6.2e-06 54.3 76 42.1
SHI43352 Sapria himalayana HOM05D010923 ORTHO05D003989 6.2e-06 54.3 55 47.3


User provided reference genes

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