Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34938 Sapria himalayana HOM05D007924 ORTHO05D010328 6.6e-63 243.8 118 100.0
SHI38116 Sapria himalayana HOM05D007924 ORTHO05D010328 6.4e-18 94.4 74 68.9
PGR028G0018 Punica granatum HOM05D007924 ORTHO05D010328 1.8e-15 86.3 74 64.9
GSVIVG01000955001 Vitis vinifera HOM05D007924 ORTHO05D010328 8.7e-15 84.0 74 63.5
DCAR_032428 Daucus carota HOM05D007924 ORTHO05D010328 1.1e-14 83.6 74 63.5
HanXRQChr00c0055g0571411 Helianthus annuus HOM05D007924 ORTHO05D010328 1.5e-14 83.2 74 63.5
HanXRQMTg0579161 Helianthus annuus HOM05D007924 ORTHO05D010328 1.5e-14 83.2 74 63.5
HanXRQMTg0579521 Helianthus annuus HOM05D007924 ORTHO05D010328 1.5e-14 83.2 74 63.5
Nn1g10039 Nelumbo nucifera HOM05D007924 ORTHO05D010328 1.5e-14 83.2 74 63.5
Nn1g10153 Nelumbo nucifera HOM05D007924 ORTHO05D010328 1.5e-14 83.2 74 63.5
Oeu018666.1 Olea europaea HOM05D007924 ORTHO05D010328 1.5e-14 83.2 74 63.5
RcHm_v2.0_Chr6g0257961 Rosa chinensis HOM05D007924 ORTHO05D010328 2.5e-14 82.4 74 62.2
RcHm_v2.0_MTg0498901 Rosa chinensis HOM05D007924 ORTHO05D010328 2.5e-14 82.4 74 62.2
RcHm_v2.0_MTg0499211 Rosa chinensis HOM05D007924 ORTHO05D010328 2.5e-14 82.4 74 62.2
Lj2P1227T93 Lonicera japonica HOM05D007924 ORTHO05D010328 7.4e-14 80.9 74 62.2
LjContig00315g0007302 Lotus japonicus HOM05D007924 ORTHO05D010328 7.4e-14 80.9 74 60.8
TPR.G7050 Trifolium pratense HOM05D007924 ORTHO05D010328 7.4e-14 80.9 74 60.8
CANSAT16G0013 Cannabis sativa HOM05D007924 ORTHO05D010328 9.6e-14 80.5 74 59.5
Lalb_Chr00c24g0406701 Lupinus albus HOM05D007924 ORTHO05D010328 1.3e-13 80.1 74 60.8
Sed0020154 Sechium edule HOM05D007924 ORTHO05D010328 1.3e-13 80.1 74 60.8
HanXRQChr09g0250631 Helianthus annuus HOM05D007924 ORTHO05D010328 3.7e-13 78.6 73 61.6
PGSC0003DMG400011350 Solanum tuberosum HOM05D007924 ORTHO05D010328 3.7e-13 78.6 74 60.8
CSS0018158 Camellia sinensis var. sinensis HOM05D007924 ORTHO05D010328 1.1e-12 77.0 74 58.1
SGA_v2.0_scaffold575G53004 Striga asiatica HOM05D007924 ORTHO05D010328 1.1e-12 77.0 74 59.5
Nitab4.5_0003945g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.4e-12 76.6 74 59.5
CsaV3_UNG210380 Cucumis sativus L. HOM05D007924 ORTHO05D010328 1.8e-12 76.3 74 58.1
CAN.G1180.17 Capsicum annuum HOM05D007924 ORTHO05D010328 2.4e-12 75.9 74 59.5
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 4.0e-12 75.1 74 58.1
AT2G07707 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 6.9e-12 74.3 74 56.8
ATMG00480 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 6.9e-12 74.3 74 56.8
CARHR282860 Cardamine hirsuta HOM05D007924 ORTHO05D010328 6.9e-12 74.3 74 56.8
Lj3g0001131 Lotus japonicus HOM05D007924 ORTHO05D010328 6.9e-12 74.3 74 58.1
Thhalv10029138m.g Eutrema salsugineum HOM05D007924 ORTHO05D010328 1.5e-11 73.2 74 55.4
BolSC28t60326H Brassica oleracea HOM05D007924 ORTHO05D011743 2.0e-11 72.8 74 55.4
BraSC159t45717Z Brassica rapa HOM05D007924 ORTHO05D010328 2.0e-11 72.8 74 55.4
BraSC48t46292Z Brassica rapa HOM05D007924 ORTHO05D010328 2.0e-11 72.8 74 55.4
BraSC48t46309Z Brassica rapa HOM05D007924 ORTHO05D010328 2.0e-11 72.8 74 55.4
Gorai.001G164500 Gossypium raimondii HOM05D007924 ORTHO05D010328 2.0e-11 72.8 74 56.8
Nitab4.5_0000172g0710 Nicotiana tabacum HOM05D007924 ORTHO05D010328 2.6e-11 72.4 74 59.5
Lalb_Chr14g0363841 Lupinus albus HOM05D007924 ORTHO05D010328 7.6e-11 70.9 69 59.4
Duzib116G0340 Durio zibethinus HOM05D007924 ORTHO05D010328 3.8e-10 68.6 74 54.1
MD02G1208400 Malus domestica HOM05D007924 ORTHO05D010328 2.4e-09 65.9 52 69.2
C01p34680 Brassica napus HOM05D007924 ORTHO05D010328 5.5e-09 64.7 74 51.4
BolC1t03437H Brassica oleracea HOM05D007924 ORTHO05D010328 5.5e-09 64.7 74 51.4
Phvul.011G125800 Phaseolus vulgaris HOM05D007924 ORTHO05D010328 7.1e-09 64.3 60 60.0
CsaV3_5G016970 Cucumis sativus L. HOM05D007924 ORTHO05D010328 1.6e-08 63.2 73 54.8
CAN.G1001.34 Capsicum annuum HOM05D007924 ORTHO05D010328 6.7e-07 57.8 74 54.1
Cc00_g19130 Coffea canephora HOM05D007924 ORTHO05D154004 2.5e-06 55.8 68 51.5
HanXRQChr15g0468771 Helianthus annuus HOM05D007924 ORTHO05D010328 7.4e-06 54.3 57 56.1


User provided reference genes

Program Settings