Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 9.2e-44 179.9 93 100.0
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 4.4e-30 134.4 79 84.8
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 9.8e-30 133.3 79 82.3
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 1.7e-29 132.5 79 82.3
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 1.7e-29 132.5 79 82.3
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 2.9e-29 131.7 85 75.3
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 3.7e-29 131.3 85 77.6
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 4.9e-29 131.0 85 75.3
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 4.9e-29 131.0 85 75.3
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 6.4e-29 130.6 85 76.5
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 8.3e-29 130.2 86 75.6
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.1e-28 129.8 85 75.3
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.4e-28 129.4 85 75.3
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.4e-28 129.4 79 78.5
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.4e-28 129.4 85 76.5
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 1.9e-28 129.0 85 75.3
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 1.9e-28 129.0 85 75.3
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 1.9e-28 129.0 85 75.3
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 1.9e-28 129.0 85 76.5
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 2.4e-28 128.6 79 77.2
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 2.4e-28 128.6 85 74.1
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 2.4e-28 128.6 85 75.3
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 3.2e-28 128.3 79 78.5
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 3.2e-28 128.3 79 79.7
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 4.1e-28 127.9 85 75.3
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 4.1e-28 127.9 85 74.1
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 5.4e-28 127.5 85 74.1
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 7.1e-28 127.1 85 70.6
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 7.1e-28 127.1 79 78.5
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 9.2e-28 126.7 79 78.5
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 9.2e-28 126.7 85 74.1
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 1.2e-27 126.3 85 75.3
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 1.6e-27 125.9 89 69.7
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 1.6e-27 125.9 85 71.8
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 2.1e-27 125.6 85 74.1
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.1e-27 125.6 85 74.1
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 2.1e-27 125.6 79 78.5
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 2.7e-27 125.2 85 70.6
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 2.7e-27 125.2 85 71.8
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 4.6e-27 124.4 85 72.9
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 4.6e-27 124.4 81 74.1
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 6.0e-27 124.0 83 73.5
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 6.0e-27 124.0 81 74.1
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 6.0e-27 124.0 81 74.1
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 6.0e-27 124.0 79 74.7
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 6.0e-27 124.0 85 71.8
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 7.8e-27 123.6 85 70.6
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 7.8e-27 123.6 85 70.6
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 1.3e-26 122.9 85 71.8
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 1.7e-26 122.5 85 70.6
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 2.3e-26 122.1 85 70.6
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 5.1e-26 120.9 85 70.6
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 5.1e-26 120.9 85 70.6
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 5.1e-26 120.9 85 70.6
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 6.6e-26 120.6 81 71.6
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 6.6e-26 120.6 81 71.6
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 8.6e-26 120.2 79 74.7
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.5e-25 119.4 85 69.4
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 1.9e-25 119.0 79 73.4
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.9e-25 119.0 78 74.4
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 1.9e-25 119.0 85 68.2
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.9e-25 119.0 85 69.4
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 3.3e-25 118.2 71 80.3
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 3.3e-25 118.2 86 67.4
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 3.3e-25 118.2 79 74.7
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 3.3e-25 118.2 78 75.6
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 5.6e-25 117.5 85 68.2
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 9.5e-25 116.7 77 74.0
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 9.5e-25 116.7 79 72.2
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.2e-24 116.3 85 69.4
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 1.2e-24 116.3 79 73.4
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 1.6e-24 115.9 79 70.9
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.6e-24 114.8 85 68.2
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 3.6e-24 114.8 79 69.6
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 4.7e-24 114.4 79 69.6
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 4.7e-24 114.4 85 63.5
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 6.2e-24 114.0 85 64.7
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 8.1e-24 113.6 80 70.0
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 1.1e-23 113.2 78 70.5
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.8e-23 112.5 79 68.4
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 5.2e-23 110.9 77 67.5
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 6.8e-23 110.5 84 67.9
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 8.9e-23 110.2 79 65.8
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 2.0e-22 109.0 79 68.4
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 2.0e-22 109.0 79 67.1
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 2.0e-22 109.0 69 75.4
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 4.4e-22 107.8 79 67.1
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 9.9e-22 106.7 79 65.8
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 2.9e-21 105.1 85 63.5
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 6.4e-21 104.0 78 65.4
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 3.2e-20 101.7 78 64.1
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 4.1e-20 101.3 79 63.3
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 5.4e-20 100.9 78 62.8
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 7.1e-20 100.5 78 62.8
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 1.6e-19 99.4 78 61.5
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 2.1e-19 99.0 78 61.5
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 2.7e-19 98.6 78 60.3
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 2.7e-19 98.6 78 60.3
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 2.7e-19 98.6 78 60.3
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 2.7e-19 98.6 78 60.3
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 2.7e-19 98.6 78 60.3
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 1.0e-18 96.7 78 59.0
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 1.7e-18 95.9 78 59.0
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 1.7e-18 95.9 78 59.0
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 3.9e-18 94.7 75 62.7
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 6.6e-18 94.0 84 57.1
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 1.1e-17 93.2 79 59.5
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 2.5e-17 92.0 56 76.8
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 8.1e-16 87.0 85 56.5
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 4.0e-15 84.7 79 54.4
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 6.8e-15 84.0 63 63.5
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 2.2e-13 79.0 48 75.0
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.1e-12 76.6 63 60.3
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.4e-12 76.3 57 68.4
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 1.9e-12 75.9 78 51.3
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 1.9e-12 75.9 57 63.2
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 2.4e-12 75.5 69 58.0
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 5.4e-12 74.3 57 61.4
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 9.3e-12 73.6 54 63.0
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 1.6e-11 72.8 57 64.9
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 3.6e-08 61.6 45 64.4
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 3.6e-08 61.6 45 64.4
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 4.8e-08 61.2 46 67.4
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 6.2e-08 60.8 46 63.0


User provided reference genes

Program Settings