Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-262 909.4 441 100.0
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 9.9e-180 634.0 424 75.7
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 1.4e-141 507.3 542 54.1
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 5.5e-130 468.8 434 61.8
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 9.7e-127 458.0 387 65.6
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 9.7e-127 458.0 387 65.6
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 1.1e-80 305.1 578 36.0
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 2.6e-79 300.4 364 50.3
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 3.4e-79 300.1 582 35.7
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 1.7e-78 297.7 586 35.5
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 3.7e-78 296.6 585 34.9
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 1.4e-77 294.7 618 34.6
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 5.4e-77 292.7 556 35.1
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 2.1e-76 290.8 577 34.1
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 2.3e-75 287.3 597 33.3
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 3.0e-75 287.0 576 35.1
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 3.9e-75 286.6 580 34.0
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 1.5e-74 284.6 559 34.2
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 2.5e-74 283.9 590 33.1
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 5.6e-74 282.7 558 34.8
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 2.8e-73 280.4 550 34.7
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 2.8e-73 280.4 222 67.6
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 4.7e-73 279.6 585 35.4
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 4.7e-73 279.6 559 35.4
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 6.2e-73 279.3 559 35.4
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 6.2e-73 279.3 592 32.9
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 6.2e-73 279.3 575 33.4
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 1.1e-72 278.5 559 34.3
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 1.5e-71 274.6 552 34.8
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 1.5e-71 274.6 604 32.9
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 3.4e-71 273.5 557 33.4
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 1.7e-70 271.2 581 32.4
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 2.2e-70 270.8 572 32.5
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 2.2e-70 270.8 164 81.1
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 3.8e-70 270.0 248 61.3
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 2.4e-69 267.3 590 31.9
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 4.1e-69 266.5 590 32.0
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 5.4e-69 266.2 582 32.8
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 9.2e-69 265.4 561 33.0
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 1.2e-68 265.0 584 32.9
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.1e-68 264.2 582 33.2
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 2.1e-68 264.2 617 31.4
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 2.7e-68 263.8 617 31.4
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.5e-68 263.5 582 33.2
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.5e-68 263.5 584 32.7
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.5e-68 263.5 584 32.7
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.5e-68 263.5 582 33.2
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 4.6e-68 263.1 559 32.9
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 6.0e-68 262.7 582 32.1
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 6.0e-68 262.7 544 33.6
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 1.0e-67 261.9 543 35.7
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 1.0e-67 261.9 559 32.9
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 1.7e-67 261.2 188 69.1
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 3.0e-67 260.4 558 32.8
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 3.0e-67 260.4 560 32.7
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.9e-67 260.0 569 33.0
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 2.5e-66 257.3 560 31.4
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 7.3e-66 255.8 558 32.6
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 7.3e-66 255.8 560 32.7
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 9.6e-66 255.4 561 32.4
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 3.6e-65 253.4 557 32.0
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 3.6e-65 253.4 584 31.0
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 4.7e-65 253.1 548 31.8
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 6.9e-64 249.2 561 31.9
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 1.5e-63 248.1 557 31.2
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 2.6e-63 247.3 557 32.1
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 4.4e-63 246.5 581 31.2
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 5.8e-63 246.1 555 31.7
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 5.8e-63 246.1 581 30.5
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 5.8e-63 246.1 580 30.9
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 7.6e-63 245.7 576 31.1
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 9.9e-63 245.4 560 31.4
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 1.3e-62 245.0 563 30.9
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 3.8e-62 243.4 557 31.6
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 4.9e-62 243.0 586 32.1
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 6.4e-62 242.7 584 30.8
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 1.1e-61 241.9 585 31.6
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 2.4e-61 240.7 557 31.1
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 3.2e-61 240.4 557 30.7
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 5.4e-61 239.6 557 31.2
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 7.1e-61 239.2 603 30.0
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 9.3e-61 238.8 560 31.8
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.6e-60 238.0 555 30.6
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 6.0e-60 236.1 521 32.6
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 6.0e-60 236.1 546 31.1
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 7.8e-60 235.7 557 30.0
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 7.8e-60 235.7 580 30.0
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 1.7e-59 234.6 549 29.7
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 2.3e-59 234.2 557 31.2
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 8.7e-59 232.3 557 30.9
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 8.7e-59 232.3 576 31.4
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 8.7e-59 232.3 575 29.7
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 1.1e-58 231.9 554 31.4
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 1.9e-58 231.1 553 31.3
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 3.3e-58 230.3 553 31.5
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 4.3e-58 229.9 554 31.0
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 1.3e-57 228.4 553 31.1
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 3.6e-57 226.9 556 29.1
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 4.8e-57 226.5 552 31.0
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 1.1e-56 225.3 553 30.7
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 1.1e-56 225.3 553 30.7
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 3.1e-56 223.8 588 28.6
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-55 221.9 118 90.7
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 1.3e-54 218.4 549 30.2
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 2.9e-54 217.2 197 61.4
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 4.9e-54 216.5 567 28.6
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 1.6e-52 211.5 579 30.1
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 1.8e-51 208.0 574 29.8
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 1.4e-48 198.4 531 28.2
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 3.4e-47 193.7 419 30.8
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 7.9e-44 182.6 421 31.4
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 2.1e-41 174.5 100 89.0
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 5.3e-40 169.9 467 29.3
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 5.8e-39 166.4 494 27.1
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 2.2e-38 164.5 468 28.6
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 3.9e-35 153.7 278 38.5
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 6.9e-32 142.9 254 36.2
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 6.9e-32 142.9 623 25.2
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 7.6e-31 139.4 109 65.1
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 2.5e-29 134.4 540 24.4
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 4.6e-28 130.2 89 74.2
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 9.7e-26 122.5 632 22.9
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 5.0e-22 110.2 139 43.2
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 2.3e-19 101.3 187 33.7
SHI34648 Sapria himalayana HOM05D002853 ORTHO05D003030 3.0e-19 100.9 118 47.5
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-18 99.0 59 79.7
VMungo0251G2567 Vigna mungo HOM05D004911 ORTHO05D018492 1.7e-14 85.1 79 54.4
SHI00990 Sapria himalayana HOM05D000360 ORTHO05D000234 2.9e-14 84.3 48 79.2
SHI49910 Sapria himalayana HOM05D000360 ORTHO05D003030 2.9e-14 84.3 47 78.7
SHI23756 Sapria himalayana HOM05D000360 ORTHO05D000234 6.1e-12 76.6 47 74.5
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 2.8e-09 67.8 108 36.1
Dinv29855 Davidia involucrata HOM05D004911 ORTHO05D005930 9.1e-08 62.8 42 64.3
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 1.2e-07 62.4 183 25.1


User provided reference genes

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