Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 1.3e-140 503.1 254 100.0
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 6.7e-97 357.8 258 74.0
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-93 346.7 237 75.5
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 3.7e-79 298.9 207 73.9
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 5.9e-69 265.0 159 83.6
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 5.0e-68 261.9 155 84.5
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 6.3e-63 245.0 169 75.1
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 3.8e-60 235.7 169 72.2
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 4.3e-51 205.7 261 44.1
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 5.6e-51 205.3 261 43.7
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 1.4e-49 200.7 254 46.5
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 8.9e-49 198.0 246 45.1
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 4.1e-46 189.1 253 42.3
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 3.5e-45 186.0 257 42.0
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 4.6e-45 185.7 257 42.0
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 4.7e-42 175.6 259 42.5
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 1.8e-41 173.7 266 41.0
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 2.3e-41 173.3 259 40.2
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 3.1e-41 172.9 250 39.2
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 4.0e-41 172.6 259 40.9
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 1.5e-40 170.6 251 39.4
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 2.0e-40 170.2 258 41.5
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 2.0e-40 170.2 251 39.4
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 2.6e-40 169.9 251 39.4
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 2.6e-40 169.9 270 40.0
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 3.4e-40 169.5 251 38.6
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 2.2e-39 166.8 255 38.0
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 2.2e-39 166.8 258 40.3
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.9e-39 166.4 249 40.2
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 3.7e-39 166.0 241 41.9
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 6.4e-39 165.2 258 40.7
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 6.4e-39 165.2 253 39.1
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 8.3e-39 164.9 249 39.8
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 8.3e-39 164.9 259 37.5
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 1.1e-38 164.5 256 39.8
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 1.1e-38 164.5 257 36.2
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 1.4e-38 164.1 266 37.2
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.4e-38 164.1 253 38.7
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.4e-38 164.1 253 38.7
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 1.4e-38 164.1 243 41.2
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 1.4e-38 164.1 250 39.6
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 1.9e-38 163.7 265 40.4
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.9e-38 163.7 253 38.7
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.4e-38 163.3 253 38.7
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 3.2e-38 162.9 244 39.8
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 7.1e-38 161.8 258 39.5
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 9.2e-38 161.4 265 41.1
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 9.2e-38 161.4 261 39.5
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 2.7e-37 159.8 262 39.7
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 2.7e-37 159.8 277 36.5
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 7.8e-37 158.3 261 37.5
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 1.7e-36 157.1 251 38.2
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 5.1e-36 155.6 269 37.5
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 5.1e-36 155.6 244 39.8
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 8.6e-36 154.8 204 47.5
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 8.6e-36 154.8 204 47.5
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 1.5e-35 154.1 276 37.3
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 1.9e-35 153.7 260 37.3
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 2.5e-35 153.3 263 35.0
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 2.5e-35 153.3 248 40.3
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 4.3e-35 152.5 250 36.4
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 5.6e-35 152.1 246 36.6
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 7.3e-35 151.8 248 39.5
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 1.2e-34 151.0 250 35.6
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 1.2e-34 151.0 264 34.8
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 1.6e-34 150.6 247 36.0
SHI38853 Sapria himalayana HOM05D004911 ORTHO05D005930 2.1e-34 150.2 245 43.3
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 2.8e-34 149.8 221 41.2
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 2.8e-34 149.8 265 35.8
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 4.7e-34 149.1 271 34.7
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 6.2e-34 148.7 249 38.2
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 8.1e-34 148.3 267 37.8
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 1.1e-33 147.9 245 35.9
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 1.1e-33 147.9 253 38.3
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 1.8e-33 147.1 248 36.3
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 1.8e-33 147.1 248 36.3
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 2.3e-33 146.7 245 36.3
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 2.3e-33 146.7 245 36.7
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 2.3e-33 146.7 262 35.5
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 6.8e-33 145.2 245 36.3
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 6.8e-33 145.2 245 35.5
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 8.9e-33 144.8 266 36.1
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 1.5e-32 144.1 245 35.9
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 1.5e-32 144.1 265 35.8
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 2.6e-32 143.3 166 50.0
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 1.7e-31 140.6 165 45.5
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 1.9e-30 137.1 247 35.2
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 7.1e-30 135.2 244 37.7
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 1.2e-29 134.4 164 41.5
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 3.9e-28 129.4 266 35.3
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 3.9e-28 129.4 266 35.3
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 5.1e-28 129.0 273 32.6
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 2.5e-27 126.7 266 34.6
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 3.3e-27 126.3 277 32.1
SHI53022 Sapria himalayana HOM05D004911 ORTHO05D005930 6.9e-25 118.6 68 88.2
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 8.9e-25 118.2 246 33.7
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 2.0e-24 117.1 259 34.4
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 2.6e-24 116.7 121 46.3
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 2.6e-24 116.7 259 35.1
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 3.4e-24 116.3 267 32.2
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 5.8e-24 115.5 267 32.2
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 5.8e-24 115.5 260 33.1
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 1.3e-23 114.4 254 33.1
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 1.7e-23 114.0 273 30.4
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 2.9e-23 113.2 257 35.4
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 6.4e-23 112.1 159 38.4
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 1.9e-22 110.5 242 34.3
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 3.2e-22 109.8 277 31.0
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 4.2e-22 109.4 261 30.7
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 3.0e-20 103.2 272 31.6
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 1.9e-19 100.5 170 36.5
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 3.5e-13 79.7 264 28.0
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 5.6e-11 72.4 72 43.1
SHI39003 Sapria himalayana HOM05D063069 ORTHO05D369362 2.9e-07 60.1 83 49.4


User provided reference genes

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