Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34881 Sapria himalayana HOM05D006066 ORTHO05D007720 6.2e-196 687.2 325 100.0
Potri.002G241366 Populus trichocarpa HOM05D006066 ORTHO05D007720 3.1e-78 296.2 371 42.6
Atru.chr11.2652 Acer truncatum HOM05D006066 ORTHO05D007720 4.4e-77 292.4 377 43.0
Cpa.g.sc8.165 Carica papaya HOM05D006066 ORTHO05D007720 1.2e-74 284.3 376 41.5
Duzib133G0184 Durio zibethinus HOM05D006066 ORTHO05D007720 6.0e-74 282.0 368 42.4
RcHm_v2.0_Chr6g0284991 Rosa chinensis HOM05D006066 ORTHO05D007720 6.6e-73 278.5 375 42.4
FvH4_2g19201 Fragaria vesca HOM05D006066 ORTHO05D007720 5.6e-72 275.4 374 42.0
Gorai.007G153600 Gossypium raimondii HOM05D006066 ORTHO05D007720 7.3e-72 275.0 376 40.2
Manes.11G092400 Manihot esculenta HOM05D006066 ORTHO05D007720 1.2e-71 274.2 379 40.6
MD10G1165500 Malus domestica HOM05D006066 ORTHO05D007720 8.1e-71 271.6 379 41.2
TWI36G0510 Tripterygium wilfordii HOM05D006066 ORTHO05D007720 4.0e-70 269.2 368 41.6
Hma1.2p1_1061F.1_g253440 Hydrangea macrophylla HOM05D006066 ORTHO05D007720 5.2e-70 268.9 377 39.3
CiPaw.01G110500 Carya illinoinensis HOM05D006066 ORTHO05D007720 1.5e-69 267.3 375 40.0
Gohir.A11G137000 Gossypium hirsutum HOM05D006066 ORTHO05D007720 1.5e-69 267.3 376 39.1
Ciclev10020152m.g Citrus clementina HOM05D006066 ORTHO05D007720 7.6e-69 265.0 361 41.3
Prupe.8G204000 Prunus persica HOM05D006066 ORTHO05D007720 7.6e-69 265.0 379 40.4
Cfa008679 Carpinus fangiana HOM05D006066 ORTHO05D007720 2.2e-68 263.5 368 41.3
Dinv09237 Davidia involucrata HOM05D006066 ORTHO05D007720 2.9e-68 263.1 385 40.0
THA.LOC104818950 Tarenaya hassleriana HOM05D006066 ORTHO05D007720 6.4e-68 261.9 386 37.0
Lj2C634T6 Lonicera japonica HOM05D006066 ORTHO05D007720 1.0e-65 254.6 376 38.8
COL.COLO4_07189 Corchorus olitorius HOM05D006066 ORTHO05D007720 3.0e-65 253.1 378 38.4
TAR393G0002 Trochodendron aralioides HOM05D006066 ORTHO05D007720 3.0e-65 253.1 386 37.3
Thhalv10020116m.g Eutrema salsugineum HOM05D006066 ORTHO05D007720 6.6e-65 251.9 383 36.6
CSS0038727 Camellia sinensis var. sinensis HOM05D006066 ORTHO05D007720 8.7e-65 251.5 383 38.4
CSS0045030 Camellia sinensis var. sinensis HOM05D006066 ORTHO05D007720 8.7e-65 251.5 383 38.4
C05p60330 Brassica napus HOM05D006066 ORTHO05D007720 1.5e-64 250.8 379 37.2
BraA05t22840Z Brassica rapa HOM05D006066 ORTHO05D000168 3.3e-64 249.6 383 36.8
BolC5t34680H Brassica oleracea HOM05D006066 ORTHO05D007720 1.6e-63 247.3 380 36.8
Rhsim01G0256300 Rhododendron simsii HOM05D006066 ORTHO05D007720 1.6e-63 247.3 376 37.0
Eucgr.K03610 Eucalyptus grandis HOM05D006066 ORTHO05D007720 4.8e-63 245.7 374 35.6
BcaC05g29836 Brassica carinata HOM05D006066 ORTHO05D000168 6.2e-63 245.4 369 37.7
A05p41140 Brassica napus HOM05D006066 ORTHO05D007720 1.4e-62 244.2 373 37.0
Sp3g06000 Schrenkiella parvula HOM05D006066 ORTHO05D007720 6.9e-62 241.9 379 36.1
BcaC05g29758 Brassica carinata HOM05D006066 ORTHO05D007720 1.2e-61 241.1 381 35.4
QL06p028105 Quercus lobata HOM05D006066 ORTHO05D007720 2.0e-61 240.4 464 33.6
Lj3g0025737 Lotus japonicus HOM05D006066 ORTHO05D007720 1.7e-60 237.3 395 37.0
EL10Ac7g17774 Beta vulgaris HOM05D006066 ORTHO05D007720 2.9e-60 236.5 378 35.7
AL3G18290 Arabidopsis lyrata HOM05D006066 ORTHO05D007720 4.9e-60 235.7 383 33.9
ClCG07G001890 Citrullus lanatus HOM05D006066 ORTHO05D007720 4.9e-60 235.7 380 36.8
Lj2A644T10 Lonicera japonica HOM05D006066 ORTHO05D007720 6.4e-60 235.3 389 36.8
AT3G07060 Arabidopsis thaliana HOM05D006066 ORTHO05D007720 1.1e-59 234.6 384 35.4
CAN.G154.6 Capsicum annuum HOM05D006066 ORTHO05D007720 1.1e-59 234.6 367 36.2
Eucgr.L02049 Eucalyptus grandis HOM05D006066 ORTHO05D007720 1.1e-59 234.6 374 35.3
Aqoxy2G03103 Aquilegia oxysepala HOM05D006066 ORTHO05D007720 5.4e-59 232.3 376 34.6
Solyc09g061380.3 Solanum lycopersicum HOM05D006066 ORTHO05D007720 7.1e-59 231.9 365 36.4
CARHR081650 Cardamine hirsuta HOM05D006066 ORTHO05D007720 9.3e-59 231.5 383 33.9
Cc01_g17160 Coffea canephora HOM05D006066 ORTHO05D007720 9.3e-59 231.5 381 33.6
PGR119G0212 Punica granatum HOM05D006066 ORTHO05D007720 2.7e-58 229.9 376 35.4
Sopen09g024200 Solanum pennellii HOM05D006066 ORTHO05D007720 3.5e-58 229.6 365 36.4
MD05G1176900 Malus domestica HOM05D006066 ORTHO05D007720 7.9e-58 228.4 310 41.9
Nn1g07817 Nelumbo nucifera HOM05D006066 ORTHO05D007720 7.9e-58 228.4 377 35.8
Psat2g159600 Pisum sativum HOM05D006066 ORTHO05D007720 1.0e-57 228.0 386 35.2
vmacro14760 Vaccinium macrocarpon HOM05D006066 ORTHO05D007720 2.3e-57 226.9 390 34.9
VMungo0331G1521 Vigna mungo HOM05D006066 ORTHO05D007720 2.3e-57 226.9 387 35.4
AUR62008867 Chenopodium quinoa HOM05D006066 ORTHO05D007720 3.0e-57 226.5 372 36.6
Lalb_Chr07g0194051 Lupinus albus HOM05D006066 ORTHO05D007720 3.9e-57 226.1 381 34.9
Nitab4.5_0000045g0020 Nicotiana tabacum HOM05D006066 ORTHO05D007720 3.9e-57 226.1 365 36.2
TPR.G5589 Trifolium pratense HOM05D006066 ORTHO05D007720 3.9e-57 226.1 392 34.9
AUR62031844 Chenopodium quinoa HOM05D006066 ORTHO05D007720 5.1e-57 225.7 370 35.9
Migut.D00528 Erythranthe guttata HOM05D006066 ORTHO05D007720 5.1e-57 225.7 382 34.0
MELO3C026986.2 Cucumis melo HOM05D006066 ORTHO05D007720 6.7e-57 225.3 379 36.1
CsaV3_3G029870 Cucumis sativus L. HOM05D006066 ORTHO05D007720 6.7e-57 225.3 379 35.4
PSO170G1150 Papaver somniferum HOM05D006066 ORTHO05D007720 6.7e-57 225.3 374 38.0
ECA236G0120 Erigeron canadensis HOM05D006066 ORTHO05D007720 1.5e-56 224.2 366 36.3
Ca_26562_v3 Cicer arietinum L. HOM05D006066 ORTHO05D007720 1.9e-56 223.8 392 34.7
PSO782G0283 Papaver somniferum HOM05D006066 ORTHO05D007720 2.5e-56 223.4 374 37.2
Carub.0003s0657 Capsella rubella HOM05D006066 ORTHO05D007720 7.4e-56 221.9 384 34.1
HanXRQChr04g0110731 Helianthus annuus HOM05D006066 ORTHO05D007720 1.3e-55 221.1 366 35.8
Ah.08g213920 Amaranthus hybridus HOM05D006066 ORTHO05D007720 2.8e-55 219.9 357 35.3
Medtr7g026915 Medicago truncatula HOM05D006066 ORTHO05D007720 3.6e-55 219.5 393 34.1
Thecc.01G227100 Theobroma cacao HOM05D006066 ORTHO05D007720 6.2e-55 218.8 309 39.8
Sed0017682 Sechium edule HOM05D006066 ORTHO05D007720 8.1e-55 218.4 366 35.2
Nitab4.5_0001872g0040 Nicotiana tabacum HOM05D006066 ORTHO05D007720 1.4e-54 217.6 365 35.3
GSVIVG01028660001 Vitis vinifera HOM05D006066 ORTHO05D007720 1.4e-54 217.6 508 31.7
Aa31LG5G17620 Aethionema arabicum HOM05D006066 ORTHO05D007720 2.4e-54 216.9 435 30.8
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 2.4e-54 216.9 369 36.6
Medtr4g022660 Medicago truncatula HOM05D006066 ORTHO05D007720 9.0e-54 214.9 392 33.7
Haze_11697 Corylus avellana HOM05D006066 ORTHO05D007720 9.9e-53 211.5 356 37.1
FAN15G1679 Fragaria x ananassa HOM05D006066 ORTHO05D007720 3.8e-52 209.5 374 36.1
FAN24G1416 Fragaria x ananassa HOM05D006066 ORTHO05D000168 3.8e-52 209.5 374 36.1
Zm00001eb173150 Zea mays HOM05D006066 ORTHO05D007720 4.2e-51 206.1 374 32.1
SGA_v2.0_scaffold8G04647 Striga asiatica HOM05D006066 ORTHO05D007720 5.5e-51 205.7 395 31.4
Hund18348 Selenicereus undatus HOM05D006066 ORTHO05D007720 1.3e-49 201.1 384 31.5
Gohir.D11G143350 Gossypium hirsutum HOM05D006066 ORTHO05D007720 3.9e-49 199.5 192 49.5
Actinidia23727 Actinidia chinensis HOM05D006066 ORTHO05D007720 4.3e-48 196.1 382 31.9
SalBow6G7080 Salvia bowleyana HOM05D006066 ORTHO05D007720 1.6e-47 194.1 390 30.5
Peaxi162Scf00107g01622 Petunia axillaris HOM05D006066 ORTHO05D007720 2.8e-47 193.4 305 35.7
SGA_v2.0_scaffold586G53055 Striga asiatica HOM05D006066 ORTHO05D007720 6.9e-46 188.7 328 33.2
Hma1.2p1_1061F.1_g253450 Hydrangea macrophylla HOM05D006066 ORTHO05D007720 2.6e-45 186.8 306 35.9
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 8.4e-44 181.8 374 31.0
Sc24g0003620 Simmondsia chinensis HOM05D006066 ORTHO05D007720 5.5e-43 179.1 191 42.9
Glyma.19G124200 Glycine max HOM05D006066 ORTHO05D007720 1.6e-42 177.6 197 45.7
arahy.Tifrunner.gnm1.ann1.50JBL9 Arachis hypogaea HOM05D006066 ORTHO05D007720 6.0e-42 175.6 195 44.1
CDE06G2585 Ceratophyllum demersum HOM05D006066 ORTHO05D007720 1.9e-40 170.6 248 37.9
arahy.Tifrunner.gnm1.ann1.9R7KTD Arachis hypogaea HOM05D006066 ORTHO05D007720 4.3e-40 169.5 193 43.5
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 7.4e-40 168.7 317 34.7
Phvul.010G014600 Phaseolus vulgaris HOM05D006066 ORTHO05D007720 5.3e-38 162.5 340 32.4
Dinv01555 Davidia involucrata HOM05D006066 ORTHO05D007720 9.0e-38 161.8 270 35.9
unitig_22.g5305 Utricularia gibba HOM05D006066 ORTHO05D007720 7.2e-35 152.1 335 30.7
FAN27G1043 Fragaria x ananassa HOM05D006066 ORTHO05D007720 9.7e-32 141.7 326 32.5
SEGI_19430 Sequoiadendron giganteum HOM05D006066 ORTHO05D007720 3.1e-30 136.7 336 27.7
Aqoxy5G00070 Aquilegia oxysepala HOM05D006066 ORTHO05D007720 1.7e-28 131.0 286 31.5
MSTRG.21425 Avicennia marina HOM05D006066 ORTHO05D007720 2.1e-26 124.0 133 43.6
PSO674G0067 Papaver somniferum HOM05D006066 ORTHO05D007720 1.3e-20 104.8 257 30.4
MSTRG.21426 Avicennia marina HOM05D006066 ORTHO05D007720 3.6e-18 96.7 129 38.0
Mapoly0057s0011 Marchantia polymorpha HOM05D006066 ORTHO05D007720 2.2e-15 87.4 385 24.7
Dinv01554 Davidia involucrata HOM05D006066 ORTHO05D007720 3.7e-15 86.7 58 67.2
Pp3c3_5060 Physcomitrium patens HOM05D006066 ORTHO05D007720 8.2e-15 85.5 371 24.0
vmacro14757 Vaccinium macrocarpon HOM05D006066 ORTHO05D007720 1.7e-12 77.8 66 54.5
TPR.G638 Trifolium pratense HOM05D006066 ORTHO05D007720 8.2e-07 58.9 45 55.6
Pp3c22_14790 Physcomitrium patens HOM05D005293 ORTHO05D006764 2.4e-06 57.4 129 29.5
Lsat_1_v5_gn_1_123760 Lactuca sativa HOM05D006066 ORTHO05D003550 3.1e-06 57.0 58 48.3


User provided reference genes

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