Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 4.0e-173 611.3 298 100.0
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 7.5e-148 527.3 295 90.2
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-122 442.2 341 70.4
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 4.3e-103 378.6 308 67.9
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 2.0e-100 369.8 318 65.1
SHI20620 Sapria himalayana HOM05D005261 ORTHO05D006180 6.5e-91 338.2 256 73.4
SHI32317 Sapria himalayana HOM05D005261 ORTHO05D006180 1.9e-82 310.1 257 66.1
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 5.3e-69 265.4 332 47.3
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 5.3e-69 265.4 327 47.1
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 1.2e-68 264.2 334 47.6
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 1.2e-68 264.2 338 47.0
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 2.6e-68 263.1 334 48.5
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 1.7e-67 260.4 330 48.8
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 1.7e-67 260.4 329 48.3
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 2.2e-67 260.0 331 49.2
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 2.2e-67 260.0 354 45.8
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 2.9e-67 259.6 321 47.7
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 6.5e-67 258.5 334 46.4
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 1.4e-66 257.3 353 44.2
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 3.2e-66 256.1 353 45.0
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 3.2e-66 256.1 331 46.5
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 3.2e-66 256.1 331 46.5
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 5.5e-66 255.4 353 45.0
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 5.5e-66 255.4 320 47.8
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 7.2e-66 255.0 335 45.7
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 7.2e-66 255.0 320 47.8
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 9.4e-66 254.6 333 45.9
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 1.6e-65 253.8 335 46.0
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 1.6e-65 253.8 327 48.3
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 1.6e-65 253.8 314 49.7
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 2.1e-65 253.4 296 50.0
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 4.7e-65 252.3 326 46.6
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 4.7e-65 252.3 339 45.1
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 6.1e-65 251.9 333 45.6
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 7.9e-65 251.5 333 45.9
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 7.9e-65 251.5 302 48.0
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 1.0e-64 251.1 326 46.3
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 1.4e-64 250.8 324 46.0
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 5.2e-64 248.8 347 45.2
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 6.7e-64 248.4 292 49.0
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 6.7e-64 248.4 329 46.8
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 6.7e-64 248.4 329 46.8
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 1.1e-63 247.7 280 49.6
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 1.1e-63 247.7 298 48.3
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 1.5e-63 247.3 280 49.6
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 2.6e-63 246.5 312 47.1
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 2.6e-63 246.5 331 45.0
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 2.6e-63 246.5 302 49.7
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 3.3e-63 246.1 287 50.9
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 7.4e-63 245.0 294 51.4
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 7.4e-63 245.0 291 49.5
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 7.4e-63 245.0 289 50.5
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 1.7e-62 243.8 331 46.2
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 1.7e-62 243.8 290 49.3
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 1.7e-62 243.8 287 48.8
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 1.7e-62 243.8 347 46.7
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 2.2e-62 243.4 309 47.6
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 2.2e-62 243.4 327 45.9
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 2.8e-62 243.0 287 48.8
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 2.8e-62 243.0 307 49.2
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 2.8e-62 243.0 285 50.2
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 2.8e-62 243.0 331 45.0
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 4.8e-62 242.3 294 49.3
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 4.8e-62 242.3 291 47.4
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 6.3e-62 241.9 287 48.8
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 6.3e-62 241.9 287 48.4
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 8.2e-62 241.5 320 47.2
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 1.1e-61 241.1 291 50.5
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 1.1e-61 241.1 290 49.0
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 1.4e-61 240.7 310 46.8
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 1.4e-61 240.7 288 50.0
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 2.4e-61 240.0 384 41.1
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 2.4e-61 240.0 299 46.2
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 4.1e-61 239.2 328 44.8
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 5.3e-61 238.8 312 46.5
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 5.3e-61 238.8 312 46.5
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 7.0e-61 238.4 308 47.1
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 7.0e-61 238.4 308 47.1
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 1.2e-60 237.7 327 45.3
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 1.2e-60 237.7 290 46.9
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 1.6e-60 237.3 316 45.6
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 2.6e-60 236.5 315 46.0
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 3.5e-60 236.1 282 49.3
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 4.5e-60 235.7 327 45.3
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 4.5e-60 235.7 332 45.2
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 4.5e-60 235.7 300 47.0
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 5.9e-60 235.3 313 45.4
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 1.0e-59 234.6 314 45.9
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 1.0e-59 234.6 300 46.3
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 1.7e-59 233.8 293 46.8
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.2e-59 233.4 321 45.2
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 5.0e-59 232.3 299 46.8
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 5.0e-59 232.3 318 45.3
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 5.0e-59 232.3 313 45.7
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 1.1e-58 231.1 295 46.1
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 1.1e-58 231.1 343 42.6
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 1.5e-58 230.7 300 46.3
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 1.9e-58 230.3 337 42.4
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 3.2e-58 229.6 308 46.8
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 3.2e-58 229.6 316 44.3
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 3.2e-58 229.6 295 46.4
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 7.2e-58 228.4 296 47.3
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 7.2e-58 228.4 296 47.3
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 2.1e-57 226.9 301 44.2
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 2.7e-57 226.5 302 47.0
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 1.0e-56 224.6 328 43.9
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 1.4e-56 224.2 277 48.4
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 1.5e-55 220.7 296 44.6
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 5.7e-55 218.8 295 45.8
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 1.3e-54 217.6 308 42.9
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 1.4e-53 214.2 320 42.8
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 3.5e-52 209.5 295 42.7
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 3.5e-52 209.5 335 42.4
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 1.1e-50 204.5 289 43.9
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 1.9e-50 203.8 275 44.0
SHI49977 Sapria himalayana HOM05D005261 ORTHO05D006180 2.7e-49 199.9 138 74.6
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 4.7e-49 199.1 290 41.7
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 6.1e-49 198.7 277 46.2
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 1.3e-46 191.0 241 48.1
SHI53472 Sapria himalayana HOM05D005261 ORTHO05D006180 2.2e-46 190.3 149 71.8
SHI46120 Sapria himalayana HOM05D005261 ORTHO05D006180 7.0e-45 185.3 196 57.7
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 2.7e-44 183.3 341 38.1
SHI53189 Sapria himalayana HOM05D005261 ORTHO05D006180 2.7e-44 183.3 134 77.6
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 7.7e-44 181.8 183 53.6
SHI52923 Sapria himalayana HOM05D005261 ORTHO05D006180 8.5e-43 178.3 149 68.5
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 3.2e-42 176.4 181 54.1
Lj3C845T19 Lonicera japonica HOM05D005261 ORTHO05D006180 3.2e-42 176.4 177 55.9
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 2.6e-39 166.8 315 35.9
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 6.3e-38 162.2 367 33.5
SHI43763 Sapria himalayana HOM05D005261 ORTHO05D006180 2.0e-36 157.1 171 56.7
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.3e-30 137.9 181 47.0
SHI50342 Sapria himalayana HOM05D005261 ORTHO05D006180 1.8e-29 134.0 183 50.3
SHI51067 Sapria himalayana HOM05D005261 ORTHO05D006180 1.2e-28 131.3 157 53.5
SHI52089 Sapria himalayana HOM05D005261 ORTHO05D006180 3.0e-27 126.7 100 69.0
SHI41608 Sapria himalayana HOM05D005261 ORTHO05D006180 6.6e-27 125.6 99 73.7
SHI51747 Sapria himalayana HOM05D005261 ORTHO05D006180 4.3e-26 122.9 100 67.0
SHI49044 Sapria himalayana HOM05D005261 ORTHO05D006180 1.7e-19 100.9 102 57.8
PRCOL_00005291 Prasinoderma coloniale HOM05D005261 ORTHO05D006180 2.3e-19 100.5 278 30.9
SHI54958 Sapria himalayana HOM05D005261 ORTHO05D006180 2.3e-19 100.5 56 92.9
Lj3A845G93 Lonicera japonica HOM05D005261 ORTHO05D006180 2.3e-16 90.5 57 70.2
PGSC0003DMG401027564 Solanum tuberosum HOM05D001663 ORTHO05D003186 1.3e-14 84.7 54 68.5
Rhsim13G0124000 Rhododendron simsii HOM05D005261 ORTHO05D006180 3.7e-14 83.2 182 35.2
Cre04.g224002 Chlamydomonas reinhardtii HOM05D005261 ORTHO05D006180 4.9e-14 82.8 170 32.4
Oeu017307.1 Olea europaea HOM05D005261 ORTHO05D006180 5.4e-13 79.3 54 74.1


User provided reference genes

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