Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34641 Sapria himalayana HOM05D000030 ORTHO05D000031 5.1e-44 180.6 89 100.0
SHI12385 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-18 96.3 76 67.1
SHI20466 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-18 96.3 76 67.1
SHI07177 Sapria himalayana HOM05D000030 ORTHO05D000009 4.8e-18 94.4 64 78.1
Lj4g0018687 Lotus japonicus HOM05D000030 ORTHO05D000009 2.8e-13 78.6 51 74.5
Lj5g0027784 Lotus japonicus HOM05D000030 ORTHO05D000009 2.8e-13 78.6 51 74.5
Lj3g0017786 Lotus japonicus HOM05D000030 ORTHO05D000009 6.1e-13 77.4 57 68.4
THA.LOC104805034 Tarenaya hassleriana HOM05D000030 ORTHO05D000009 1.2e-11 73.2 74 50.0
C03p53110 Brassica napus HOM05D000030 ORTHO05D000031 3.4e-11 71.6 51 68.6
Glyma.14G135500 Glycine max HOM05D000030 ORTHO05D000031 5.7e-11 70.9 57 57.9
A02p20280 Brassica napus HOM05D000030 ORTHO05D000009 7.5e-11 70.5 58 62.1
TPR.G16314 Trifolium pratense HOM05D000030 ORTHO05D000031 9.8e-11 70.1 51 64.7
C09p54840 Brassica napus HOM05D000597 ORTHO05D006307 2.2e-10 68.9 59 54.2
BolC3t17576H Brassica oleracea HOM05D000030 ORTHO05D000031 2.2e-10 68.9 51 64.7
SHI24937 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-10 68.9 59 57.6
TPR.G40344 Trifolium pratense HOM05D000030 ORTHO05D000031 2.8e-10 68.6 51 62.7
C02p17500 Brassica napus HOM05D000030 ORTHO05D000031 4.9e-10 67.8 51 64.7
C05p34050 Brassica napus HOM05D000030 ORTHO05D000009 4.9e-10 67.8 48 66.7
SHI14625 Sapria himalayana HOM05D000030 ORTHO05D000009 4.9e-10 67.8 61 57.4
SHI03258 Sapria himalayana HOM05D000030 ORTHO05D000009 6.3e-10 67.4 61 55.7
SHI16275 Sapria himalayana HOM05D000030 ORTHO05D000031 8.3e-10 67.0 61 55.7
THA.LOC104804917 Tarenaya hassleriana HOM05D000030 ORTHO05D000009 8.3e-10 67.0 76 48.7
C05p34480 Brassica napus HOM05D000030 ORTHO05D000031 1.4e-09 66.2 51 62.7
Lj5g0014897 Lotus japonicus HOM05D000030 ORTHO05D000009 1.4e-09 66.2 46 71.7
C02p47240 Brassica napus HOM05D000030 ORTHO05D000031 1.8e-09 65.9 60 53.3
C02p47260 Brassica napus HOM05D000030 ORTHO05D000031 1.8e-09 65.9 60 53.3
C04p37590 Brassica napus HOM05D000030 ORTHO05D000031 2.4e-09 65.5 60 53.3
SHI50411 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-09 65.5 77 45.5
arahy.Tifrunner.gnm1.ann1.D4358L Arachis hypogaea HOM05D000030 ORTHO05D000009 3.1e-09 65.1 53 58.5
Ca_14817_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 3.1e-09 65.1 61 59.0
SHI05720 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-09 65.1 77 45.5
SHI18502 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-09 65.1 77 45.5
SHI38003 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-09 65.1 77 45.5
SHI45969 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-09 65.1 77 45.5
SHI46888 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-09 65.1 77 45.5
SHI48678 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-09 65.1 77 45.5
SHI48781 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-09 65.1 77 45.5
SHI49969 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-09 65.1 77 45.5
SHI11611 Sapria himalayana HOM05D000030 ORTHO05D000009 5.4e-09 64.3 62 53.2
SHI40646 Sapria himalayana HOM05D000030 ORTHO05D000009 5.4e-09 64.3 77 45.5
BolC3t14797H Brassica oleracea HOM05D000030 ORTHO05D000031 7.0e-09 63.9 57 57.9
Eucgr.C01635 Eucalyptus grandis HOM05D000030 ORTHO05D000009 7.0e-09 63.9 71 47.9
SHI12525 Sapria himalayana HOM05D000030 ORTHO05D000009 7.0e-09 63.9 64 51.6
SHI14587 Sapria himalayana HOM05D000105 ORTHO05D000009 7.0e-09 63.9 51 60.8
SHI29255 Sapria himalayana HOM05D000030 ORTHO05D000009 7.0e-09 63.9 51 60.8
SHI46829 Sapria himalayana HOM05D000030 ORTHO05D000009 7.0e-09 63.9 77 44.2
Thecc.10G137000 Theobroma cacao HOM05D000030 ORTHO05D000009 7.0e-09 63.9 60 56.7
C03p81350 Brassica napus HOM05D000030 ORTHO05D000031 9.2e-09 63.5 60 51.7
Peaxi162Scf00580g00071 Petunia axillaris HOM05D000030 ORTHO05D000009 9.2e-09 63.5 59 52.5
SHI51692 Sapria himalayana HOM05D000030 ORTHO05D000009 9.2e-09 63.5 50 60.0
BolC2t09592H Brassica oleracea HOM05D028562 ORTHO05D000031 1.2e-08 63.2 58 51.7
BolC2t11456H Brassica oleracea HOM05D000030 ORTHO05D000031 1.2e-08 63.2 58 58.6
Rhsim06G0108000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.2e-08 63.2 64 48.4
SHI14906 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-08 63.2 50 58.0
TPR.G27053 Trifolium pratense HOM05D000030 ORTHO05D000031 1.2e-08 63.2 63 52.4
Eucgr.C01493 Eucalyptus grandis HOM05D000030 ORTHO05D000009 1.6e-08 62.8 71 47.9
HanXRQChr10g0289591 Helianthus annuus HOM05D000030 ORTHO05D000009 1.6e-08 62.8 59 49.2
HanXRQChr16g0498721 Helianthus annuus HOM05D000030 ORTHO05D000031 1.6e-08 62.8 59 49.2
SHI08105 Sapria himalayana HOM05D000030 ORTHO05D000009 1.6e-08 62.8 77 44.2
SHI34290 Sapria himalayana HOM05D000030 ORTHO05D000031 1.6e-08 62.8 51 58.8
C04p55170 Brassica napus HOM05D000030 ORTHO05D000031 2.7e-08 62.0 57 56.1
BolC4t27055H Brassica oleracea HOM05D000030 ORTHO05D000031 2.7e-08 62.0 57 56.1
HanXRQChr08g0237141 Helianthus annuus HOM05D000030 ORTHO05D000031 2.7e-08 62.0 58 51.7
HanXRQChr14g0433801 Helianthus annuus HOM05D000030 ORTHO05D000031 2.7e-08 62.0 58 51.7
Rhsim04G0248700 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.7e-08 62.0 64 48.4
A01p16590 Brassica napus HOM05D000030 ORTHO05D000031 3.5e-08 61.6 53 56.6
BolC7t41054H Brassica oleracea HOM05D000030 ORTHO05D000031 3.5e-08 61.6 51 60.8
RcHm_v2.0_Chr4g0427661 Rosa chinensis HOM05D000030 ORTHO05D000009 3.5e-08 61.6 68 45.6
MD01G1147100 Malus domestica HOM05D000030 ORTHO05D000031 4.5e-08 61.2 50 58.0
MD10G1273100 Malus domestica HOM05D000030 ORTHO05D000009 4.5e-08 61.2 50 58.0
SHI40305 Sapria himalayana HOM05D000030 ORTHO05D000009 4.5e-08 61.2 90 37.8
ECA246G1631 Erigeron canadensis HOM05D000030 ORTHO05D000031 5.9e-08 60.8 66 50.0
Eucgr.B02668 Eucalyptus grandis HOM05D000030 ORTHO05D000009 5.9e-08 60.8 71 45.1
SHI16774 Sapria himalayana HOM05D000030 ORTHO05D000031 5.9e-08 60.8 54 55.6
MBI01_g34911_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 7.8e-08 60.5 74 45.9
A06p33340 Brassica napus HOM05D000030 ORTHO05D012335 1.3e-07 59.7 51 56.9
BolC4t24157H Brassica oleracea HOM05D000030 ORTHO05D000031 1.3e-07 59.7 49 59.2
BolC5t33925H Brassica oleracea HOM05D000030 ORTHO05D000031 1.3e-07 59.7 58 50.0
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 1.3e-07 59.7 48 56.2
Eucgr.E01324 Eucalyptus grandis HOM05D000030 ORTHO05D000009 1.7e-07 59.3 68 45.6
TPR.G30629 Trifolium pratense HOM05D000030 ORTHO05D000031 1.7e-07 59.3 55 50.9
VMungo0251G3648 Vigna mungo HOM05D000030 ORTHO05D000009 1.7e-07 59.3 58 51.7
AUR62034660 Chenopodium quinoa HOM05D000030 ORTHO05D012197 2.3e-07 58.9 54 51.9
Hma1.2p1_1484F.1_g286330 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.3e-07 58.9 47 57.4
MBI18_g10199_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 2.3e-07 58.9 60 55.0
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.3e-07 58.9 80 40.0
AUR62026887 Chenopodium quinoa HOM05D000030 ORTHO05D000031 2.9e-07 58.5 54 51.9
Cc00_g34900 Coffea canephora HOM05D000030 ORTHO05D000009 2.9e-07 58.5 68 42.6
Rhsim01G0147200 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-07 58.5 77 41.6
SHI16607 Sapria himalayana HOM05D000030 ORTHO05D000031 2.9e-07 58.5 50 54.0
Hund01510 Selenicereus undatus HOM05D000030 ORTHO05D000031 2.9e-07 58.5 55 49.1
RcHm_v2.0_Chr1g0315421 Rosa chinensis HOM05D000030 ORTHO05D000009 3.9e-07 58.2 50 56.0
RcHm_v2.0_Chr1g0330231 Rosa chinensis HOM05D000030 ORTHO05D000031 3.9e-07 58.2 47 57.4
Hund07284 Selenicereus undatus HOM05D000030 ORTHO05D000009 3.9e-07 58.2 63 44.4
Hund10093 Selenicereus undatus HOM05D000030 ORTHO05D000009 3.9e-07 58.2 55 49.1
Hund11638 Selenicereus undatus HOM05D000030 ORTHO05D000031 3.9e-07 58.2 63 44.4
Hund12686 Selenicereus undatus HOM05D000030 ORTHO05D000009 3.9e-07 58.2 55 49.1
Hund14758 Selenicereus undatus HOM05D000030 ORTHO05D000031 3.9e-07 58.2 55 47.3
Hund20102 Selenicereus undatus HOM05D000030 ORTHO05D000031 3.9e-07 58.2 63 44.4
Hund25690 Selenicereus undatus HOM05D000030 ORTHO05D000009 3.9e-07 58.2 63 44.4
CARHR006310 Cardamine hirsuta HOM05D000030 ORTHO05D000031 5.0e-07 57.8 48 62.5
AUR62033518 Chenopodium quinoa HOM05D001892 ORTHO05D001826 5.0e-07 57.8 54 51.9
Dinv03813 Davidia involucrata HOM05D000030 ORTHO05D000031 6.6e-07 57.4 65 41.5
FvH4_6g47670 Fragaria vesca HOM05D000030 ORTHO05D000009 6.6e-07 57.4 65 46.2
Glyma.07G138700 Glycine max HOM05D000030 ORTHO05D000009 6.6e-07 57.4 53 54.7
HanXRQChr03g0074851 Helianthus annuus HOM05D000030 ORTHO05D000009 6.6e-07 57.4 48 56.2
MBI15_g45660_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 6.6e-07 57.4 69 44.9
SHI17276 Sapria himalayana HOM05D000030 ORTHO05D000009 6.6e-07 57.4 50 54.0
SHI21952 Sapria himalayana HOM05D000030 ORTHO05D000031 6.6e-07 57.4 50 56.0
Hund23876 Selenicereus undatus HOM05D000030 ORTHO05D000031 6.6e-07 57.4 58 46.6
ECA232G1081 Erigeron canadensis HOM05D000030 ORTHO05D000009 8.6e-07 57.0 79 40.5
ECA234G3927 Erigeron canadensis HOM05D000030 ORTHO05D000009 8.6e-07 57.0 79 40.5
ECA240G3204 Erigeron canadensis HOM05D000030 ORTHO05D000009 8.6e-07 57.0 79 40.5
Rhsim05G0096700 Rhododendron simsii HOM05D002753 ORTHO05D003097 8.6e-07 57.0 80 40.0
Rhsim09G0036100 Rhododendron simsii HOM05D000447 ORTHO05D000009 8.6e-07 57.0 77 40.3
Hund01687 Selenicereus undatus HOM05D000030 ORTHO05D000009 8.6e-07 57.0 63 44.4
Sopen08g014440 Solanum pennellii HOM05D000030 ORTHO05D000009 8.6e-07 57.0 58 50.0
CARHR287660 Cardamine hirsuta HOM05D000030 ORTHO05D000031 1.1e-06 56.6 78 43.6
Hma1.2p1_0083F.1_g042690 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 1.1e-06 56.6 50 52.0
Hund11149 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.1e-06 56.6 63 42.9
Hund20583 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.1e-06 56.6 55 45.5
EL10Ac6g14359 Beta vulgaris HOM05D000030 ORTHO05D000031 1.5e-06 56.2 48 52.1
AUR62019636 Chenopodium quinoa HOM05D000030 ORTHO05D012197 1.5e-06 56.2 48 54.2
AUR62040832 Chenopodium quinoa HOM05D000030 ORTHO05D012197 1.5e-06 56.2 51 49.0
FvH4_4g06652 Fragaria vesca HOM05D004580 ORTHO05D000031 1.5e-06 56.2 68 45.6
Hund15869 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.5e-06 56.2 76 40.8
Hund26034 Selenicereus undatus HOM05D000030 ORTHO05D000031 1.5e-06 56.2 48 54.2
Hund30261 Selenicereus undatus HOM05D000030 ORTHO05D000031 1.5e-06 56.2 63 44.4
Hund30264 Selenicereus undatus HOM05D000030 ORTHO05D000031 1.5e-06 56.2 63 44.4
TPR.G2229 Trifolium pratense HOM05D000030 ORTHO05D000009 1.5e-06 56.2 65 43.1
A10p03190 Brassica napus HOM05D000030 ORTHO05D000031 1.9e-06 55.8 66 45.5
MBI11_g18031_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 1.9e-06 55.8 48 56.2
QL02p074905 Quercus lobata HOM05D000030 ORTHO05D000009 1.9e-06 55.8 50 50.0
QL03p018711 Quercus lobata HOM05D000030 ORTHO05D000009 1.9e-06 55.8 50 50.0
QL03p065377 Quercus lobata HOM05D000030 ORTHO05D000009 1.9e-06 55.8 50 50.0
Rhsim03G0020200 Rhododendron simsii HOM05D000030 ORTHO05D000031 1.9e-06 55.8 47 53.2
Rhsim03G0206300 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.9e-06 55.8 47 53.2
Rhsim04G0181200 Rhododendron simsii HOM05D000030 ORTHO05D000031 1.9e-06 55.8 47 53.2
Rhsim10G0081100 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.9e-06 55.8 47 53.2
Hund24267 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.9e-06 55.8 63 42.9
Aqoxy2G01304 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 2.5e-06 55.5 48 47.9
Aqoxy52s007 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 2.5e-06 55.5 48 47.9
Aqoxy6G02576 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 2.5e-06 55.5 54 44.4
COL.COLO4_37926 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.5e-06 55.5 56 50.0
Nitab4.5_0005580g0030 Nicotiana tabacum HOM05D000030 ORTHO05D000031 2.5e-06 55.5 65 47.7
QL02p050212 Quercus lobata HOM05D000030 ORTHO05D000031 2.5e-06 55.5 61 49.2
TPR.G2240 Trifolium pratense HOM05D000030 ORTHO05D000009 2.5e-06 55.5 70 41.4
Gorai.001G220000 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.3e-06 55.1 48 52.1
MBI05_g01278_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 3.3e-06 55.1 62 46.8
MBI18_g04724_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D000031 3.3e-06 55.1 62 46.8
QL01p042188 Quercus lobata HOM05D000030 ORTHO05D000031 3.3e-06 55.1 48 47.9
Sopen03g016240 Solanum pennellii HOM05D000030 ORTHO05D000031 3.3e-06 55.1 64 42.2
ECA234G2824 Erigeron canadensis HOM05D000030 ORTHO05D000031 4.3e-06 54.7 79 39.2
ECA247G0224 Erigeron canadensis HOM05D000030 ORTHO05D000031 4.3e-06 54.7 52 51.9
MBI05_g05613_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 4.3e-06 54.7 62 46.8
MBI07_g02208_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 4.3e-06 54.7 62 46.8
MBI16_g09819_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 4.3e-06 54.7 45 57.8
MBI19_g21655_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 4.3e-06 54.7 48 56.2
SHI18871 Sapria himalayana HOM05D000030 ORTHO05D000009 4.3e-06 54.7 48 58.3
Hund08783 Selenicereus undatus HOM05D000030 ORTHO05D000031 4.3e-06 54.7 76 40.8
Hund10837 Selenicereus undatus HOM05D000030 ORTHO05D000031 4.3e-06 54.7 76 42.1
Hund11637 Selenicereus undatus HOM05D000030 ORTHO05D000031 4.3e-06 54.7 63 41.3
SHI03637 Sapria himalayana HOM05D000030 ORTHO05D000031 5.6e-06 54.3 48 52.1
Hund10949 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.6e-06 54.3 48 50.0
Hund26017 Selenicereus undatus HOM05D000030 ORTHO05D000031 5.6e-06 54.3 55 43.6
TPR.G2198 Trifolium pratense HOM05D000030 ORTHO05D000009 5.6e-06 54.3 58 48.3
Aqoxy2G02219 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 7.3e-06 53.9 58 41.4
BolC4t24561H Brassica oleracea HOM05D040264 ORTHO05D033724 7.3e-06 53.9 46 56.5
MBI06_g38079_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 7.3e-06 53.9 58 46.6
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 7.3e-06 53.9 66 43.9
Rhsim02G0184700 Rhododendron simsii HOM05D000030 ORTHO05D000031 7.3e-06 53.9 45 51.1
SHI17058 Sapria himalayana HOM05D000030 ORTHO05D000031 7.3e-06 53.9 54 53.7
Hund12458 Selenicereus undatus HOM05D000030 ORTHO05D000009 7.3e-06 53.9 63 41.3
Aqoxy7G02382 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 9.5e-06 53.5 58 41.4
Duzib128G1005 Durio zibethinus HOM05D000030 ORTHO05D000009 9.5e-06 53.5 48 54.2
FvH4_4g08801 Fragaria vesca HOM05D000030 ORTHO05D000031 9.5e-06 53.5 60 46.7
Hma1.2p1_0321F.1_g124180 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.5e-06 53.5 50 48.0
Nitab4.5_0000016g0270 Nicotiana tabacum HOM05D000030 ORTHO05D000031 9.5e-06 53.5 86 36.0
Oeu064851.1 Olea europaea HOM05D000030 ORTHO05D000031 9.5e-06 53.5 45 53.3
Peaxi162Scf00500g00011 Petunia axillaris HOM05D000030 ORTHO05D000031 9.5e-06 53.5 60 48.3
Hund15647 Selenicereus undatus HOM05D000030 ORTHO05D000031 9.5e-06 53.5 66 40.9
Hund25665 Selenicereus undatus HOM05D000030 ORTHO05D000009 9.5e-06 53.5 63 42.9
TPR.G23203 Trifolium pratense HOM05D000030 ORTHO05D000009 9.5e-06 53.5 47 53.2


User provided reference genes

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