Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-38 160.2 74 100.0
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-34 146.4 74 93.2
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 90.5
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 90.5
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 90.5
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 9.9e-33 142.9 74 90.5
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-32 142.1 74 90.5
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-32 141.7 74 89.2
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-32 141.7 74 91.9
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-32 141.0 74 89.2
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 89.2
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-32 139.8 74 90.5
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.4e-31 139.0 74 90.5
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-31 139.0 74 90.5
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-31 138.3 74 87.8
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 2.4e-31 138.3 74 89.2
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-31 137.9 69 92.8
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-31 136.7 71 91.5
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-31 136.7 71 91.5
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-30 133.7 74 86.5
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 7.8e-30 133.3 72 88.9
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 7.8e-30 133.3 74 86.5
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 1.0e-29 132.9 74 86.5
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 1.0e-29 132.9 74 86.5
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 1.0e-29 132.9 74 86.5
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 1.0e-29 132.9 74 86.5
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.0e-29 132.9 74 86.5
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.0e-29 132.9 74 86.5
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-29 132.9 72 87.5
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-29 132.9 69 91.3
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-29 132.9 69 91.3
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 1.0e-29 132.9 74 86.5
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.3e-29 132.5 74 85.1
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-29 132.5 71 88.7
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.7e-29 132.1 74 86.5
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.7e-29 132.1 74 86.5
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.7e-29 132.1 74 86.5
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.7e-29 132.1 74 86.5
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 2.3e-29 131.7 74 85.1
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 2.3e-29 131.7 74 85.1
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-29 131.3 74 85.1
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-29 131.3 74 85.1
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-29 131.0 74 85.1
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 5.1e-29 130.6 74 85.1
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-29 130.6 74 86.5
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 6.6e-29 130.2 74 85.1
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 6.6e-29 130.2 74 85.1
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-29 130.2 70 88.6
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-29 129.8 68 89.7
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 8.7e-29 129.8 74 85.1
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 85.1
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.9e-28 128.6 74 83.8
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 1.9e-28 128.6 74 83.8
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.9e-28 128.6 74 83.8
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 1.9e-28 128.6 74 83.8
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 1.9e-28 128.6 74 83.8
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 3.3e-28 127.9 71 85.9
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 3.3e-28 127.9 74 83.8
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 3.3e-28 127.9 74 83.8
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 4.3e-28 127.5 74 83.8
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 4.3e-28 127.5 74 83.8
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 5.6e-28 127.1 74 83.8
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-28 127.1 71 85.9
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 9.6e-28 126.3 72 84.7
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 9.6e-28 126.3 72 84.7
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 9.6e-28 126.3 68 89.7
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 1.3e-27 125.9 74 81.1
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.6e-27 125.6 74 81.1
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.1e-27 125.2 74 82.4
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 2.1e-27 125.2 74 82.4
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 2.1e-27 125.2 74 82.4
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 2.1e-27 125.2 74 82.4
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 2.1e-27 125.2 74 82.4
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.8e-27 124.8 72 83.3
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 3.6e-27 124.4 68 86.8
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 4.8e-27 124.0 74 82.4
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 4.8e-27 124.0 74 82.4
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 6.2e-27 123.6 72 83.3
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.1e-27 123.2 72 83.3
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.1e-27 123.2 72 83.3
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 8.1e-27 123.2 69 85.5
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 8.1e-27 123.2 69 85.5
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.1e-27 123.2 72 80.6
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 8.1e-27 123.2 69 85.5
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 8.1e-27 123.2 69 85.5
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-26 122.9 71 83.1
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 1.4e-26 122.5 69 85.5
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-26 122.5 69 85.5
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.1e-26 121.3 67 80.6
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-26 120.9 69 85.5
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-26 120.6 74 81.1
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.2e-25 119.4 69 82.6
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.2e-25 119.4 69 82.6
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.2e-25 119.4 69 82.6
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 1.2e-25 119.4 69 82.6
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-25 117.9 72 81.9
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.6e-25 116.7 74 75.7
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 7.8e-22 106.7 63 82.5
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 5.1e-21 104.0 57 86.0
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-21 103.6 52 92.3
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.5e-20 102.4 56 82.1
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-20 101.7 52 92.3
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 9.6e-20 99.8 69 66.7
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.6e-19 99.0 68 67.6
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 2.8e-19 98.2 58 82.8
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-17 91.3 47 89.4
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 9.9e-17 89.7 46 91.3
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 6.4e-16 87.0 49 83.7
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-16 86.7 45 88.9
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 1.1e-15 86.3 57 75.4
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-15 85.1 45 88.9
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 3.2e-15 84.7 48 85.4
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.1e-14 82.0 47 80.9
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.0e-13 79.7 48 81.2
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.7e-13 77.0 44 81.8
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-11 71.6 35 94.3
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-11 71.6 35 94.3
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 8.1e-11 70.1 37 86.5
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-10 69.3 48 70.8
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-10 67.8 35 88.6
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-10 67.4 34 91.2
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-10 67.4 37 83.8
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-09 65.5 34 88.2
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.4e-09 64.7 50 64.0
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 7.6e-09 63.5 29 96.6
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 1.3e-08 62.8 39 76.9
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 2.2e-08 62.0 71 43.7
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 3.8e-08 61.2 33 81.8
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-08 60.1 30 86.7
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 4.6e-06 54.3 31 80.6


User provided reference genes

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