Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34339 Sapria himalayana HOM05D014003 ORTHO05D016381 1.2e-208 729.6 362 100.0
SHI33553 Sapria himalayana HOM05D014003 ORTHO05D016381 1.1e-108 397.5 357 61.1
SHI29737 Sapria himalayana HOM05D014003 ORTHO05D016381 4.2e-68 262.7 196 66.8
SHI19390 Sapria himalayana HOM05D014003 ORTHO05D016381 6.9e-55 218.8 298 45.6
SHI19950 Sapria himalayana HOM05D003107 ORTHO05D003092 4.0e-34 149.8 103 76.7
SHI25702 Sapria himalayana HOM05D014003 ORTHO05D016381 3.1e-23 113.6 97 64.9
SHI16427 Sapria himalayana HOM05D014003 ORTHO05D016381 9.5e-20 102.1 104 54.8
SHI16426 Sapria himalayana HOM05D003107 ORTHO05D003092 2.1e-19 100.9 75 77.3
Potri.T125307 Populus trichocarpa HOM05D003107 ORTHO05D003092 6.1e-19 99.4 357 30.3
Manes.06G046500 Manihot esculenta HOM05D003107 ORTHO05D003092 1.0e-18 98.6 358 29.9
Potri.018G125500 Populus trichocarpa HOM05D003107 ORTHO05D003092 1.0e-18 98.6 357 30.3
SHI16428 Sapria himalayana HOM05D014003 ORTHO05D016381 5.2e-18 96.3 65 72.3
Thecc.09G133300 Theobroma cacao HOM05D003107 ORTHO05D003092 5.2e-18 96.3 378 27.5
Dinv41472 Davidia involucrata HOM05D003107 ORTHO05D003092 1.2e-17 95.1 414 26.8
SHI19949 Sapria himalayana HOM05D014003 ORTHO05D016381 2.8e-16 90.5 76 64.5
Duzib187G1951 Durio zibethinus HOM05D003107 ORTHO05D003092 2.7e-14 84.0 389 27.5
Sabra18G0106800 Salix brachista HOM05D003107 ORTHO05D003092 1.0e-13 82.0 342 27.5
QL02p089967 Quercus lobata HOM05D003107 ORTHO05D003092 2.9e-13 80.5 403 27.5
SHI41186 Sapria himalayana HOM05D009561 ORTHO05D003092 2.5e-12 77.4 105 45.7
SHI09800 Sapria himalayana HOM05D003107 ORTHO05D003092 5.6e-12 76.3 50 70.0
Gohir.A06G053600 Gossypium hirsutum HOM05D003107 ORTHO05D003092 2.8e-11 73.9 309 25.2
CiPaw.03G248900 Carya illinoinensis HOM05D003107 ORTHO05D003092 8.0e-11 72.4 418 26.1
CSS0017448 Camellia sinensis var. sinensis HOM05D009561 ORTHO05D003092 1.0e-10 72.0 317 25.9
Nitab4.5_0003393g0030 Nicotiana tabacum HOM05D009561 ORTHO05D003092 2.3e-10 70.9 315 26.0
SHI25701 Sapria himalayana HOM05D014003 ORTHO05D003092 6.8e-10 69.3 93 51.6
CAN.G763.8 Capsicum annuum HOM05D009561 ORTHO05D003092 1.2e-09 68.6 412 26.7
Cfa002924 Carpinus fangiana HOM05D003107 ORTHO05D003092 1.2e-09 68.6 256 29.3
Gohir.D06G052900 Gossypium hirsutum HOM05D003107 ORTHO05D003092 1.5e-09 68.2 315 26.3
Nitab4.5_0000374g0120 Nicotiana tabacum HOM05D009561 ORTHO05D003092 2.0e-09 67.8 391 24.8
Peaxi162Scf00088g01215 Petunia axillaris HOM05D009561 ORTHO05D003092 3.4e-09 67.0 406 27.1
Nn8g39562 Nelumbo nucifera HOM05D003107 ORTHO05D003092 9.8e-09 65.5 353 26.1
Cpa.g.sc46.47 Carica papaya HOM05D003107 ORTHO05D003092 2.2e-08 64.3 243 30.0
Gorai.010G061400 Gossypium raimondii HOM05D003107 ORTHO05D003092 2.9e-08 63.9 241 29.0
Actinidia07321 Actinidia chinensis HOM05D003107 ORTHO05D003092 6.4e-08 62.8 374 22.7
Rhsim01G0061100 Rhododendron simsii HOM05D003107 ORTHO05D003092 6.4e-08 62.8 324 24.7
vmacro07728 Vaccinium macrocarpon HOM05D003107 ORTHO05D003092 6.4e-08 62.8 332 23.2
GSVIVG01015600001 Vitis vinifera HOM05D009561 ORTHO05D003092 1.9e-07 61.2 272 26.1
CSS0015137 Camellia sinensis var. sinensis HOM05D009561 ORTHO05D003092 2.4e-07 60.8 363 21.5
ATR0800G121 Amborella trichopoda HOM05D003107 ORTHO05D003092 7.0e-07 59.3 41 58.5
Haze_25496 Corylus avellana HOM05D009561 ORTHO05D003092 7.0e-07 59.3 114 36.8
Sc18g0000310 Simmondsia chinensis HOM05D003107 ORTHO05D003092 7.0e-07 59.3 318 24.5
CDE04G1135 Ceratophyllum demersum HOM05D003107 ORTHO05D003092 2.0e-06 57.8 90 37.8
TAR636G3294 Trochodendron aralioides HOM05D003107 ORTHO05D003092 2.0e-06 57.8 120 37.5
ECA234G1222 Erigeron canadensis HOM05D003107 ORTHO05D003092 2.7e-06 57.4 293 26.3
HPP92_010519 Vanilla planifolia HOM05D003107 ORTHO05D003092 4.6e-06 56.6 81 42.0
Lalb_Chr08g0234601 Lupinus albus HOM05D003107 ORTHO05D003092 6.0e-06 56.2 410 23.7


User provided reference genes

Program Settings