Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34332 Sapria himalayana HOM05D000004 ORTHO05D000002 8.7e-41 169.9 85 100.0
SHI14899 Sapria himalayana HOM05D000004 ORTHO05D000378 1.5e-21 105.9 91 64.8
SHI30396 Sapria himalayana HOM05D003769 ORTHO05D000002 5.5e-19 97.4 90 58.9
Sopen02g011110 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-17 91.7 103 46.6
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 5.7e-16 87.4 125 43.2
Sopen02g010300 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-16 87.0 103 45.6
SHI35607 Sapria himalayana HOM05D000004 ORTHO05D000002 3.7e-15 84.7 78 62.8
CSS0003422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-14 81.3 90 47.8
CSS0009919 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-13 79.7 90 47.8
Sopen05g005120 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-13 79.0 125 37.6
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-13 78.6 125 37.6
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 3.4e-13 78.2 125 38.4
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 3.4e-13 78.2 125 38.4
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 3.4e-13 78.2 125 38.4
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 3.4e-13 78.2 125 38.4
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 3.4e-13 78.2 125 38.4
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 4.5e-13 77.8 125 38.4
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-13 77.4 106 43.4
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-13 77.0 125 36.0
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 7.7e-13 77.0 125 36.0
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-12 76.6 122 38.5
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-12 76.6 124 37.1
Sopen10g014200 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-12 76.6 91 45.1
Sopen08g011270 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-12 76.3 91 42.9
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-12 75.9 125 37.6
Sopen02g009190 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-12 75.9 125 36.8
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 1.7e-12 75.9 125 36.0
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-12 75.1 125 35.2
Sopen02g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-12 75.1 125 37.6
Sopen12g011100 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-12 74.7 91 42.9
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 3.8e-12 74.7 125 35.2
Sopen06g011880 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-12 74.3 124 37.1
Sopen05g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-12 73.9 125 35.2
Sopen12g008510 Solanum pennellii HOM05D000691 ORTHO05D000378 6.5e-12 73.9 91 42.9
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 8.5e-12 73.6 124 35.5
SpUn0451_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 8.5e-12 73.6 90 47.8
PGSC0003DMG400000388 Solanum tuberosum HOM05D000004 ORTHO05D000002 8.5e-12 73.6 91 42.9
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 1.4e-11 72.8 124 35.5
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 2.5e-11 72.0 124 34.7
Sopen09g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-11 72.0 125 35.2
SHI25081 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-11 71.6 72 58.3
SHI27517 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-11 71.6 78 56.4
Sopen08g015760 Solanum pennellii HOM05D000004 ORTHO05D000378 3.2e-11 71.6 72 52.8
Rhsim10G0189700 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.2e-11 71.2 126 35.7
SHI21457 Sapria himalayana HOM05D000004 ORTHO05D000002 4.2e-11 71.2 79 55.7
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-11 71.2 122 34.4
EL10As7g23739 Beta vulgaris HOM05D000004 ORTHO05D000002 5.5e-11 70.9 82 47.6
CSS0013920 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.5e-11 70.9 126 36.5
SHI23100 Sapria himalayana HOM05D000004 ORTHO05D000002 5.5e-11 70.9 73 57.5
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-11 70.9 91 44.0
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-11 70.9 91 40.7
Sopen01g024770 Solanum pennellii HOM05D000691 ORTHO05D000378 9.4e-11 70.1 90 42.2
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 9.4e-11 70.1 125 35.2
ClCG10G007950 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.2e-10 69.7 125 38.4
SHI15815 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-10 69.7 100 45.0
Sopen01g021200 Solanum pennellii HOM05D000004 ORTHO05D000378 1.2e-10 69.7 91 40.7
Sopen07g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-10 69.3 91 40.7
CSS0034382 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-10 68.9 126 35.7
Sopen04g009170 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-10 68.9 91 40.7
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-10 68.2 122 36.9
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 3.6e-10 68.2 91 40.7
CSS0009193 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.6e-10 67.8 126 34.9
Sopen02g006790 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-10 67.8 101 40.6
Sopen07g006750 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-10 67.8 88 39.8
Sopen09g014170 Solanum pennellii HOM05D000691 ORTHO05D000378 4.6e-10 67.8 91 40.7
CsaV3_5G014110 Cucumis sativus L. HOM05D003698 ORTHO05D004320 6.1e-10 67.4 85 48.2
Sp7g07390 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.1e-10 67.4 90 45.6
Sopen01g009130 Solanum pennellii HOM05D000691 ORTHO05D000378 7.9e-10 67.0 91 40.7
Sopen06g004710 Solanum pennellii HOM05D000004 ORTHO05D000378 7.9e-10 67.0 91 42.9
THA.LOC104816062 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.9e-10 67.0 88 44.3
Sopen10g015090 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-09 66.6 114 35.1
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-09 66.2 109 36.7
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 1.4e-09 66.2 124 33.9
RcHm_v2.0_Chr7g0200201 Rosa chinensis HOM05D000004 ORTHO05D000002 1.4e-09 66.2 122 34.4
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 1.8e-09 65.9 87 43.7
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 1.8e-09 65.9 87 43.7
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 1.8e-09 65.9 87 43.7
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 1.8e-09 65.9 87 43.7
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 1.8e-09 65.9 104 41.3
SHI30591 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-09 65.9 101 42.6
Sopen11g024700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-09 65.9 89 39.3
SHI32724 Sapria himalayana HOM05D000004 ORTHO05D000002 2.3e-09 65.5 67 56.7
Sopen05g011350 Solanum pennellii HOM05D000004 ORTHO05D000378 3.0e-09 65.1 91 39.6
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 3.9e-09 64.7 87 42.5
Ah.14g080150 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.1e-09 64.3 117 36.8
CSS0006424 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.1e-09 64.3 92 40.2
Sp7g09270 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.7e-09 63.9 95 44.2
EL10Ac9g20976 Beta vulgaris HOM05D000004 ORTHO05D000002 8.8e-09 63.5 104 37.5
Sopen03g024480 Solanum pennellii HOM05D000004 ORTHO05D000002 8.8e-09 63.5 125 32.8
Sopen04g014740 Solanum pennellii HOM05D000004 ORTHO05D000002 8.8e-09 63.5 89 39.3
SHI22221 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-08 63.2 70 50.0
SHI24697 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-08 63.2 57 59.6
SHI27591 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-08 63.2 62 61.3
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-08 63.2 115 33.9
FvH4_1g23712 Fragaria vesca HOM05D000004 ORTHO05D000002 1.5e-08 62.8 89 39.3
CSS0010412 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-08 62.4 92 40.2
Sopen02g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-08 62.0 80 41.2
Sopen12g015730 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-08 62.0 125 32.8
Ah.15g100080 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.3e-08 61.6 76 44.7
Sopen04g026810 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-08 61.6 126 33.3
Sopen02g009460 Solanum pennellii HOM05D000691 ORTHO05D000378 4.3e-08 61.2 80 41.2
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-08 61.2 126 33.3
Sp4g06750 Schrenkiella parvula HOM05D000004 ORTHO05D000002 5.7e-08 60.8 93 38.7
Sopen01g016830 Solanum pennellii HOM05D000691 ORTHO05D000378 5.7e-08 60.8 91 35.2
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-08 60.8 92 39.1
SEGI_07720 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.4e-08 60.5 103 35.0
Sopen02g009180 Solanum pennellii HOM05D000004 ORTHO05D000002 9.7e-08 60.1 84 41.7
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 59.3 92 39.1
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.9 92 39.1
SHI03396 Sapria himalayana HOM05D000004 ORTHO05D000002 2.8e-07 58.5 72 50.0
SHI33114 Sapria himalayana HOM05D000004 ORTHO05D000002 2.8e-07 58.5 58 55.2
EL10Ac9g20846 Beta vulgaris HOM05D000004 ORTHO05D000002 3.7e-07 58.2 126 31.0
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 3.7e-07 58.2 126 31.7
SEGI_15568 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.7e-07 58.2 123 32.5
Sopen03g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-07 58.2 92 39.1
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-07 58.2 92 38.0
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 93 35.5
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 92 38.0
Sopen02g011330 Solanum pennellii HOM05D000004 ORTHO05D008835 8.2e-07 57.0 80 38.8
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-07 57.0 126 33.3
Rhsim02G0166800 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.1e-06 56.6 105 38.1
SHI06328 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-06 56.6 66 50.0
SHI33113 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-06 56.6 32 87.5
Sopen08g005590 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 56.6 126 31.7
SHI07586 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-06 56.2 41 70.7
Sopen08g015300 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 56.2 92 38.0
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-06 55.8 126 31.7
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-06 55.8 126 32.5
Sopen08g004730 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-06 55.8 75 40.0
EL10As7g23735 Beta vulgaris HOM05D000004 ORTHO05D000002 2.4e-06 55.5 44 56.8
SEGI_21685 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.1e-06 55.1 123 30.9
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-06 55.1 126 31.0
Sopen10g017950 Solanum pennellii HOM05D000014 ORTHO05D000016 3.1e-06 55.1 121 31.4
Sopen08g009080 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-06 54.7 97 37.1
SHI27205 Sapria himalayana HOM05D000004 ORTHO05D002065 5.3e-06 54.3 32 78.1
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 5.3e-06 54.3 92 37.0
Sopen11g019750 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-06 53.9 92 37.0
CSS0007734 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.1e-06 53.5 35 77.1
SHI27144 Sapria himalayana HOM05D000004 ORTHO05D000002 9.1e-06 53.5 60 55.0


User provided reference genes

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