Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34261 Sapria himalayana HOM05D004596 ORTHO05D005853 3.3e-56 221.9 147 100.0
SHI07929 Sapria himalayana HOM05D004596 ORTHO05D005853 8.0e-34 147.5 86 77.9
Nn6g34173 Nelumbo nucifera HOM05D004596 ORTHO05D005853 1.7e-31 139.8 86 70.9
TAR362G0583 Trochodendron aralioides HOM05D004596 ORTHO05D005853 6.3e-31 137.9 86 73.3
Gohir.A10G117700 Gossypium hirsutum HOM05D004596 ORTHO05D005853 8.2e-31 137.5 86 70.9
Gohir.D10G149100 Gossypium hirsutum HOM05D004596 ORTHO05D005853 8.2e-31 137.5 86 70.9
Gorai.011G166400 Gossypium raimondii HOM05D004596 ORTHO05D005853 8.2e-31 137.5 86 70.9
Sc13g0004790 Simmondsia chinensis HOM05D004596 ORTHO05D005853 1.1e-30 137.1 87 69.0
Dinv44581 Davidia involucrata HOM05D004596 ORTHO05D005853 1.8e-30 136.3 86 68.6
Thhalv10006614m.g Eutrema salsugineum HOM05D004596 ORTHO05D005853 1.8e-30 136.3 86 70.9
QL06p000822 Quercus lobata HOM05D004596 ORTHO05D005853 2.4e-30 136.0 86 67.4
Thecc.04G239700 Theobroma cacao HOM05D004596 ORTHO05D005853 2.4e-30 136.0 86 69.8
Cpa.g.sc44.129 Carica papaya HOM05D004596 ORTHO05D005853 3.1e-30 135.6 86 69.8
Oeu064241.3 Olea europaea HOM05D004596 ORTHO05D005853 3.1e-30 135.6 86 67.4
GSVIVG01018052001 Vitis vinifera HOM05D004596 ORTHO05D005853 3.1e-30 135.6 86 68.6
Ciclev10004189m.g Citrus clementina HOM05D004596 ORTHO05D005853 4.1e-30 135.2 86 69.8
COL.COLO4_21575 Corchorus olitorius HOM05D004596 ORTHO05D005853 4.1e-30 135.2 86 70.9
Atru.chr4.2330 Acer truncatum HOM05D004596 ORTHO05D005853 5.3e-30 134.8 86 68.6
CANSAT78G0708 Cannabis sativa HOM05D004596 ORTHO05D005853 5.3e-30 134.8 86 69.8
Hma1.2p1_0549F.1_g177070 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 5.3e-30 134.8 86 69.8
Hma1.2p1_0549F.1_g177080 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 5.3e-30 134.8 86 69.8
Hma1.2p1_1311F.1_g274870 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 5.3e-30 134.8 86 69.8
Manes.15G033300 Manihot esculenta HOM05D004596 ORTHO05D005853 5.3e-30 134.8 86 68.6
TAR633G0587 Trochodendron aralioides HOM05D004596 ORTHO05D005853 5.3e-30 134.8 86 69.8
Duzib151G0659 Durio zibethinus HOM05D004596 ORTHO05D005853 7.0e-30 134.4 86 69.8
Eucgr.B00983 Eucalyptus grandis HOM05D004596 ORTHO05D005853 9.1e-30 134.0 86 67.4
SHI23426 Sapria himalayana HOM05D004596 ORTHO05D005853 1.2e-29 133.7 92 68.5
MD16G1200600 Malus domestica HOM05D004596 ORTHO05D005853 1.6e-29 133.3 86 67.4
AUR62038647 Chenopodium quinoa HOM05D004596 ORTHO05D005853 2.0e-29 132.9 87 65.5
ClCG05G004810 Citrullus lanatus HOM05D004596 ORTHO05D005853 2.0e-29 132.9 86 72.1
CsaV3_3G012850 Cucumis sativus L. HOM05D004596 ORTHO05D005853 2.0e-29 132.9 86 70.9
Sp1g03030 Schrenkiella parvula HOM05D004596 ORTHO05D005853 2.0e-29 132.9 86 69.8
TWI73G0280 Tripterygium wilfordii HOM05D004596 ORTHO05D005853 2.0e-29 132.9 86 67.4
FvH4_4g01620 Fragaria vesca HOM05D004596 ORTHO05D005853 2.7e-29 132.5 86 67.4
FAN22G0929 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.7e-29 132.5 86 67.4
Potri.010G081400 Populus trichocarpa HOM05D004596 ORTHO05D005853 2.7e-29 132.5 86 68.6
RcHm_v2.0_Chr4g0388191 Rosa chinensis HOM05D004596 ORTHO05D005853 2.7e-29 132.5 86 67.4
AT1G04210 Arabidopsis thaliana HOM05D004596 ORTHO05D005853 3.5e-29 132.1 86 69.8
Ah.13g071800 Amaranthus hybridus HOM05D004596 ORTHO05D005853 4.5e-29 131.7 87 65.5
Aqoxy2G03471 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 4.5e-29 131.7 88 68.2
Carub.0001s0340 Capsella rubella HOM05D004596 ORTHO05D005853 4.5e-29 131.7 86 69.8
AUR62042985 Chenopodium quinoa HOM05D004596 ORTHO05D005853 4.5e-29 131.7 87 65.5
Actinidia04506 Actinidia chinensis HOM05D004596 ORTHO05D005853 5.9e-29 131.3 86 66.3
Actinidia40113 Actinidia chinensis HOM05D004596 ORTHO05D005853 5.9e-29 131.3 86 66.3
Cfa008428 Carpinus fangiana HOM05D004596 ORTHO05D005853 5.9e-29 131.3 86 67.4
Haze_11239 Corylus avellana HOM05D004596 ORTHO05D005853 5.9e-29 131.3 86 67.4
MELO3C006495.2 Cucumis melo HOM05D004596 ORTHO05D005853 5.9e-29 131.3 86 70.9
FAN12G2122 Fragaria x ananassa HOM05D004596 ORTHO05D005853 5.9e-29 131.3 86 67.4
HanXRQChr10g0294771 Helianthus annuus HOM05D004596 ORTHO05D005853 5.9e-29 131.3 86 66.3
PGSC0003DMG400030169 Solanum tuberosum HOM05D004596 ORTHO05D005853 5.9e-29 131.3 86 67.4
CiPaw.01G194700 Carya illinoinensis HOM05D004596 ORTHO05D005853 7.7e-29 131.0 86 66.3
THA.LOC104826066 Tarenaya hassleriana HOM05D004596 ORTHO05D005853 1.0e-28 130.6 88 68.2
A10p02640 Brassica napus HOM05D004596 ORTHO05D005853 1.3e-28 130.2 87 70.1
CARHR003540 Cardamine hirsuta HOM05D004596 ORTHO05D005853 1.3e-28 130.2 86 68.6
Prupe.1G022600 Prunus persica HOM05D004596 ORTHO05D005853 1.3e-28 130.2 86 65.1
BcaC05g24461 Brassica carinata HOM05D004596 ORTHO05D005853 1.7e-28 129.8 87 69.0
C05p02420 Brassica napus HOM05D004596 ORTHO05D005853 1.7e-28 129.8 87 69.0
BolC5t29021H Brassica oleracea HOM05D004596 ORTHO05D005853 1.7e-28 129.8 87 69.0
BraA10t42531Z Brassica rapa HOM05D004596 ORTHO05D005853 1.7e-28 129.8 87 69.0
FAN17G0661 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.7e-28 129.8 86 67.4
Sopen09g031650 Solanum pennellii HOM05D004596 ORTHO05D005853 1.7e-28 129.8 86 66.3
Sabra10G0061500 Salix brachista HOM05D004596 ORTHO05D005853 2.2e-28 129.4 86 66.3
AL1G13810 Arabidopsis lyrata HOM05D004596 ORTHO05D005853 2.9e-28 129.0 86 68.6
MD13G1201100 Malus domestica HOM05D004596 ORTHO05D005853 2.9e-28 129.0 86 64.0
Thecc.08G085900 Theobroma cacao HOM05D004596 ORTHO05D005853 2.9e-28 129.0 85 68.2
EL10Ac3g06528 Beta vulgaris HOM05D004596 ORTHO05D005853 3.8e-28 128.6 87 64.4
MBI11_g37065_MAGBIO Magnolia biondii HOM05D004596 ORTHO05D005853 3.8e-28 128.6 86 64.0
Nitab4.5_0002652g0030 Nicotiana tabacum HOM05D004596 ORTHO05D005853 3.8e-28 128.6 86 65.1
Solyc09g082800.3 Solanum lycopersicum HOM05D004596 ORTHO05D005853 3.8e-28 128.6 86 66.3
Lj3C724G8 Lonicera japonica HOM05D004596 ORTHO05D005853 5.0e-28 128.3 86 66.3
Aa31LG1G20620 Aethionema arabicum HOM05D004596 ORTHO05D005853 6.5e-28 127.9 87 64.4
BraA09t42132Z Brassica rapa HOM05D004596 ORTHO05D005853 6.5e-28 127.9 87 67.8
DCAR_024187 Daucus carota HOM05D004596 ORTHO05D005853 6.5e-28 127.9 86 66.3
vmacro08381 Vaccinium macrocarpon HOM05D004596 ORTHO05D005853 6.5e-28 127.9 86 64.0
Nitab4.5_0000224g0010 Nicotiana tabacum HOM05D004596 ORTHO05D005853 8.5e-28 127.5 86 65.1
CAN.G1435.8 Capsicum annuum HOM05D004596 ORTHO05D005853 1.1e-27 127.1 86 65.1
PGR142G3885 Punica granatum HOM05D004596 ORTHO05D005853 1.1e-27 127.1 87 64.4
SHI23050 Sapria himalayana HOM05D004596 ORTHO05D005853 1.1e-27 127.1 73 78.1
Sed0001129 Sechium edule HOM05D004596 ORTHO05D005853 1.1e-27 127.1 86 68.6
Aqoxy7G01427 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 1.5e-27 126.7 88 63.6
CSS0040136 Camellia sinensis var. sinensis HOM05D004596 ORTHO05D005853 1.9e-27 126.3 86 65.1
Peaxi162Scf00316g00026 Petunia axillaris HOM05D004596 ORTHO05D005853 1.9e-27 126.3 86 64.0
Rhsim04G0196700 Rhododendron simsii HOM05D004596 ORTHO05D005853 1.9e-27 126.3 86 64.0
Cc03_g04360 Coffea canephora HOM05D004596 ORTHO05D005853 2.5e-27 125.9 86 64.0
BcaC07g42199 Brassica carinata HOM05D004596 ORTHO05D005853 4.2e-27 125.2 88 65.9
PSO461G0024 Papaver somniferum HOM05D004596 ORTHO05D005853 4.2e-27 125.2 87 63.2
Sabra08G0120900 Salix brachista HOM05D004596 ORTHO05D005853 4.2e-27 125.2 86 64.0
Potri.008G158600 Populus trichocarpa HOM05D004596 ORTHO05D005853 5.5e-27 124.8 86 64.0
Migut.N00215 Erythranthe guttata HOM05D004596 ORTHO05D005853 7.2e-27 124.4 86 61.6
Hund20642 Selenicereus undatus HOM05D004596 ORTHO05D005853 9.4e-27 124.0 88 60.2
ATR0665G133 Amborella trichopoda HOM05D004596 ORTHO05D005853 1.2e-26 123.6 86 62.8
FvH4_4g29700 Fragaria vesca HOM05D004596 ORTHO05D005853 1.2e-26 123.6 86 62.8
FAN07G2222 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.2e-26 123.6 86 62.8
FAN12G3612 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.2e-26 123.6 86 62.8
PSO210G2132 Papaver somniferum HOM05D004596 ORTHO05D005853 1.2e-26 123.6 87 63.2
SHI30650 Sapria himalayana HOM05D004596 ORTHO05D005853 1.2e-26 123.6 73 76.7
RcHm_v2.0_Chr4g0437941 Rosa chinensis HOM05D004596 ORTHO05D005853 2.1e-26 122.9 86 61.6
MSTRG.4066 Avicennia marina HOM05D004596 ORTHO05D005853 2.7e-26 122.5 86 62.8
ECA234G3873 Erigeron canadensis HOM05D004596 ORTHO05D005853 2.7e-26 122.5 86 64.0
FAN17G0232 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.7e-26 122.5 86 61.6
A09p67970 Brassica napus HOM05D004596 ORTHO05D005853 3.6e-26 122.1 87 65.5
FAN22G1518 Fragaria x ananassa HOM05D004596 ORTHO05D005853 3.6e-26 122.1 86 61.6
C08p52390 Brassica napus HOM05D004596 ORTHO05D005853 4.7e-26 121.7 87 64.4
BolC8t52768H Brassica oleracea HOM05D004596 ORTHO05D005853 4.7e-26 121.7 87 64.4
Lj5g0008006 Lotus japonicus HOM05D004596 ORTHO05D005853 6.1e-26 121.3 86 60.5
SEGI_30385 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 6.1e-26 121.3 86 61.6
HPP92_023539 Vanilla planifolia HOM05D004596 ORTHO05D005853 6.1e-26 121.3 86 65.1
Glyma.10G243000 Glycine max HOM05D004596 ORTHO05D005853 8.0e-26 120.9 86 61.6
Psat7g206760 Pisum sativum HOM05D004596 ORTHO05D005853 1.0e-25 120.6 86 61.6
SEGI_05896 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 1.4e-25 120.2 86 60.5
Medtr4g068740 Medicago truncatula HOM05D004596 ORTHO05D005853 1.8e-25 119.8 86 60.5
Ca_20830_v3 Cicer arietinum L. HOM05D004596 ORTHO05D005853 3.0e-25 119.0 86 60.5
Lalb_Chr02g0140731 Lupinus albus HOM05D004596 ORTHO05D005853 3.0e-25 119.0 86 62.8
TPR.G29898 Trifolium pratense HOM05D004596 ORTHO05D005853 3.0e-25 119.0 86 60.5
arahy.Tifrunner.gnm1.ann1.B8VWLB Arachis hypogaea HOM05D004596 ORTHO05D005853 4.0e-25 118.6 86 60.5
arahy.Tifrunner.gnm1.ann1.0IB5VB Arachis hypogaea HOM05D004596 ORTHO05D005853 6.8e-25 117.9 86 60.5
Glyma.20G151300 Glycine max HOM05D004596 ORTHO05D005853 6.8e-25 117.9 86 59.3
VMungo0720G1744 Vigna mungo HOM05D004596 ORTHO05D005853 2.6e-24 115.9 86 58.1
SHI01996 Sapria himalayana HOM05D004596 ORTHO05D005853 4.4e-24 115.2 68 76.5
Os03g0744300 Oryza sativa ssp. japonica HOM05D004596 ORTHO05D005853 1.3e-23 113.6 86 61.6
Phvul.007G062700 Phaseolus vulgaris HOM05D004596 ORTHO05D005853 1.3e-23 113.6 86 57.0
Lsat_1_v5_gn_5_103320 Lactuca sativa HOM05D004596 ORTHO05D005853 8.3e-23 110.9 86 57.0
Glyma.14G105001 Glycine max HOM05D004596 ORTHO05D005853 1.1e-22 110.5 79 60.8
Zm00001eb056920 Zea mays HOM05D004596 ORTHO05D005853 1.1e-22 110.5 86 58.1
CDE06G0929 Ceratophyllum demersum HOM05D004596 ORTHO05D005853 2.4e-22 109.4 73 63.0
Glyma.10G111500 Glycine max HOM05D004596 ORTHO05D005853 1.6e-21 106.7 80 57.5
Pp3c8_22390 Physcomitrium patens HOM05D004596 ORTHO05D005853 1.6e-21 106.7 87 59.8
Mapoly0005s0269 Marchantia polymorpha HOM05D004596 ORTHO05D005853 3.8e-20 102.1 88 56.8
SMO118G0545 Selaginella moellendorffii HOM05D004596 ORTHO05D005853 1.1e-19 100.5 86 54.7
SHI28614 Sapria himalayana HOM05D004596 ORTHO05D005853 1.5e-19 100.1 67 71.6
SHI29095 Sapria himalayana HOM05D004596 ORTHO05D005853 2.5e-19 99.4 63 74.6
SHI24701 Sapria himalayana HOM05D004596 ORTHO05D005853 4.9e-15 85.1 46 80.4
Lsat_1_v5_gn_1_72981 Lactuca sativa HOM05D004596 ORTHO05D005853 6.8e-09 64.7 58 50.0
CBR_g34713 Chara braunii HOM05D004596 ORTHO05D005853 1.3e-07 60.5 146 29.5
SHI17182 Sapria himalayana HOM05D000004 ORTHO05D367797 6.4e-07 58.2 34 85.3


User provided reference genes

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